Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02660

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,779,179	-				-1.7
2,779,179	-				-1.0
2,779,224	+				-0.5
2,779,224	+				+0.2
2,779,224	+				+0.1
2,779,224	+				-1.0
2,779,224	+				+0.2
2,779,224	+				-1.1
2,779,224	+				-0.3
2,779,224	+				-2.7
2,779,224	+				-0.4
2,779,224	+				-1.1
2,779,224	+				+0.9
2,779,224	+				+0.9
2,779,224	+				-0.4
2,779,224	+				-0.5
2,779,224	+				-0.1
2,779,225	-				-1.0
2,779,225	-				+0.0
2,779,225	-				+0.9
2,779,225	-				-0.6
2,779,225	-				-0.1
2,779,225	-				+0.7
2,779,225	-				-0.1
2,779,225	-				-1.0
2,779,225	-				-2.0
2,779,225	-				-0.4
2,779,225	-				-0.5
2,779,225	-				-0.7
2,779,225	-				-0.5
2,779,225	-				-0.0
2,779,226	+				+0.7
2,779,226	+				-0.4
2,779,226	+				+1.6
2,779,226	+				-1.1
2,779,226	+				+0.9
2,779,226	+				+0.3
2,779,227	-				+0.1
2,779,227	-				-0.5
2,779,227	-				+0.7
2,779,283	+				-1.0
2,779,283	+				-1.5
2,779,283	+				+0.7
2,779,283	+				+0.3
2,779,283	+				+0.3
2,779,283	+				-0.1
2,779,284	-				-1.3
2,779,454	+		MPMX19_02659	0.23	-1.2
2,779,454	+		MPMX19_02659	0.23	-0.1
2,779,454	+		MPMX19_02659	0.23	+0.5
2,779,454	+		MPMX19_02659	0.23	-0.1
2,779,454	+		MPMX19_02659	0.23	-2.0
2,779,454	+		MPMX19_02659	0.23	+0.9
2,779,454	+		MPMX19_02659	0.23	-1.1
2,779,454	+		MPMX19_02659	0.23	-0.7
2,779,454	+		MPMX19_02659	0.23	-0.7
2,779,454	+		MPMX19_02659	0.23	+0.1
2,779,454	+		MPMX19_02659	0.23	-0.2
2,779,455	-		MPMX19_02659	0.23	-0.7
2,779,455	-		MPMX19_02659	0.23	-0.1
2,779,455	-		MPMX19_02659	0.23	+0.5
2,779,679	+		MPMX19_02659	0.51	-0.7
2,779,871	+		MPMX19_02659	0.75	-0.7
2,779,871	+		MPMX19_02659	0.75	+0.5
2,779,872	-		MPMX19_02659	0.75	+0.2
2,779,872	-		MPMX19_02659	0.75	-1.3
2,779,880	+		MPMX19_02659	0.76	-2.3
2,779,880	+		MPMX19_02659	0.76	-0.7
2,779,880	+		MPMX19_02659	0.76	+0.3
2,779,880	+		MPMX19_02659	0.76	-1.6
2,779,881	-		MPMX19_02659	0.77	-1.1
2,779,881	-		MPMX19_02659	0.77	-0.6
2,779,881	-		MPMX19_02659	0.77	+0.3
2,779,997	+				+0.3
2,780,060	+				-0.8
2,780,060	+				-1.8
2,780,060	+				+0.3
2,780,060	+				+0.9
2,780,060	+				-0.4
2,780,060	+				-0.7
2,780,060	+				-0.6
2,780,061	-				+1.6
2,780,061	-				-0.1
2,780,061	-				-0.7
2,780,061	-				-0.3
2,780,061	-				+0.7
2,780,061	-				+0.9
2,780,061	-				-1.0
2,780,061	-				+0.3
2,780,061	-				-1.5
2,780,061	-				-1.5
2,780,061	-				-1.8
2,780,061	-				-0.9
2,780,067	-				+0.4
2,780,067	-				+1.5
2,780,067	-				-0.2
2,780,067	-				+0.7
2,780,153	+				-1.3
2,780,154	-				-0.0
2,780,294	+		MPMX19_02660	0.12	-0.7
2,780,294	+		MPMX19_02660	0.12	-1.0
2,780,294	+		MPMX19_02660	0.12	-1.7
2,780,294	+		MPMX19_02660	0.12	+0.4
2,780,294	+		MPMX19_02660	0.12	-0.5
2,780,294	+		MPMX19_02660	0.12	-1.1
2,780,294	+		MPMX19_02660	0.12	+0.2
2,780,294	+		MPMX19_02660	0.12	-0.7
2,780,294	+		MPMX19_02660	0.12	-1.1
2,780,294	+		MPMX19_02660	0.12	-1.1
2,780,295	-		MPMX19_02660	0.12	-1.5
2,780,295	-		MPMX19_02660	0.12	-0.6
2,780,295	-		MPMX19_02660	0.12	-0.1
2,780,295	-		MPMX19_02660	0.12	-1.1
2,780,295	-		MPMX19_02660	0.12	+0.2
2,780,295	-		MPMX19_02660	0.12	+0.3
2,781,354	+				-1.6
2,781,354	+				-0.2
2,781,354	+				-1.7
2,781,354	+				-0.7
2,781,354	+				-0.1
2,781,354	+				+0.7
2,781,354	+				-0.5
2,781,355	-				-1.1
2,781,355	-				-0.6
2,781,355	-				-1.2
2,781,355	-				-1.0
2,781,492	+				-1.7
2,781,492	+				+1.9
2,781,492	+				-0.9
2,781,492	+				+0.1
2,781,492	+				-0.1
2,781,492	+				-1.0
2,781,492	+				-1.0
2,781,492	+				+0.3
2,781,492	+				-1.0
2,781,492	+				+0.4
2,781,492	+				+0.1
2,781,493	-				-0.3
2,781,493	-				-1.1
2,781,493	-				-1.2
2,781,493	-				-0.7
2,781,493	-				-0.4
2,781,493	-				-0.5
2,781,493	-				-1.1
2,781,493	-				-1.3
2,781,555	+				-2.3
2,781,555	+				+0.3
2,781,555	+				-3.4
2,781,555	+				-0.5
2,781,555	+				-0.1
2,781,555	+				-2.8
2,781,555	+				+1.3
2,781,555	+				+1.9
2,781,555	+				-1.0
2,781,555	+				+1.4
2,781,555	+				-0.7
2,781,555	+				+0.6
2,781,555	+				-1.9
2,781,555	+				-0.5
2,781,556	-				-1.1
2,781,556	-				+0.1
2,781,556	-				+0.1
2,781,556	-				-0.1
2,781,556	-				-0.1
2,781,556	-				+0.1
2,781,556	-				-2.3
2,781,556	-				-2.1
2,781,556	-				+0.6
2,781,556	-				+0.4
2,781,556	-				-0.5
2,781,585	+				-0.4
2,781,585	+				+1.4
2,781,585	+				-1.7
2,781,585	+				-1.1
2,781,585	+				-1.3
2,781,585	+				+0.5
2,781,585	+				+0.1
2,781,585	+				+1.9
2,781,585	+				-0.8
2,781,585	+				+0.9
2,781,585	+				-0.2
2,781,585	+				-1.2
2,781,585	+				-2.0
2,781,586	-				-1.3
2,781,586	-				-0.6
2,781,586	-				-0.6
2,781,586	-				-1.5
2,781,586	-				-0.6
2,781,586	-				+0.3
2,781,586	-				-0.1
2,781,586	-				-1.1
2,781,586	-				-0.7
2,781,586	-				+1.3
2,781,586	-				+0.4
2,781,586	-				+0.1
2,781,586	-				-1.5
2,781,834	+		MPMX19_02661	0.32	-0.1
2,781,834	+		MPMX19_02661	0.32	+0.2
2,781,834	+		MPMX19_02661	0.32	+1.5
2,781,834	+		MPMX19_02661	0.32	+0.4
2,781,834	+		MPMX19_02661	0.32	+0.3
2,781,834	+		MPMX19_02661	0.32	+0.6
2,781,834	+		MPMX19_02661	0.32	+1.3
2,781,834	+		MPMX19_02661	0.32	-1.5
2,781,834	+		MPMX19_02661	0.32	-1.1
2,781,834	+		MPMX19_02661	0.32	-2.1
2,781,834	+		MPMX19_02661	0.32	-1.0
2,781,834	+		MPMX19_02661	0.32	+0.9
2,781,834	+		MPMX19_02661	0.32	-1.0
2,781,834	+		MPMX19_02661	0.32	-1.3
2,781,834	+		MPMX19_02661	0.32	-2.1
2,781,834	+		MPMX19_02661	0.32	-1.7
2,781,834	+		MPMX19_02661	0.32	-2.1
2,781,834	+		MPMX19_02661	0.32	-0.6
2,781,834	+		MPMX19_02661	0.32	-0.8
2,781,834	+		MPMX19_02661	0.32	+0.3
2,781,834	+		MPMX19_02661	0.32	-0.2
2,781,834	+		MPMX19_02661	0.32	+0.8
2,781,834	+		MPMX19_02661	0.32	-0.5
2,781,834	+		MPMX19_02661	0.32	-0.6
2,781,834	+		MPMX19_02661	0.32	-0.3
2,781,834	+		MPMX19_02661	0.32	+1.0
2,781,835	-		MPMX19_02661	0.32	-1.0
2,781,835	-		MPMX19_02661	0.32	+0.5
2,781,835	-		MPMX19_02661	0.32	+0.5
2,781,835	-		MPMX19_02661	0.32	+0.1
2,781,835	-		MPMX19_02661	0.32	-0.1
2,781,835	-		MPMX19_02661	0.32	-1.0
2,781,835	-		MPMX19_02661	0.32	+1.0
2,781,835	-		MPMX19_02661	0.32	-0.1
2,781,835	-		MPMX19_02661	0.32	+0.6
2,781,835	-		MPMX19_02661	0.32	+0.5
2,781,835	-		MPMX19_02661	0.32	-2.0
2,781,835	-		MPMX19_02661	0.32	-1.1
2,781,835	-		MPMX19_02661	0.32	+0.9
2,781,835	-		MPMX19_02661	0.32	-1.7
2,781,835	-		MPMX19_02661	0.32	-0.6
2,781,835	-		MPMX19_02661	0.32	+1.0
2,781,835	-		MPMX19_02661	0.32	-1.4
2,781,835	-		MPMX19_02661	0.32	-0.3
2,781,835	-		MPMX19_02661	0.32	+1.3
2,781,835	-		MPMX19_02661	0.32	+1.0
2,781,835	-		MPMX19_02661	0.32	+0.1
2,781,835	-		MPMX19_02661	0.32	-1.3
2,781,858	+		MPMX19_02661	0.34	-0.1
2,781,858	+		MPMX19_02661	0.34	-0.7
2,781,858	+		MPMX19_02661	0.34	-0.1
2,781,858	+		MPMX19_02661	0.34	+0.3
2,781,858	+		MPMX19_02661	0.34	-1.3
2,781,858	+		MPMX19_02661	0.34	-0.1
2,781,858	+		MPMX19_02661	0.34	-2.3
2,781,858	+		MPMX19_02661	0.34	+0.3
2,781,858	+		MPMX19_02661	0.34	-0.7
2,781,858	+		MPMX19_02661	0.34	-2.1
2,781,858	+		MPMX19_02661	0.34	+0.2
2,781,858	+		MPMX19_02661	0.34	+1.3
2,781,858	+		MPMX19_02661	0.34	+1.2
2,781,858	+		MPMX19_02661	0.34	-1.5
2,781,858	+		MPMX19_02661	0.34	-0.9
2,781,858	+		MPMX19_02661	0.34	-0.4
2,781,858	+		MPMX19_02661	0.34	+0.3
2,781,858	+		MPMX19_02661	0.34	+0.9
2,781,858	+		MPMX19_02661	0.34	-0.1
2,781,858	+		MPMX19_02661	0.34	+0.1
2,781,858	+		MPMX19_02661	0.34	-0.2
2,781,858	+		MPMX19_02661	0.34	-0.7
2,781,858	+		MPMX19_02661	0.34	+1.7
2,781,858	+		MPMX19_02661	0.34	-0.7
2,781,858	+		MPMX19_02661	0.34	-1.1
2,781,858	+		MPMX19_02661	0.34	-2.0
2,781,858	+		MPMX19_02661	0.34	-0.7
2,781,858	+		MPMX19_02661	0.34	-1.0
2,781,858	+		MPMX19_02661	0.34	-0.6
2,781,858	+		MPMX19_02661	0.34	-0.1
2,781,858	+		MPMX19_02661	0.34	-0.1
2,781,858	+		MPMX19_02661	0.34	+0.7
2,781,859	-		MPMX19_02661	0.34	-0.0
2,781,859	-		MPMX19_02661	0.34	+1.1
2,781,859	-		MPMX19_02661	0.34	+0.7
2,781,859	-		MPMX19_02661	0.34	-0.8
2,781,859	-		MPMX19_02661	0.34	-0.7
2,781,859	-		MPMX19_02661	0.34	+0.5
2,781,859	-		MPMX19_02661	0.34	+1.5
2,781,859	-		MPMX19_02661	0.34	-1.2
2,781,859	-		MPMX19_02661	0.34	-0.7
2,781,859	-		MPMX19_02661	0.34	+0.6
2,781,859	-		MPMX19_02661	0.34	-1.3
2,781,859	-		MPMX19_02661	0.34	-0.5
2,781,859	-		MPMX19_02661	0.34	-0.6
2,781,859	-		MPMX19_02661	0.34	-1.5
2,781,859	-		MPMX19_02661	0.34	+0.3
2,781,859	-		MPMX19_02661	0.34	+0.3
2,781,859	-		MPMX19_02661	0.34	+1.3
2,781,859	-		MPMX19_02661	0.34	+0.3
2,781,859	-		MPMX19_02661	0.34	-0.1
2,781,859	-		MPMX19_02661	0.34	-1.4
2,781,859	-		MPMX19_02661	0.34	-1.3
2,781,859	-		MPMX19_02661	0.34	+1.0
2,781,859	-		MPMX19_02661	0.34	-1.8
2,781,859	-		MPMX19_02661	0.34	-1.3
2,781,859	-		MPMX19_02661	0.34	+0.0
2,781,859	-		MPMX19_02661	0.34	-0.4
2,781,859	-		MPMX19_02661	0.34	-1.6
2,781,859	-		MPMX19_02661	0.34	-1.5
2,781,859	-		MPMX19_02661	0.34	-0.7
2,781,859	-		MPMX19_02661	0.34	-0.3
2,781,859	-		MPMX19_02661	0.34	-1.5
2,781,859	-		MPMX19_02661	0.34	-0.1
2,781,924	+		MPMX19_02661	0.41	+1.1
2,781,924	+		MPMX19_02661	0.41	-0.7
2,781,924	+		MPMX19_02661	0.41	-1.6
2,781,924	+		MPMX19_02661	0.41	-1.2
2,781,924	+		MPMX19_02661	0.41	-0.1
2,781,924	+		MPMX19_02661	0.41	+0.9
2,781,924	+		MPMX19_02661	0.41	-0.0
2,781,924	+		MPMX19_02661	0.41	-0.6
2,781,924	+		MPMX19_02661	0.41	-0.5
2,781,924	+		MPMX19_02661	0.41	-1.1
2,781,924	+		MPMX19_02661	0.41	+2.0
2,781,924	+		MPMX19_02661	0.41	-0.2
2,781,924	+		MPMX19_02661	0.41	+0.8
2,781,924	+		MPMX19_02661	0.41	+0.7
2,781,924	+		MPMX19_02661	0.41	+0.3
2,781,924	+		MPMX19_02661	0.41	-0.7
2,781,924	+		MPMX19_02661	0.41	+0.3
2,781,924	+		MPMX19_02661	0.41	+1.1
2,781,924	+		MPMX19_02661	0.41	+0.3
2,781,924	+		MPMX19_02661	0.41	+0.6
2,781,924	+		MPMX19_02661	0.41	+0.3
2,781,925	-		MPMX19_02661	0.41	+0.4
2,781,925	-		MPMX19_02661	0.41	+0.9
2,781,925	-		MPMX19_02661	0.41	-1.8
2,781,925	-		MPMX19_02661	0.41	-1.2
2,781,925	-		MPMX19_02661	0.41	-2.7
2,781,925	-		MPMX19_02661	0.41	-0.1
2,781,925	-		MPMX19_02661	0.41	-0.7
2,781,925	-		MPMX19_02661	0.41	-0.1
2,781,925	-		MPMX19_02661	0.41	-1.1
2,781,925	-		MPMX19_02661	0.41	+1.0
2,781,925	-		MPMX19_02661	0.41	-0.5
2,781,925	-		MPMX19_02661	0.41	+0.1
2,781,925	-		MPMX19_02661	0.41	-1.0
2,781,925	-		MPMX19_02661	0.41	+0.8
2,781,925	-		MPMX19_02661	0.41	-1.3
2,781,925	-		MPMX19_02661	0.41	-0.8
2,781,925	-		MPMX19_02661	0.41	+0.9
2,781,925	-		MPMX19_02661	0.41	+1.4
2,782,107	+		MPMX19_02661	0.60	-0.1
2,782,107	+		MPMX19_02661	0.60	-1.7
2,782,107	+		MPMX19_02661	0.60	+0.3
2,782,107	+		MPMX19_02661	0.60	-2.6
2,782,108	-		MPMX19_02661	0.60	-0.5
2,782,108	-		MPMX19_02661	0.60	-0.4
2,782,108	-		MPMX19_02661	0.60	+0.2
2,782,108	-		MPMX19_02661	0.60	-0.1
2,782,108	-		MPMX19_02661	0.60	-1.0
2,782,108	-		MPMX19_02661	0.60	-1.0
2,782,108	-		MPMX19_02661	0.60	-1.7
2,782,108	-		MPMX19_02661	0.60	-0.4
2,782,108	-		MPMX19_02661	0.60	-0.9
2,782,108	-		MPMX19_02661	0.60	+0.8
2,782,245	+		MPMX19_02661	0.74	+0.7
2,782,245	+		MPMX19_02661	0.74	-2.1
2,782,245	+		MPMX19_02661	0.74	-0.1
2,782,245	+		MPMX19_02661	0.74	+0.6
2,782,245	+		MPMX19_02661	0.74	-2.0
2,782,245	+		MPMX19_02661	0.74	+0.5
2,782,245	+		MPMX19_02661	0.74	+1.5
2,782,245	+		MPMX19_02661	0.74	-0.4
2,782,245	+		MPMX19_02661	0.74	-0.3
2,782,246	-		MPMX19_02661	0.74	-1.3
2,782,246	-		MPMX19_02661	0.74	-0.0
2,782,246	-		MPMX19_02661	0.74	+1.5
2,782,246	-		MPMX19_02661	0.74	-0.3