Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05988

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
142,073	+				+0.2
142,073	+				-1.0
142,073	+				-1.1
142,073	+				+0.3
142,074	-				-0.8
142,074	-				-0.8
142,121	+				-1.4
142,190	-				+0.3
142,190	-				-1.3
142,190	-				-1.7
142,190	-				-1.4
142,192	+				-0.3
142,192	+				-1.3
142,192	+				-1.3
142,192	+				-0.6
142,192	+				+1.2
142,192	+				-0.8
142,192	+				-0.7
142,192	+				-0.8
142,192	+				+0.2
142,192	+				+0.1
142,192	+				+0.7
142,192	+				-1.6
142,192	+				-2.4
142,192	+				-1.0
142,192	+				-0.3
142,192	+				+1.4
142,193	-				-0.6
142,193	-				-0.6
142,193	-				+0.7
142,193	-				-0.5
142,193	-				-1.1
142,193	-				-0.4
142,193	-				-1.4
142,261	+				-0.7
142,436	+		MPMX19_05987	0.38	-0.8
142,436	+		MPMX19_05987	0.38	-0.6
142,436	+		MPMX19_05987	0.38	-0.1
142,436	+		MPMX19_05987	0.38	-0.8
142,437	-		MPMX19_05987	0.38	-0.6
142,437	-		MPMX19_05987	0.38	-0.3
142,437	-		MPMX19_05987	0.38	-1.3
142,437	-		MPMX19_05987	0.38	-0.8
142,508	+		MPMX19_05987	0.55	-0.3
142,509	-		MPMX19_05987	0.55	-0.7
142,586	+		MPMX19_05987	0.73	-0.4
142,586	+		MPMX19_05987	0.73	+0.4
142,586	+		MPMX19_05987	0.73	-2.0
142,586	+		MPMX19_05987	0.73	+0.2
142,587	-		MPMX19_05987	0.73	+0.5
142,587	-		MPMX19_05987	0.73	-0.6
142,587	-		MPMX19_05987	0.73	+1.4
142,587	-		MPMX19_05987	0.73	+0.3
142,587	-		MPMX19_05987	0.73	-1.5
142,587	-		MPMX19_05987	0.73	-0.1
142,587	-		MPMX19_05987	0.73	+2.1
142,587	-		MPMX19_05987	0.73	+2.5
142,587	-		MPMX19_05987	0.73	+0.7
142,679	+				-1.4
142,679	+				-1.1
142,680	-				-1.3
142,680	-				-0.3
142,680	-				+1.3
142,746	+				+0.9
142,747	-				-1.0
142,758	+				-1.3
142,758	+				+0.3
142,758	+				+0.2
142,758	+				+0.0
142,759	-				-0.3
142,759	-				+0.7
142,775	+				-1.6
142,813	-				-0.1
142,849	+				+0.2
142,851	+				-0.8
142,852	-				-0.6
142,970	+				+1.0
142,971	-				-1.4
142,971	-				-0.3
143,371	+		MPMX19_05988	0.21	+0.4
143,371	+		MPMX19_05988	0.21	-0.3
143,371	+		MPMX19_05988	0.21	-0.3
143,371	+		MPMX19_05988	0.21	-0.4
143,371	+		MPMX19_05988	0.21	-2.2
143,371	+		MPMX19_05988	0.21	+1.2
143,371	+		MPMX19_05988	0.21	-2.1
143,371	+		MPMX19_05988	0.21	-0.8
143,371	+		MPMX19_05988	0.21	-0.7
143,371	+		MPMX19_05988	0.21	-1.4
143,371	+		MPMX19_05988	0.21	+0.5
143,372	-		MPMX19_05988	0.21	-1.1
143,372	-		MPMX19_05988	0.21	-1.3
143,396	-		MPMX19_05988	0.22	+0.3
143,407	+		MPMX19_05988	0.23	+2.3
143,407	+		MPMX19_05988	0.23	+0.0
143,407	+		MPMX19_05988	0.23	-1.3
143,407	+		MPMX19_05988	0.23	-0.7
143,407	+		MPMX19_05988	0.23	+0.7
143,407	+		MPMX19_05988	0.23	-0.7
143,407	+		MPMX19_05988	0.23	-0.5
143,407	+		MPMX19_05988	0.23	+0.5
143,408	-		MPMX19_05988	0.23	-0.6
143,408	-		MPMX19_05988	0.23	+0.7
143,408	-		MPMX19_05988	0.23	+0.7
143,408	-		MPMX19_05988	0.23	-0.6
143,408	-		MPMX19_05988	0.23	-0.3
143,493	+		MPMX19_05988	0.27	-0.1
143,494	-		MPMX19_05988	0.27	-0.7
143,518	+		MPMX19_05988	0.29	-0.7
143,518	+		MPMX19_05988	0.29	-1.4
143,518	+		MPMX19_05988	0.29	-0.3
143,518	+		MPMX19_05988	0.29	+0.4
143,518	+		MPMX19_05988	0.29	-2.2
143,518	+		MPMX19_05988	0.29	-1.7
143,518	+		MPMX19_05988	0.29	+0.9
143,518	+		MPMX19_05988	0.29	+0.7
143,518	+		MPMX19_05988	0.29	-0.8
143,519	-		MPMX19_05988	0.29	-0.5
143,519	-		MPMX19_05988	0.29	-1.4
143,519	-		MPMX19_05988	0.29	-2.1
143,519	-		MPMX19_05988	0.29	+0.1
143,519	-		MPMX19_05988	0.29	-0.3
143,519	-		MPMX19_05988	0.29	-0.4
143,519	-		MPMX19_05988	0.29	-1.3
143,519	-		MPMX19_05988	0.29	+0.1
143,519	-		MPMX19_05988	0.29	-0.1
143,519	-		MPMX19_05988	0.29	+0.0
143,519	-		MPMX19_05988	0.29	-0.6
143,519	-		MPMX19_05988	0.29	-1.3
143,519	-		MPMX19_05988	0.29	-0.3
143,519	-		MPMX19_05988	0.29	-1.2
143,599	+		MPMX19_05988	0.33	-2.3
143,599	+		MPMX19_05988	0.33	-0.4
143,599	+		MPMX19_05988	0.33	+0.2
143,599	+		MPMX19_05988	0.33	-0.3
143,599	+		MPMX19_05988	0.33	+0.9
143,599	+		MPMX19_05988	0.33	-0.6
143,599	+		MPMX19_05988	0.33	+0.2
143,599	+		MPMX19_05988	0.33	-0.8
143,599	+		MPMX19_05988	0.33	-1.8
143,599	+		MPMX19_05988	0.33	-1.4
143,599	+		MPMX19_05988	0.33	-1.1
143,600	-		MPMX19_05988	0.33	-1.3
143,600	-		MPMX19_05988	0.33	-0.7
143,600	-		MPMX19_05988	0.33	-1.2
143,600	-		MPMX19_05988	0.33	+1.0
143,600	-		MPMX19_05988	0.33	-0.3
143,600	-		MPMX19_05988	0.33	+1.4
143,600	-		MPMX19_05988	0.33	+1.2
143,600	-		MPMX19_05988	0.33	+0.3
143,600	-		MPMX19_05988	0.33	-0.0
143,758	+		MPMX19_05988	0.42	-1.1
143,988	+		MPMX19_05988	0.54	-0.8
144,262	+		MPMX19_05988	0.68	-0.1
144,262	+		MPMX19_05988	0.68	-0.6
144,262	+		MPMX19_05988	0.68	-1.3
144,262	+		MPMX19_05988	0.68	+0.7
144,262	+		MPMX19_05988	0.68	-1.0
144,262	+		MPMX19_05988	0.68	-1.9
144,262	+		MPMX19_05988	0.68	+0.3
144,262	+		MPMX19_05988	0.68	+0.7
144,262	+		MPMX19_05988	0.68	-0.1
144,262	+		MPMX19_05988	0.68	-0.4
144,262	+		MPMX19_05988	0.68	-2.3
144,263	-		MPMX19_05988	0.68	-1.7
144,263	-		MPMX19_05988	0.68	-0.0
144,263	-		MPMX19_05988	0.68	-0.1
144,263	-		MPMX19_05988	0.68	-2.3
144,263	-		MPMX19_05988	0.68	+0.9
144,263	-		MPMX19_05988	0.68	+0.0
144,263	-		MPMX19_05988	0.68	-0.4
144,263	-		MPMX19_05988	0.68	+1.1
144,263	-		MPMX19_05988	0.68	-1.3
144,263	-		MPMX19_05988	0.68	+1.7
144,263	-		MPMX19_05988	0.68	-2.7
144,397	+		MPMX19_05988	0.76	-1.6
144,397	+		MPMX19_05988	0.76	-0.3
144,397	+		MPMX19_05988	0.76	-1.7
144,397	+		MPMX19_05988	0.76	+2.0
144,397	+		MPMX19_05988	0.76	-0.8
144,397	+		MPMX19_05988	0.76	+0.2
144,397	+		MPMX19_05988	0.76	-0.1
144,398	-		MPMX19_05988	0.76	-1.2
144,398	-		MPMX19_05988	0.76	-0.7
144,398	-		MPMX19_05988	0.76	-0.9
144,398	-		MPMX19_05988	0.76	-0.1
144,398	-		MPMX19_05988	0.76	+0.6
144,398	-		MPMX19_05988	0.76	-0.3
144,398	-		MPMX19_05988	0.76	-3.7
144,398	-		MPMX19_05988	0.76	+0.2
144,398	-		MPMX19_05988	0.76	-1.1
144,493	+		MPMX19_05988	0.81	-0.6
144,493	+		MPMX19_05988	0.81	-0.8
144,493	+		MPMX19_05988	0.81	-2.1
144,493	+		MPMX19_05988	0.81	-0.4
144,493	+		MPMX19_05988	0.81	+0.7
144,493	+		MPMX19_05988	0.81	-1.4
144,494	-		MPMX19_05988	0.81	-2.4
144,494	-		MPMX19_05988	0.81	-0.4
144,494	-		MPMX19_05988	0.81	+0.9
144,494	-		MPMX19_05988	0.81	+0.2
144,494	-		MPMX19_05988	0.81	-0.3
144,494	-		MPMX19_05988	0.81	-0.6
144,494	-		MPMX19_05988	0.81	+1.6
144,553	+		MPMX19_05988	0.84	-0.3
144,553	+		MPMX19_05988	0.84	+1.6
144,554	-		MPMX19_05988	0.84	-2.9
144,554	-		MPMX19_05988	0.84	+0.4
144,554	-		MPMX19_05988	0.84	+0.2
144,622	+		MPMX19_05988	0.88	-0.6
144,622	+		MPMX19_05988	0.88	-1.6
144,622	+		MPMX19_05988	0.88	-1.7
144,622	+		MPMX19_05988	0.88	-0.4
144,622	+		MPMX19_05988	0.88	+0.7
144,622	+		MPMX19_05988	0.88	-1.1
144,622	+		MPMX19_05988	0.88	-0.4
144,622	+		MPMX19_05988	0.88	-0.8
144,622	+		MPMX19_05988	0.88	-1.5
144,623	-		MPMX19_05988	0.88	-1.3
144,623	-		MPMX19_05988	0.88	+0.4
144,623	-		MPMX19_05988	0.88	-0.5
144,623	-		MPMX19_05988	0.88	-0.3
144,623	-		MPMX19_05988	0.88	-0.5
144,623	-		MPMX19_05988	0.88	-0.1
144,623	-		MPMX19_05988	0.88	+0.7
144,623	-		MPMX19_05988	0.88	+0.5
144,623	-		MPMX19_05988	0.88	+0.0
144,733	+				+0.1
144,733	+				+0.4
144,733	+				+0.2
144,733	+				-0.7
144,733	+				-0.7
144,734	-				-0.3
144,734	-				-0.9
144,734	-				+0.1
144,734	-				-0.8
144,734	-				-2.2
144,734	-				-0.3
144,809	+				+0.4
144,809	+				+0.2
144,809	+				-1.0
144,810	-				+0.5
145,104	+		MPMX19_05989	0.27	-0.7
145,104	+		MPMX19_05989	0.27	-0.6
145,105	-		MPMX19_05989	0.27	+0.0
145,105	-		MPMX19_05989	0.27	-0.8
145,561	+		MPMX19_05989	0.77	-0.7
145,561	+		MPMX19_05989	0.77	-0.1
145,561	+		MPMX19_05989	0.77	-0.6
145,561	+		MPMX19_05989	0.77	-0.1
145,562	-		MPMX19_05989	0.77	+0.6
145,562	-		MPMX19_05989	0.77	-0.4
145,562	-		MPMX19_05989	0.77	+0.2
145,562	-		MPMX19_05989	0.77	-0.1
145,833	+				-1.6
145,834	-				-0.0
145,834	-				-1.1