Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16165

Experiment: R2A_PIPES with Cobalt chloride 1024 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cobalt chloride 1024 uM
3,546,021	+	icdM	OKGIIK_16160	0.68	-1.4
3,546,021	+	icdM	OKGIIK_16160	0.68	-0.4
3,546,021	+	icdM	OKGIIK_16160	0.68	-0.6
3,546,021	+	icdM	OKGIIK_16160	0.68	-0.8
3,546,021	+	icdM	OKGIIK_16160	0.68	+1.2
3,546,021	+	icdM	OKGIIK_16160	0.68	+1.4
3,546,022	-	icdM	OKGIIK_16160	0.68	-0.1
3,546,022	-	icdM	OKGIIK_16160	0.68	-2.4
3,546,022	-	icdM	OKGIIK_16160	0.68	-1.1
3,546,022	-	icdM	OKGIIK_16160	0.68	-2.0
3,546,142	-	icdM	OKGIIK_16160	0.74	+0.9
3,546,142	-	icdM	OKGIIK_16160	0.74	-0.1
3,546,142	-	icdM	OKGIIK_16160	0.74	-1.3
3,546,142	-	icdM	OKGIIK_16160	0.74	-0.3
3,546,142	-	icdM	OKGIIK_16160	0.74	+0.8
3,546,288	+	icdM	OKGIIK_16160	0.80	+1.1
3,546,288	+	icdM	OKGIIK_16160	0.80	-0.2
3,546,288	+	icdM	OKGIIK_16160	0.80	+1.9
3,546,288	+	icdM	OKGIIK_16160	0.80	+0.9
3,546,288	+	icdM	OKGIIK_16160	0.80	-0.4
3,546,288	+	icdM	OKGIIK_16160	0.80	-0.6
3,546,288	+	icdM	OKGIIK_16160	0.80	-0.1
3,546,288	+	icdM	OKGIIK_16160	0.80	+1.2
3,546,288	+	icdM	OKGIIK_16160	0.80	+0.8
3,546,289	-	icdM	OKGIIK_16160	0.80	-1.1
3,546,289	-	icdM	OKGIIK_16160	0.80	-0.2
3,546,289	-	icdM	OKGIIK_16160	0.80	-0.1
3,546,289	-	icdM	OKGIIK_16160	0.80	-0.1
3,546,289	-	icdM	OKGIIK_16160	0.80	-0.1
3,546,480	+	icdM	OKGIIK_16160	0.89	-1.2
3,546,480	+	icdM	OKGIIK_16160	0.89	-0.4
3,546,480	+	icdM	OKGIIK_16160	0.89	-1.2
3,546,481	-	icdM	OKGIIK_16160	0.89	+0.9
3,546,481	-	icdM	OKGIIK_16160	0.89	-2.5
3,546,492	+	icdM	OKGIIK_16160	0.89	-2.1
3,546,492	+	icdM	OKGIIK_16160	0.89	+1.5
3,546,493	-	icdM	OKGIIK_16160	0.90	-0.9
3,546,493	-	icdM	OKGIIK_16160	0.90	-0.7
3,546,642	+				-1.0
3,546,642	+				-0.1
3,546,642	+				+1.5
3,546,643	-				-0.9
3,546,643	-				-0.9
3,546,643	-				-0.3
3,546,643	-				+0.4
3,546,643	-				-0.3
3,546,643	-				-3.0
3,546,643	-				-0.1
3,546,643	-				-1.1
3,546,643	-				-0.4
3,546,643	-				-0.1
3,546,643	-				-1.2
3,547,016	+		OKGIIK_16165	0.15	-0.3
3,547,016	+		OKGIIK_16165	0.15	+0.4
3,547,016	+		OKGIIK_16165	0.15	-0.6
3,547,016	+		OKGIIK_16165	0.15	-2.0
3,547,017	-		OKGIIK_16165	0.15	-1.2
3,547,017	-		OKGIIK_16165	0.15	-1.8
3,547,017	-		OKGIIK_16165	0.15	-2.0
3,547,017	-		OKGIIK_16165	0.15	+0.5
3,547,017	-		OKGIIK_16165	0.15	+0.4
3,547,201	+		OKGIIK_16165	0.33	-1.1
3,547,201	+		OKGIIK_16165	0.33	+0.8
3,547,202	-		OKGIIK_16165	0.33	+0.4
3,547,202	-		OKGIIK_16165	0.33	+0.6
3,547,202	-		OKGIIK_16165	0.33	-0.2
3,547,261	+		OKGIIK_16165	0.39	-0.9
3,547,261	+		OKGIIK_16165	0.39	-0.2
3,547,261	+		OKGIIK_16165	0.39	-1.2
3,547,261	+		OKGIIK_16165	0.39	-0.1
3,547,261	+		OKGIIK_16165	0.39	-0.2
3,547,261	+		OKGIIK_16165	0.39	+0.2
3,547,261	+		OKGIIK_16165	0.39	-0.4
3,547,261	+		OKGIIK_16165	0.39	+1.2
3,547,261	+		OKGIIK_16165	0.39	-2.6
3,547,261	+		OKGIIK_16165	0.39	-0.3
3,547,261	+		OKGIIK_16165	0.39	+0.5
3,547,261	+		OKGIIK_16165	0.39	-0.3
3,547,261	+		OKGIIK_16165	0.39	+1.5
3,547,261	+		OKGIIK_16165	0.39	-0.5
3,547,261	+		OKGIIK_16165	0.39	+1.1
3,547,261	+		OKGIIK_16165	0.39	+0.3
3,547,261	+		OKGIIK_16165	0.39	-1.3
3,547,261	+		OKGIIK_16165	0.39	-0.1
3,547,262	-		OKGIIK_16165	0.39	+1.9
3,547,262	-		OKGIIK_16165	0.39	-0.6
3,547,262	-		OKGIIK_16165	0.39	+0.0
3,547,262	-		OKGIIK_16165	0.39	-0.8
3,547,262	-		OKGIIK_16165	0.39	+1.5
3,547,262	-		OKGIIK_16165	0.39	+1.2
3,547,262	-		OKGIIK_16165	0.39	-0.9
3,547,262	-		OKGIIK_16165	0.39	-0.7
3,547,262	-		OKGIIK_16165	0.39	-0.1
3,547,291	+		OKGIIK_16165	0.42	+0.2
3,547,291	+		OKGIIK_16165	0.42	+0.5
3,547,291	+		OKGIIK_16165	0.42	+0.9
3,547,291	+		OKGIIK_16165	0.42	-0.1
3,547,291	+		OKGIIK_16165	0.42	+0.0
3,547,292	-		OKGIIK_16165	0.42	+0.4
3,547,292	-		OKGIIK_16165	0.42	-0.2
3,547,292	-		OKGIIK_16165	0.42	+0.2
3,547,292	-		OKGIIK_16165	0.42	-0.2
3,547,292	-		OKGIIK_16165	0.42	+0.9
3,547,351	+		OKGIIK_16165	0.48	-1.5
3,547,351	+		OKGIIK_16165	0.48	+0.2
3,547,351	+		OKGIIK_16165	0.48	+0.8
3,547,351	+		OKGIIK_16165	0.48	+0.2
3,547,351	+		OKGIIK_16165	0.48	+1.5
3,547,351	+		OKGIIK_16165	0.48	-0.6
3,547,351	+		OKGIIK_16165	0.48	-0.6
3,547,351	+		OKGIIK_16165	0.48	-1.4
3,547,351	+		OKGIIK_16165	0.48	+1.2
3,547,351	+		OKGIIK_16165	0.48	+1.4
3,547,352	-		OKGIIK_16165	0.48	+0.1
3,547,352	-		OKGIIK_16165	0.48	-0.6
3,547,352	-		OKGIIK_16165	0.48	-2.9
3,547,352	-		OKGIIK_16165	0.48	+1.3
3,547,352	-		OKGIIK_16165	0.48	-0.1
3,547,352	-		OKGIIK_16165	0.48	+0.3
3,547,352	-		OKGIIK_16165	0.48	-3.0
3,547,352	-		OKGIIK_16165	0.48	+1.6
3,547,457	-		OKGIIK_16165	0.59	-0.5
3,547,457	-		OKGIIK_16165	0.59	-0.7
3,547,457	-		OKGIIK_16165	0.59	-0.4
3,547,457	-		OKGIIK_16165	0.59	-1.1
3,547,457	-		OKGIIK_16165	0.59	+0.4
3,547,457	-		OKGIIK_16165	0.59	-1.5
3,547,819	+				+1.4
3,547,819	+				-0.3
3,547,820	-				-0.6
3,547,820	-				-0.8
3,547,846	+				+0.9
3,547,847	-				-0.6
3,547,924	+				-1.8
3,548,154	+	pdxI	OKGIIK_16170	0.20	+1.1
3,548,154	+	pdxI	OKGIIK_16170	0.20	+0.8
3,548,155	-	pdxI	OKGIIK_16170	0.20	-0.6
3,548,155	-	pdxI	OKGIIK_16170	0.20	-0.6
3,548,188	+	pdxI	OKGIIK_16170	0.24	+0.7
3,548,188	+	pdxI	OKGIIK_16170	0.24	-0.7
3,548,188	+	pdxI	OKGIIK_16170	0.24	-0.4
3,548,188	+	pdxI	OKGIIK_16170	0.24	-0.4
3,548,188	+	pdxI	OKGIIK_16170	0.24	+1.4
3,548,189	-	pdxI	OKGIIK_16170	0.24	+0.1
3,548,189	-	pdxI	OKGIIK_16170	0.24	-1.0
3,548,189	-	pdxI	OKGIIK_16170	0.24	+0.6
3,548,189	-	pdxI	OKGIIK_16170	0.24	-0.1
3,548,189	-	pdxI	OKGIIK_16170	0.24	-0.5
3,548,189	-	pdxI	OKGIIK_16170	0.24	+0.6
3,548,189	-	pdxI	OKGIIK_16170	0.24	+1.4
3,548,189	-	pdxI	OKGIIK_16170	0.24	+0.4
3,548,189	-	pdxI	OKGIIK_16170	0.24	-0.1
3,548,189	-	pdxI	OKGIIK_16170	0.24	-0.3
3,548,189	-	pdxI	OKGIIK_16170	0.24	-2.5
3,548,245	+	pdxI	OKGIIK_16170	0.30	-0.2
3,548,245	+	pdxI	OKGIIK_16170	0.30	+0.8
3,548,245	+	pdxI	OKGIIK_16170	0.30	-0.7
3,548,246	-	pdxI	OKGIIK_16170	0.30	-1.4
3,548,278	+	pdxI	OKGIIK_16170	0.33	+0.7
3,548,278	+	pdxI	OKGIIK_16170	0.33	-0.4
3,548,278	+	pdxI	OKGIIK_16170	0.33	+0.3
3,548,279	-	pdxI	OKGIIK_16170	0.34	-0.9
3,548,279	-	pdxI	OKGIIK_16170	0.34	+1.6
3,548,279	-	pdxI	OKGIIK_16170	0.34	-0.6
3,548,279	-	pdxI	OKGIIK_16170	0.34	-1.2
3,548,281	+	pdxI	OKGIIK_16170	0.34	-0.2
3,548,281	+	pdxI	OKGIIK_16170	0.34	-1.6
3,548,281	+	pdxI	OKGIIK_16170	0.34	-1.3
3,548,281	+	pdxI	OKGIIK_16170	0.34	-0.3
3,548,281	+	pdxI	OKGIIK_16170	0.34	-0.8
3,548,281	+	pdxI	OKGIIK_16170	0.34	-0.5
3,548,281	+	pdxI	OKGIIK_16170	0.34	+1.1
3,548,282	-	pdxI	OKGIIK_16170	0.34	-0.7
3,548,282	-	pdxI	OKGIIK_16170	0.34	-1.2
3,548,282	-	pdxI	OKGIIK_16170	0.34	-0.8
3,548,282	-	pdxI	OKGIIK_16170	0.34	+0.4
3,548,282	-	pdxI	OKGIIK_16170	0.34	-0.5
3,548,282	-	pdxI	OKGIIK_16170	0.34	-0.1
3,548,282	-	pdxI	OKGIIK_16170	0.34	-0.4
3,548,282	-	pdxI	OKGIIK_16170	0.34	-0.5
3,548,282	-	pdxI	OKGIIK_16170	0.34	+0.1
3,548,335	+	pdxI	OKGIIK_16170	0.39	+0.2
3,548,359	+	pdxI	OKGIIK_16170	0.42	-0.1
3,548,359	+	pdxI	OKGIIK_16170	0.42	+0.3
3,548,359	+	pdxI	OKGIIK_16170	0.42	-0.4
3,548,359	+	pdxI	OKGIIK_16170	0.42	+0.4
3,548,359	+	pdxI	OKGIIK_16170	0.42	-0.6
3,548,359	+	pdxI	OKGIIK_16170	0.42	-2.1
3,548,359	+	pdxI	OKGIIK_16170	0.42	-0.4
3,548,359	+	pdxI	OKGIIK_16170	0.42	-0.1
3,548,360	-	pdxI	OKGIIK_16170	0.42	-1.1
3,548,360	-	pdxI	OKGIIK_16170	0.42	+1.3
3,548,360	-	pdxI	OKGIIK_16170	0.42	-1.3
3,548,360	-	pdxI	OKGIIK_16170	0.42	-0.5
3,548,380	+	pdxI	OKGIIK_16170	0.44	+0.0
3,548,380	+	pdxI	OKGIIK_16170	0.44	-0.4
3,548,545	+	pdxI	OKGIIK_16170	0.62	+0.5
3,548,545	+	pdxI	OKGIIK_16170	0.62	-0.4
3,548,545	+	pdxI	OKGIIK_16170	0.62	-1.1
3,548,545	+	pdxI	OKGIIK_16170	0.62	+0.0
3,548,545	+	pdxI	OKGIIK_16170	0.62	-0.4
3,548,545	+	pdxI	OKGIIK_16170	0.62	+0.2
3,548,545	+	pdxI	OKGIIK_16170	0.62	-0.1
3,548,546	-	pdxI	OKGIIK_16170	0.62	-0.2
3,548,749	+	pdxI	OKGIIK_16170	0.83	-0.6
3,548,749	+	pdxI	OKGIIK_16170	0.83	-0.4
3,548,749	+	pdxI	OKGIIK_16170	0.83	+0.5
3,548,749	+	pdxI	OKGIIK_16170	0.83	-1.7
3,548,750	-	pdxI	OKGIIK_16170	0.83	-2.5
3,548,750	-	pdxI	OKGIIK_16170	0.83	-2.1