Experiment: Galactomannan from guar 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03843 and BACOVA_03844 are separated by 3 nucleotides BACOVA_03844 and BACOVA_03845 are separated by 346 nucleotides BACOVA_03845 and BACOVA_03846 are separated by 327 nucleotides
BACOVA_03843: BACOVA_03843 - DJ-1/PfpI family protein, at 190,784 to 191,317
_03843
BACOVA_03844: BACOVA_03844 - hypothetical protein, at 191,321 to 191,470
_03844
BACOVA_03845: BACOVA_03845 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 191,817 to 193,421
_03845
BACOVA_03846: BACOVA_03846 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 193,749 to 196,727
_03846
Position (kb) 191
192
193
194 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 190.843 kb on - strand, within BACOVA_03843 at 190.851 kb on - strand, within BACOVA_03843 at 190.885 kb on + strand, within BACOVA_03843 at 190.885 kb on + strand, within BACOVA_03843 at 190.919 kb on - strand, within BACOVA_03843 at 190.964 kb on - strand, within BACOVA_03843 at 191.022 kb on + strand, within BACOVA_03843 at 191.029 kb on - strand, within BACOVA_03843 at 191.029 kb on - strand, within BACOVA_03843 at 191.055 kb on - strand, within BACOVA_03843 at 191.061 kb on + strand, within BACOVA_03843 at 191.061 kb on + strand, within BACOVA_03843 at 191.173 kb on - strand, within BACOVA_03843 at 191.191 kb on + strand, within BACOVA_03843 at 191.218 kb on + strand, within BACOVA_03843 at 191.225 kb on - strand, within BACOVA_03843 at 191.238 kb on + strand, within BACOVA_03843 at 191.239 kb on - strand, within BACOVA_03843 at 191.336 kb on - strand, within BACOVA_03844 at 191.350 kb on - strand, within BACOVA_03844 at 191.360 kb on - strand, within BACOVA_03844 at 191.370 kb on - strand, within BACOVA_03844 at 191.500 kb on + strand at 191.616 kb on - strand at 191.639 kb on + strand at 191.640 kb on - strand at 191.645 kb on - strand at 191.736 kb on - strand at 191.738 kb on + strand at 191.738 kb on + strand at 191.816 kb on + strand at 191.816 kb on + strand at 191.817 kb on - strand at 191.888 kb on + strand at 191.889 kb on - strand at 191.915 kb on + strand at 191.915 kb on + strand at 191.932 kb on - strand at 191.935 kb on - strand at 191.935 kb on - strand at 191.943 kb on - strand at 191.986 kb on - strand, within BACOVA_03845 at 191.989 kb on + strand, within BACOVA_03845 at 191.990 kb on - strand, within BACOVA_03845 at 192.096 kb on + strand, within BACOVA_03845 at 192.097 kb on - strand, within BACOVA_03845 at 192.133 kb on + strand, within BACOVA_03845 at 192.133 kb on + strand, within BACOVA_03845 at 192.134 kb on - strand, within BACOVA_03845 at 192.150 kb on + strand, within BACOVA_03845 at 192.150 kb on + strand, within BACOVA_03845 at 192.170 kb on - strand, within BACOVA_03845 at 192.241 kb on + strand, within BACOVA_03845 at 192.242 kb on - strand, within BACOVA_03845 at 192.305 kb on - strand, within BACOVA_03845 at 192.318 kb on + strand, within BACOVA_03845 at 192.319 kb on - strand, within BACOVA_03845 at 192.320 kb on + strand, within BACOVA_03845 at 192.321 kb on - strand, within BACOVA_03845 at 192.321 kb on - strand, within BACOVA_03845 at 192.321 kb on - strand, within BACOVA_03845 at 192.368 kb on + strand, within BACOVA_03845 at 192.368 kb on + strand, within BACOVA_03845 at 192.369 kb on - strand, within BACOVA_03845 at 192.387 kb on + strand, within BACOVA_03845 at 192.392 kb on - strand, within BACOVA_03845 at 192.413 kb on + strand, within BACOVA_03845 at 192.414 kb on - strand, within BACOVA_03845 at 192.414 kb on - strand, within BACOVA_03845 at 192.414 kb on - strand, within BACOVA_03845 at 192.414 kb on - strand, within BACOVA_03845 at 192.418 kb on + strand, within BACOVA_03845 at 192.418 kb on + strand, within BACOVA_03845 at 192.418 kb on + strand, within BACOVA_03845 at 192.419 kb on - strand, within BACOVA_03845 at 192.419 kb on - strand, within BACOVA_03845 at 192.421 kb on - strand, within BACOVA_03845 at 192.434 kb on + strand, within BACOVA_03845 at 192.448 kb on - strand, within BACOVA_03845 at 192.493 kb on + strand, within BACOVA_03845 at 192.495 kb on + strand, within BACOVA_03845 at 192.495 kb on + strand, within BACOVA_03845 at 192.497 kb on + strand, within BACOVA_03845 at 192.497 kb on + strand, within BACOVA_03845 at 192.498 kb on - strand, within BACOVA_03845 at 192.498 kb on - strand, within BACOVA_03845 at 192.504 kb on - strand, within BACOVA_03845 at 192.531 kb on - strand, within BACOVA_03845 at 192.545 kb on - strand, within BACOVA_03845 at 192.571 kb on + strand, within BACOVA_03845 at 192.572 kb on - strand, within BACOVA_03845 at 192.572 kb on - strand, within BACOVA_03845 at 192.572 kb on - strand, within BACOVA_03845 at 192.572 kb on - strand, within BACOVA_03845 at 192.574 kb on - strand, within BACOVA_03845 at 192.574 kb on - strand, within BACOVA_03845 at 192.700 kb on + strand, within BACOVA_03845 at 192.712 kb on + strand, within BACOVA_03845 at 192.713 kb on - strand, within BACOVA_03845 at 192.713 kb on - strand, within BACOVA_03845 at 192.713 kb on - strand, within BACOVA_03845 at 192.864 kb on + strand, within BACOVA_03845 at 192.864 kb on + strand, within BACOVA_03845 at 192.865 kb on - strand, within BACOVA_03845 at 192.929 kb on - strand, within BACOVA_03845 at 192.998 kb on + strand, within BACOVA_03845 at 192.998 kb on + strand, within BACOVA_03845 at 193.003 kb on + strand, within BACOVA_03845 at 193.003 kb on + strand, within BACOVA_03845 at 193.011 kb on + strand, within BACOVA_03845 at 193.018 kb on + strand, within BACOVA_03845 at 193.028 kb on + strand, within BACOVA_03845 at 193.029 kb on - strand, within BACOVA_03845 at 193.042 kb on + strand, within BACOVA_03845 at 193.042 kb on + strand, within BACOVA_03845 at 193.071 kb on + strand, within BACOVA_03845 at 193.077 kb on + strand, within BACOVA_03845 at 193.077 kb on + strand, within BACOVA_03845 at 193.077 kb on + strand, within BACOVA_03845 at 193.078 kb on - strand, within BACOVA_03845 at 193.145 kb on + strand, within BACOVA_03845 at 193.301 kb on - strand at 193.402 kb on - strand at 193.412 kb on - strand at 193.412 kb on - strand at 193.412 kb on - strand at 193.412 kb on - strand at 193.412 kb on - strand at 193.412 kb on - strand at 193.412 kb on - strand at 193.412 kb on - strand at 193.510 kb on - strand at 193.541 kb on - strand at 193.543 kb on + strand at 193.599 kb on - strand at 193.599 kb on - strand at 193.607 kb on + strand at 193.607 kb on + strand at 193.636 kb on + strand at 193.654 kb on + strand at 193.654 kb on + strand at 193.698 kb on + strand at 193.722 kb on - strand at 193.770 kb on + strand at 193.792 kb on + strand at 193.800 kb on + strand at 193.822 kb on + strand at 193.823 kb on - strand at 193.823 kb on - strand at 193.823 kb on - strand at 193.823 kb on - strand at 193.823 kb on - strand at 193.898 kb on + strand at 193.898 kb on + strand at 193.906 kb on + strand at 193.909 kb on + strand at 193.930 kb on + strand at 193.931 kb on - strand at 193.976 kb on - strand at 193.979 kb on - strand at 193.979 kb on - strand at 193.979 kb on - strand at 193.996 kb on - strand at 194.017 kb on - strand at 194.080 kb on - strand, within BACOVA_03846 at 194.096 kb on - strand, within BACOVA_03846 at 194.109 kb on + strand, within BACOVA_03846 at 194.112 kb on - strand, within BACOVA_03846 at 194.114 kb on + strand, within BACOVA_03846 at 194.123 kb on + strand, within BACOVA_03846 at 194.124 kb on - strand, within BACOVA_03846 at 194.124 kb on - strand, within BACOVA_03846 at 194.124 kb on - strand, within BACOVA_03846 at 194.153 kb on + strand, within BACOVA_03846 at 194.253 kb on + strand, within BACOVA_03846 at 194.294 kb on - strand, within BACOVA_03846 at 194.308 kb on - strand, within BACOVA_03846 at 194.308 kb on - strand, within BACOVA_03846 at 194.355 kb on + strand, within BACOVA_03846 at 194.386 kb on + strand, within BACOVA_03846 at 194.387 kb on - strand, within BACOVA_03846 at 194.387 kb on - strand, within BACOVA_03846 at 194.404 kb on + strand, within BACOVA_03846 at 194.405 kb on - strand, within BACOVA_03846 at 194.407 kb on + strand, within BACOVA_03846 at 194.408 kb on - strand, within BACOVA_03846
Per-strain Table
Position Strand Gene LocusTag Fraction Galactomannan from guar 2.5 mg/mL (C) remove 190,843 - BACOVA_03843 0.11 -0.2 190,851 - BACOVA_03843 0.13 -0.3 190,885 + BACOVA_03843 0.19 +0.3 190,885 + BACOVA_03843 0.19 -0.8 190,919 - BACOVA_03843 0.25 -0.4 190,964 - BACOVA_03843 0.34 -0.8 191,022 + BACOVA_03843 0.45 +0.2 191,029 - BACOVA_03843 0.46 -0.3 191,029 - BACOVA_03843 0.46 -0.7 191,055 - BACOVA_03843 0.51 -0.7 191,061 + BACOVA_03843 0.52 +0.1 191,061 + BACOVA_03843 0.52 +1.9 191,173 - BACOVA_03843 0.73 +0.3 191,191 + BACOVA_03843 0.76 -0.2 191,218 + BACOVA_03843 0.81 +0.6 191,225 - BACOVA_03843 0.83 +1.0 191,238 + BACOVA_03843 0.85 -0.4 191,239 - BACOVA_03843 0.85 -0.7 191,336 - BACOVA_03844 0.10 +0.6 191,350 - BACOVA_03844 0.19 -0.1 191,360 - BACOVA_03844 0.26 +0.7 191,370 - BACOVA_03844 0.33 -1.0 191,500 + +1.5 191,616 - +0.1 191,639 + -0.8 191,640 - -1.1 191,645 - -1.1 191,736 - +1.4 191,738 + -0.1 191,738 + +0.1 191,816 + -1.1 191,816 + -0.2 191,817 - -0.7 191,888 + -0.0 191,889 - -0.3 191,915 + -0.9 191,915 + -0.2 191,932 - -1.1 191,935 - +0.0 191,935 - -0.8 191,943 - -1.3 191,986 - BACOVA_03845 0.11 -1.1 191,989 + BACOVA_03845 0.11 -0.5 191,990 - BACOVA_03845 0.11 +0.0 192,096 + BACOVA_03845 0.17 -1.6 192,097 - BACOVA_03845 0.17 +0.3 192,133 + BACOVA_03845 0.20 +0.1 192,133 + BACOVA_03845 0.20 +0.5 192,134 - BACOVA_03845 0.20 +0.3 192,150 + BACOVA_03845 0.21 +0.5 192,150 + BACOVA_03845 0.21 -0.9 192,170 - BACOVA_03845 0.22 -0.9 192,241 + BACOVA_03845 0.26 +1.9 192,242 - BACOVA_03845 0.26 +1.3 192,305 - BACOVA_03845 0.30 -0.2 192,318 + BACOVA_03845 0.31 +0.7 192,319 - BACOVA_03845 0.31 +1.3 192,320 + BACOVA_03845 0.31 +1.3 192,321 - BACOVA_03845 0.31 +0.4 192,321 - BACOVA_03845 0.31 -0.5 192,321 - BACOVA_03845 0.31 -1.5 192,368 + BACOVA_03845 0.34 -0.6 192,368 + BACOVA_03845 0.34 -0.5 192,369 - BACOVA_03845 0.34 +1.1 192,387 + BACOVA_03845 0.36 +0.4 192,392 - BACOVA_03845 0.36 -0.9 192,413 + BACOVA_03845 0.37 +0.5 192,414 - BACOVA_03845 0.37 -0.7 192,414 - BACOVA_03845 0.37 +0.3 192,414 - BACOVA_03845 0.37 -0.7 192,414 - BACOVA_03845 0.37 +0.2 192,418 + BACOVA_03845 0.37 -0.4 192,418 + BACOVA_03845 0.37 -0.6 192,418 + BACOVA_03845 0.37 -0.8 192,419 - BACOVA_03845 0.38 -0.1 192,419 - BACOVA_03845 0.38 -1.6 192,421 - BACOVA_03845 0.38 +1.2 192,434 + BACOVA_03845 0.38 -0.4 192,448 - BACOVA_03845 0.39 -0.4 192,493 + BACOVA_03845 0.42 +0.7 192,495 + BACOVA_03845 0.42 -0.2 192,495 + BACOVA_03845 0.42 +0.5 192,497 + BACOVA_03845 0.42 +0.1 192,497 + BACOVA_03845 0.42 -0.2 192,498 - BACOVA_03845 0.42 -0.4 192,498 - BACOVA_03845 0.42 -0.7 192,504 - BACOVA_03845 0.43 -0.4 192,531 - BACOVA_03845 0.44 -0.0 192,545 - BACOVA_03845 0.45 +0.4 192,571 + BACOVA_03845 0.47 -1.4 192,572 - BACOVA_03845 0.47 +1.3 192,572 - BACOVA_03845 0.47 +1.3 192,572 - BACOVA_03845 0.47 -1.3 192,572 - BACOVA_03845 0.47 +0.3 192,574 - BACOVA_03845 0.47 +0.3 192,574 - BACOVA_03845 0.47 -0.1 192,700 + BACOVA_03845 0.55 -1.2 192,712 + BACOVA_03845 0.56 -0.3 192,713 - BACOVA_03845 0.56 -0.1 192,713 - BACOVA_03845 0.56 -0.4 192,713 - BACOVA_03845 0.56 +1.2 192,864 + BACOVA_03845 0.65 +1.1 192,864 + BACOVA_03845 0.65 -1.3 192,865 - BACOVA_03845 0.65 -0.7 192,929 - BACOVA_03845 0.69 -0.6 192,998 + BACOVA_03845 0.74 -0.7 192,998 + BACOVA_03845 0.74 -0.7 193,003 + BACOVA_03845 0.74 +0.4 193,003 + BACOVA_03845 0.74 -0.3 193,011 + BACOVA_03845 0.74 -0.3 193,018 + BACOVA_03845 0.75 -0.3 193,028 + BACOVA_03845 0.75 -0.0 193,029 - BACOVA_03845 0.76 -0.2 193,042 + BACOVA_03845 0.76 -0.1 193,042 + BACOVA_03845 0.76 -0.4 193,071 + BACOVA_03845 0.78 -1.2 193,077 + BACOVA_03845 0.79 -0.0 193,077 + BACOVA_03845 0.79 -0.2 193,077 + BACOVA_03845 0.79 -0.6 193,078 - BACOVA_03845 0.79 -1.1 193,145 + BACOVA_03845 0.83 +0.7 193,301 - -0.7 193,402 - -0.5 193,412 - +0.5 193,412 - -1.9 193,412 - -0.8 193,412 - -0.9 193,412 - -1.7 193,412 - -1.5 193,412 - -1.9 193,412 - -0.6 193,510 - -3.7 193,541 - -2.6 193,543 + +1.0 193,599 - -1.7 193,599 - -2.3 193,607 + -3.1 193,607 + -4.1 193,636 + -1.1 193,654 + -2.5 193,654 + -1.2 193,698 + -1.5 193,722 - -4.2 193,770 + +0.6 193,792 + -0.8 193,800 + -0.7 193,822 + -2.3 193,823 - -3.2 193,823 - -2.1 193,823 - -3.9 193,823 - -2.0 193,823 - -3.1 193,898 + -2.3 193,898 + -2.9 193,906 + -2.0 193,909 + -0.4 193,930 + -1.5 193,931 - -1.1 193,976 - -3.3 193,979 - -3.5 193,979 - -0.7 193,979 - -3.3 193,996 - -0.9 194,017 - -4.4 194,080 - BACOVA_03846 0.11 -3.3 194,096 - BACOVA_03846 0.12 -3.2 194,109 + BACOVA_03846 0.12 -0.3 194,112 - BACOVA_03846 0.12 -1.5 194,114 + BACOVA_03846 0.12 -0.3 194,123 + BACOVA_03846 0.13 -0.1 194,124 - BACOVA_03846 0.13 -2.5 194,124 - BACOVA_03846 0.13 -3.1 194,124 - BACOVA_03846 0.13 -0.9 194,153 + BACOVA_03846 0.14 -0.9 194,253 + BACOVA_03846 0.17 -3.9 194,294 - BACOVA_03846 0.18 -1.7 194,308 - BACOVA_03846 0.19 -2.1 194,308 - BACOVA_03846 0.19 -4.4 194,355 + BACOVA_03846 0.20 -2.5 194,386 + BACOVA_03846 0.21 -3.7 194,387 - BACOVA_03846 0.21 -3.1 194,387 - BACOVA_03846 0.21 -3.3 194,404 + BACOVA_03846 0.22 -1.6 194,405 - BACOVA_03846 0.22 -2.3 194,407 + BACOVA_03846 0.22 -1.9 194,408 - BACOVA_03846 0.22 -2.3
Or see this region's nucleotide sequence