Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_03265

Experiment: R2A_PIPES with Cobalt chloride 1024 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_03255 and crcB are separated by 14 nucleotidescrcB and OKGIIK_03265 are separated by 342 nucleotidesOKGIIK_03265 and OKGIIK_03270 are separated by 13 nucleotides OKGIIK_03255: OKGIIK_03255 - DUF190 domain-containing protein, at 735,646 to 735,984 _03255 OKGIIK_03260: crcB - fluoride efflux transporter CrcB, at 735,999 to 736,385 crcB OKGIIK_03265: OKGIIK_03265 - hypothetical protein, at 736,728 to 737,171 _03265 OKGIIK_03270: OKGIIK_03270 - DUF2235 domain-containing protein, at 737,185 to 738,318 _03270 Position (kb) 736 737 738Strain fitness (log2 ratio) -2 -1 0 1 2at 735.941 kb on + strand, within OKGIIK_03255at 735.941 kb on + strand, within OKGIIK_03255at 735.941 kb on + strand, within OKGIIK_03255at 735.941 kb on + strand, within OKGIIK_03255at 735.941 kb on + strand, within OKGIIK_03255at 735.942 kb on - strand, within OKGIIK_03255at 735.942 kb on - strand, within OKGIIK_03255at 735.942 kb on - strand, within OKGIIK_03255at 735.947 kb on + strand, within OKGIIK_03255at 735.947 kb on + strand, within OKGIIK_03255at 735.947 kb on + strand, within OKGIIK_03255at 735.947 kb on + strand, within OKGIIK_03255at 735.947 kb on + strand, within OKGIIK_03255at 735.947 kb on + strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 735.948 kb on - strand, within OKGIIK_03255at 736.096 kb on + strand, within crcBat 736.096 kb on + strand, within crcBat 736.096 kb on + strand, within crcBat 736.096 kb on + strand, within crcBat 736.096 kb on + strand, within crcBat 736.097 kb on - strand, within crcBat 736.097 kb on - strand, within crcBat 736.097 kb on - strand, within crcBat 736.097 kb on - strand, within crcBat 736.097 kb on - strand, within crcBat 736.495 kb on + strandat 736.495 kb on + strandat 736.495 kb on + strandat 736.495 kb on + strandat 736.496 kb on - strandat 736.562 kb on + strandat 736.562 kb on + strandat 736.611 kb on + strandat 736.611 kb on + strandat 736.611 kb on + strandat 736.611 kb on + strandat 736.611 kb on + strandat 736.611 kb on + strandat 736.612 kb on - strandat 736.612 kb on - strandat 736.613 kb on + strandat 736.613 kb on + strandat 736.613 kb on + strandat 736.613 kb on + strandat 736.613 kb on + strandat 736.614 kb on - strandat 736.614 kb on - strandat 736.614 kb on - strandat 736.949 kb on - strand, within OKGIIK_03265at 737.082 kb on + strand, within OKGIIK_03265at 737.082 kb on + strand, within OKGIIK_03265at 737.083 kb on - strand, within OKGIIK_03265at 737.083 kb on - strand, within OKGIIK_03265at 737.083 kb on - strand, within OKGIIK_03265at 737.083 kb on - strand, within OKGIIK_03265at 737.083 kb on - strand, within OKGIIK_03265at 737.230 kb on + strandat 737.279 kb on + strandat 737.280 kb on - strandat 737.378 kb on + strand, within OKGIIK_03270at 737.378 kb on + strand, within OKGIIK_03270at 737.378 kb on + strand, within OKGIIK_03270at 737.378 kb on + strand, within OKGIIK_03270at 737.378 kb on + strand, within OKGIIK_03270at 737.378 kb on + strand, within OKGIIK_03270at 737.378 kb on + strand, within OKGIIK_03270at 737.378 kb on + strand, within OKGIIK_03270at 737.379 kb on - strand, within OKGIIK_03270at 737.379 kb on - strand, within OKGIIK_03270at 737.379 kb on - strand, within OKGIIK_03270at 737.379 kb on - strand, within OKGIIK_03270at 737.379 kb on - strand, within OKGIIK_03270at 737.379 kb on - strand, within OKGIIK_03270at 737.379 kb on - strand, within OKGIIK_03270at 737.379 kb on - strand, within OKGIIK_03270at 737.379 kb on - strand, within OKGIIK_03270at 737.402 kb on + strand, within OKGIIK_03270at 737.402 kb on + strand, within OKGIIK_03270at 737.402 kb on + strand, within OKGIIK_03270at 737.402 kb on + strand, within OKGIIK_03270at 737.403 kb on - strand, within OKGIIK_03270at 737.403 kb on - strand, within OKGIIK_03270at 737.403 kb on - strand, within OKGIIK_03270at 737.403 kb on - strand, within OKGIIK_03270at 737.464 kb on + strand, within OKGIIK_03270at 737.464 kb on + strand, within OKGIIK_03270at 737.654 kb on + strand, within OKGIIK_03270at 737.655 kb on - strand, within OKGIIK_03270at 737.721 kb on - strand, within OKGIIK_03270at 737.721 kb on - strand, within OKGIIK_03270at 737.721 kb on - strand, within OKGIIK_03270at 737.726 kb on + strand, within OKGIIK_03270at 737.726 kb on + strand, within OKGIIK_03270at 737.726 kb on + strand, within OKGIIK_03270at 737.726 kb on + strand, within OKGIIK_03270at 737.726 kb on + strand, within OKGIIK_03270at 737.726 kb on + strand, within OKGIIK_03270at 737.726 kb on + strand, within OKGIIK_03270at 737.726 kb on + strand, within OKGIIK_03270at 737.726 kb on + strand, within OKGIIK_03270at 737.727 kb on - strand, within OKGIIK_03270at 737.727 kb on - strand, within OKGIIK_03270at 737.727 kb on - strand, within OKGIIK_03270at 737.727 kb on - strand, within OKGIIK_03270at 737.727 kb on - strand, within OKGIIK_03270at 737.727 kb on - strand, within OKGIIK_03270at 737.765 kb on + strand, within OKGIIK_03270at 737.765 kb on + strand, within OKGIIK_03270at 737.765 kb on + strand, within OKGIIK_03270at 737.766 kb on - strand, within OKGIIK_03270at 737.766 kb on - strand, within OKGIIK_03270at 737.780 kb on + strand, within OKGIIK_03270at 737.780 kb on + strand, within OKGIIK_03270at 737.780 kb on + strand, within OKGIIK_03270at 737.781 kb on - strand, within OKGIIK_03270at 737.781 kb on - strand, within OKGIIK_03270at 737.826 kb on + strand, within OKGIIK_03270at 737.925 kb on - strand, within OKGIIK_03270at 737.933 kb on + strand, within OKGIIK_03270at 738.029 kb on + strand, within OKGIIK_03270at 738.030 kb on - strand, within OKGIIK_03270at 738.030 kb on - strand, within OKGIIK_03270at 738.030 kb on - strand, within OKGIIK_03270at 738.030 kb on - strand, within OKGIIK_03270at 738.030 kb on - strand, within OKGIIK_03270at 738.056 kb on + strand, within OKGIIK_03270at 738.056 kb on + strand, within OKGIIK_03270at 738.056 kb on + strand, within OKGIIK_03270at 738.056 kb on + strand, within OKGIIK_03270at 738.056 kb on + strand, within OKGIIK_03270at 738.056 kb on + strand, within OKGIIK_03270at 738.056 kb on + strand, within OKGIIK_03270at 738.056 kb on + strand, within OKGIIK_03270at 738.056 kb on + strand, within OKGIIK_03270at 738.057 kb on - strand, within OKGIIK_03270at 738.057 kb on - strand, within OKGIIK_03270at 738.057 kb on - strand, within OKGIIK_03270at 738.057 kb on - strand, within OKGIIK_03270

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A_PIPES with Cobalt chloride 1024 uM
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735,941 + OKGIIK_03255 0.87 -1.3
735,941 + OKGIIK_03255 0.87 -0.1
735,941 + OKGIIK_03255 0.87 +0.5
735,941 + OKGIIK_03255 0.87 +1.2
735,941 + OKGIIK_03255 0.87 -1.6
735,942 - OKGIIK_03255 0.87 -2.2
735,942 - OKGIIK_03255 0.87 +1.0
735,942 - OKGIIK_03255 0.87 +0.5
735,947 + OKGIIK_03255 0.89 -2.3
735,947 + OKGIIK_03255 0.89 +1.5
735,947 + OKGIIK_03255 0.89 +1.1
735,947 + OKGIIK_03255 0.89 -0.8
735,947 + OKGIIK_03255 0.89 +0.7
735,947 + OKGIIK_03255 0.89 +0.8
735,948 - OKGIIK_03255 0.89 +0.6
735,948 - OKGIIK_03255 0.89 -0.2
735,948 - OKGIIK_03255 0.89 -0.9
735,948 - OKGIIK_03255 0.89 -2.2
735,948 - OKGIIK_03255 0.89 +0.8
735,948 - OKGIIK_03255 0.89 -1.7
735,948 - OKGIIK_03255 0.89 +0.1
735,948 - OKGIIK_03255 0.89 -0.7
735,948 - OKGIIK_03255 0.89 -2.1
735,948 - OKGIIK_03255 0.89 -2.2
735,948 - OKGIIK_03255 0.89 -0.2
735,948 - OKGIIK_03255 0.89 -0.3
735,948 - OKGIIK_03255 0.89 -0.3
735,948 - OKGIIK_03255 0.89 +1.0
735,948 - OKGIIK_03255 0.89 -0.8
735,948 - OKGIIK_03255 0.89 -0.5
736,096 + crcB OKGIIK_03260 0.25 -0.9
736,096 + crcB OKGIIK_03260 0.25 +0.5
736,096 + crcB OKGIIK_03260 0.25 -0.2
736,096 + crcB OKGIIK_03260 0.25 -2.0
736,096 + crcB OKGIIK_03260 0.25 +0.0
736,097 - crcB OKGIIK_03260 0.25 +0.5
736,097 - crcB OKGIIK_03260 0.25 -1.0
736,097 - crcB OKGIIK_03260 0.25 -1.6
736,097 - crcB OKGIIK_03260 0.25 +0.3
736,097 - crcB OKGIIK_03260 0.25 -0.5
736,495 + +0.3
736,495 + +0.7
736,495 + -0.7
736,495 + -2.3
736,496 - -0.6
736,562 + +0.0
736,562 + -0.7
736,611 + +2.3
736,611 + +1.4
736,611 + -0.7
736,611 + -2.0
736,611 + +1.0
736,611 + -0.0
736,612 - -0.6
736,612 - -1.2
736,613 + +0.4
736,613 + -0.4
736,613 + +0.8
736,613 + +0.5
736,613 + +1.5
736,614 - +0.8
736,614 - +0.4
736,614 - -0.7
736,949 - OKGIIK_03265 0.50 +0.7
737,082 + OKGIIK_03265 0.80 -0.6
737,082 + OKGIIK_03265 0.80 -0.3
737,083 - OKGIIK_03265 0.80 -1.3
737,083 - OKGIIK_03265 0.80 -1.7
737,083 - OKGIIK_03265 0.80 +0.5
737,083 - OKGIIK_03265 0.80 -2.4
737,083 - OKGIIK_03265 0.80 +0.8
737,230 + +0.3
737,279 + +0.4
737,280 - +0.6
737,378 + OKGIIK_03270 0.17 -1.7
737,378 + OKGIIK_03270 0.17 +0.3
737,378 + OKGIIK_03270 0.17 -0.2
737,378 + OKGIIK_03270 0.17 +0.8
737,378 + OKGIIK_03270 0.17 -0.2
737,378 + OKGIIK_03270 0.17 +0.3
737,378 + OKGIIK_03270 0.17 +0.4
737,378 + OKGIIK_03270 0.17 -0.7
737,379 - OKGIIK_03270 0.17 -2.0
737,379 - OKGIIK_03270 0.17 +1.3
737,379 - OKGIIK_03270 0.17 -1.2
737,379 - OKGIIK_03270 0.17 -0.5
737,379 - OKGIIK_03270 0.17 -0.7
737,379 - OKGIIK_03270 0.17 -0.2
737,379 - OKGIIK_03270 0.17 +1.0
737,379 - OKGIIK_03270 0.17 -1.2
737,379 - OKGIIK_03270 0.17 -0.3
737,402 + OKGIIK_03270 0.19 -0.3
737,402 + OKGIIK_03270 0.19 -0.0
737,402 + OKGIIK_03270 0.19 +0.5
737,402 + OKGIIK_03270 0.19 -1.2
737,403 - OKGIIK_03270 0.19 +1.6
737,403 - OKGIIK_03270 0.19 -0.9
737,403 - OKGIIK_03270 0.19 +1.4
737,403 - OKGIIK_03270 0.19 +0.6
737,464 + OKGIIK_03270 0.25 -1.6
737,464 + OKGIIK_03270 0.25 +0.6
737,654 + OKGIIK_03270 0.41 +0.6
737,655 - OKGIIK_03270 0.41 +0.9
737,721 - OKGIIK_03270 0.47 +0.8
737,721 - OKGIIK_03270 0.47 -0.2
737,721 - OKGIIK_03270 0.47 -0.9
737,726 + OKGIIK_03270 0.48 +1.0
737,726 + OKGIIK_03270 0.48 -0.5
737,726 + OKGIIK_03270 0.48 +0.5
737,726 + OKGIIK_03270 0.48 -0.2
737,726 + OKGIIK_03270 0.48 -0.2
737,726 + OKGIIK_03270 0.48 -1.2
737,726 + OKGIIK_03270 0.48 -0.6
737,726 + OKGIIK_03270 0.48 +0.1
737,726 + OKGIIK_03270 0.48 -0.5
737,727 - OKGIIK_03270 0.48 -1.1
737,727 - OKGIIK_03270 0.48 -0.3
737,727 - OKGIIK_03270 0.48 +0.0
737,727 - OKGIIK_03270 0.48 -0.7
737,727 - OKGIIK_03270 0.48 +0.1
737,727 - OKGIIK_03270 0.48 -2.6
737,765 + OKGIIK_03270 0.51 +0.7
737,765 + OKGIIK_03270 0.51 +0.3
737,765 + OKGIIK_03270 0.51 +0.2
737,766 - OKGIIK_03270 0.51 +0.8
737,766 - OKGIIK_03270 0.51 -0.3
737,780 + OKGIIK_03270 0.52 +0.5
737,780 + OKGIIK_03270 0.52 -1.7
737,780 + OKGIIK_03270 0.52 +0.8
737,781 - OKGIIK_03270 0.53 +0.3
737,781 - OKGIIK_03270 0.53 -1.4
737,826 + OKGIIK_03270 0.57 -1.3
737,925 - OKGIIK_03270 0.65 +1.3
737,933 + OKGIIK_03270 0.66 +0.8
738,029 + OKGIIK_03270 0.74 +0.3
738,030 - OKGIIK_03270 0.75 +0.4
738,030 - OKGIIK_03270 0.75 +0.6
738,030 - OKGIIK_03270 0.75 +0.3
738,030 - OKGIIK_03270 0.75 -0.5
738,030 - OKGIIK_03270 0.75 +0.8
738,056 + OKGIIK_03270 0.77 -0.7
738,056 + OKGIIK_03270 0.77 +1.5
738,056 + OKGIIK_03270 0.77 -1.3
738,056 + OKGIIK_03270 0.77 +1.1
738,056 + OKGIIK_03270 0.77 -0.9
738,056 + OKGIIK_03270 0.77 -0.3
738,056 + OKGIIK_03270 0.77 +0.7
738,056 + OKGIIK_03270 0.77 -1.2
738,056 + OKGIIK_03270 0.77 -1.2
738,057 - OKGIIK_03270 0.77 +0.1
738,057 - OKGIIK_03270 0.77 -1.3
738,057 - OKGIIK_03270 0.77 +0.2
738,057 - OKGIIK_03270 0.77 -1.2

Or see this region's nucleotide sequence