Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02391

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,513,369	+		MPMX19_02389	0.59	-0.4
2,513,369	+		MPMX19_02389	0.59	-1.9
2,513,369	+		MPMX19_02389	0.59	-2.2
2,513,369	+		MPMX19_02389	0.59	-0.3
2,513,370	-		MPMX19_02389	0.59	+0.1
2,513,370	-		MPMX19_02389	0.59	+1.1
2,513,370	-		MPMX19_02389	0.59	-0.2
2,513,370	-		MPMX19_02389	0.59	-0.7
2,513,370	-		MPMX19_02389	0.59	-0.4
2,513,370	-		MPMX19_02389	0.59	-1.8
2,513,396	+		MPMX19_02389	0.62	-0.0
2,513,396	+		MPMX19_02389	0.62	+0.2
2,513,397	-		MPMX19_02389	0.62	-0.4
2,513,397	-		MPMX19_02389	0.62	+0.8
2,513,591	+		MPMX19_02389	0.88	-0.6
2,513,591	+		MPMX19_02389	0.88	-0.8
2,513,591	+		MPMX19_02389	0.88	-0.8
2,513,591	+		MPMX19_02389	0.88	-0.8
2,513,591	+		MPMX19_02389	0.88	-0.2
2,513,591	+		MPMX19_02389	0.88	+0.0
2,513,591	+		MPMX19_02389	0.88	-0.7
2,513,591	+		MPMX19_02389	0.88	+0.8
2,513,591	+		MPMX19_02389	0.88	-1.7
2,513,591	+		MPMX19_02389	0.88	-1.2
2,513,591	+		MPMX19_02389	0.88	-0.1
2,513,591	+		MPMX19_02389	0.88	-0.9
2,513,592	-		MPMX19_02389	0.88	-0.8
2,513,592	-		MPMX19_02389	0.88	-1.2
2,513,592	-		MPMX19_02389	0.88	-0.5
2,513,592	-		MPMX19_02389	0.88	-0.8
2,513,592	-		MPMX19_02389	0.88	+0.4
2,513,592	-		MPMX19_02389	0.88	+1.1
2,513,592	-		MPMX19_02389	0.88	-1.3
2,513,592	-		MPMX19_02389	0.88	+0.8
2,513,592	-		MPMX19_02389	0.88	-0.3
2,513,592	-		MPMX19_02389	0.88	+0.4
2,513,592	-		MPMX19_02389	0.88	-0.1
2,513,592	-		MPMX19_02389	0.88	-1.0
2,513,592	-		MPMX19_02389	0.88	-2.4
2,513,611	+				+1.7
2,513,611	+				+0.4
2,513,611	+				+0.0
2,513,611	+				-0.9
2,513,611	+				+0.4
2,513,611	+				-0.2
2,513,611	+				-0.3
2,513,611	+				+0.9
2,513,611	+				-0.3
2,513,611	+				+0.5
2,513,612	-				-1.2
2,513,612	-				-1.2
2,513,612	-				-0.9
2,513,612	-				-1.0
2,513,612	-				+0.6
2,513,612	-				-1.0
2,513,612	-				+1.5
2,513,681	+				+0.5
2,513,681	+				+0.5
2,513,682	-				-0.6
2,513,682	-				+0.3
2,513,682	-				+0.6
2,513,710	+				-1.6
2,513,710	+				-0.8
2,513,711	-				+0.6
2,514,027	+				+0.8
2,514,027	+				+1.1
2,514,027	+				-0.7
2,514,027	+				-1.0
2,514,028	-				+0.4
2,514,028	-				+0.2
2,514,028	-				-0.8
2,514,028	-				-0.8
2,514,045	+				-1.3
2,514,045	+				+1.4
2,514,045	+				+0.1
2,514,045	+				+0.5
2,514,045	+				+0.2
2,514,045	+				+0.2
2,514,045	+				+0.3
2,514,045	+				-1.2
2,514,045	+				-1.4
2,514,046	-				+0.9
2,514,046	-				+0.0
2,514,046	-				+0.2
2,514,046	-				+0.2
2,514,046	-				-0.8
2,514,046	-				-0.8
2,514,053	+				+0.2
2,514,053	+				+1.2
2,514,053	+				-0.5
2,514,240	-				-1.2
2,514,259	+				+1.8
2,514,259	+				+1.6
2,514,259	+				-0.6
2,514,260	-				+0.2
2,514,260	-				+0.1
2,514,260	-				+0.7
2,514,260	-				+0.2
2,514,260	-				+0.5
2,514,260	-				+0.4
2,514,427	+		MPMX19_02391	0.27	-0.3
2,514,427	+		MPMX19_02391	0.27	-1.0
2,514,427	+		MPMX19_02391	0.27	-0.5
2,514,428	-		MPMX19_02391	0.27	-0.1
2,514,428	-		MPMX19_02391	0.27	-1.1
2,514,428	-		MPMX19_02391	0.27	-0.2
2,514,428	-		MPMX19_02391	0.27	-0.0
2,514,526	+		MPMX19_02391	0.45	+1.8
2,514,526	+		MPMX19_02391	0.45	-0.6
2,514,526	+		MPMX19_02391	0.45	-2.3
2,514,526	+		MPMX19_02391	0.45	-1.1
2,514,527	-		MPMX19_02391	0.45	-0.4
2,514,527	-		MPMX19_02391	0.45	-1.2
2,514,532	+		MPMX19_02391	0.46	-0.3
2,514,532	+		MPMX19_02391	0.46	-0.8
2,514,532	+		MPMX19_02391	0.46	-2.5
2,514,532	+		MPMX19_02391	0.46	+0.2
2,514,532	+		MPMX19_02391	0.46	-1.9
2,514,532	+		MPMX19_02391	0.46	-1.2
2,514,532	+		MPMX19_02391	0.46	-1.3
2,514,532	+		MPMX19_02391	0.46	+0.5
2,514,532	+		MPMX19_02391	0.46	-0.8
2,514,532	+		MPMX19_02391	0.46	-0.6
2,514,532	+		MPMX19_02391	0.46	-0.6
2,514,532	+		MPMX19_02391	0.46	-0.7
2,514,532	+		MPMX19_02391	0.46	-0.2
2,514,532	+		MPMX19_02391	0.46	+1.0
2,514,532	+		MPMX19_02391	0.46	-0.0
2,514,532	+		MPMX19_02391	0.46	-0.5
2,514,532	+		MPMX19_02391	0.46	-0.8
2,514,533	-		MPMX19_02391	0.46	-1.3
2,514,533	-		MPMX19_02391	0.46	-0.8
2,514,533	-		MPMX19_02391	0.46	-0.5
2,514,533	-		MPMX19_02391	0.46	-0.2
2,514,533	-		MPMX19_02391	0.46	-0.5
2,514,533	-		MPMX19_02391	0.46	+0.6
2,514,533	-		MPMX19_02391	0.46	+0.2
2,514,533	-		MPMX19_02391	0.46	-0.2
2,514,533	-		MPMX19_02391	0.46	-1.3
2,514,533	-		MPMX19_02391	0.46	-1.0
2,514,533	-		MPMX19_02391	0.46	-0.6
2,514,533	-		MPMX19_02391	0.46	+0.6
2,514,533	-		MPMX19_02391	0.46	+0.1
2,514,533	-		MPMX19_02391	0.46	+1.0
2,514,533	-		MPMX19_02391	0.46	-0.2
2,514,533	-		MPMX19_02391	0.46	-1.3
2,514,533	-		MPMX19_02391	0.46	-1.5
2,514,533	-		MPMX19_02391	0.46	-1.6
2,514,533	-		MPMX19_02391	0.46	-1.0
2,514,840	+				-0.7
2,514,840	+				-0.2
2,514,841	-				+0.2
2,514,841	-				-1.0
2,514,841	-				-0.9
2,514,985	+				-0.4
2,514,985	+				-1.0
2,514,985	+				-0.5
2,514,985	+				-2.2
2,514,986	-				-0.3
2,514,986	-				-1.3
2,514,986	-				-1.6
2,514,986	-				-1.8
2,514,986	-				+1.8
2,514,986	-				-1.3
2,514,986	-				+0.0
2,515,060	+		MPMX19_02392	0.12	-0.0
2,515,060	+		MPMX19_02392	0.12	-0.0
2,515,060	+		MPMX19_02392	0.12	-1.2
2,515,060	+		MPMX19_02392	0.12	-0.6
2,515,060	+		MPMX19_02392	0.12	-1.1
2,515,060	+		MPMX19_02392	0.12	-0.5
2,515,060	+		MPMX19_02392	0.12	-0.2
2,515,060	+		MPMX19_02392	0.12	-0.9
2,515,060	+		MPMX19_02392	0.12	+0.2
2,515,060	+		MPMX19_02392	0.12	-1.5
2,515,060	+		MPMX19_02392	0.12	-1.2
2,515,060	+		MPMX19_02392	0.12	-1.3
2,515,060	+		MPMX19_02392	0.12	+0.4
2,515,061	-		MPMX19_02392	0.12	+0.1
2,515,061	-		MPMX19_02392	0.12	-0.8
2,515,061	-		MPMX19_02392	0.12	+0.6
2,515,061	-		MPMX19_02392	0.12	-3.3
2,515,061	-		MPMX19_02392	0.12	-0.2
2,515,061	-		MPMX19_02392	0.12	-2.3
2,515,061	-		MPMX19_02392	0.12	-0.5
2,515,061	-		MPMX19_02392	0.12	+0.2
2,515,061	-		MPMX19_02392	0.12	-1.9
2,515,061	-		MPMX19_02392	0.12	-0.2
2,515,138	+		MPMX19_02392	0.19	+0.4
2,515,138	+		MPMX19_02392	0.19	-1.2
2,515,139	-		MPMX19_02392	0.19	-0.7
2,515,139	-		MPMX19_02392	0.19	-1.2
2,515,144	+		MPMX19_02392	0.19	+1.5
2,515,144	+		MPMX19_02392	0.19	-0.2
2,515,144	+		MPMX19_02392	0.19	+0.0
2,515,144	+		MPMX19_02392	0.19	-0.0
2,515,144	+		MPMX19_02392	0.19	+0.1
2,515,144	+		MPMX19_02392	0.19	+0.3
2,515,144	+		MPMX19_02392	0.19	+1.2
2,515,144	+		MPMX19_02392	0.19	-2.2
2,515,144	+		MPMX19_02392	0.19	-0.1
2,515,144	+		MPMX19_02392	0.19	-0.5
2,515,144	+		MPMX19_02392	0.19	-0.2
2,515,144	+		MPMX19_02392	0.19	-0.8
2,515,144	+		MPMX19_02392	0.19	-0.3
2,515,144	+		MPMX19_02392	0.19	-0.5
2,515,144	+		MPMX19_02392	0.19	+0.6
2,515,144	+		MPMX19_02392	0.19	+1.8
2,515,144	+		MPMX19_02392	0.19	-0.0
2,515,144	+		MPMX19_02392	0.19	+0.2
2,515,144	+		MPMX19_02392	0.19	-0.2
2,515,144	+		MPMX19_02392	0.19	+1.2
2,515,144	+		MPMX19_02392	0.19	+1.4
2,515,144	+		MPMX19_02392	0.19	-1.3
2,515,144	+		MPMX19_02392	0.19	-0.8
2,515,144	+		MPMX19_02392	0.19	+0.1
2,515,144	+		MPMX19_02392	0.19	-0.0
2,515,144	+		MPMX19_02392	0.19	-1.8
2,515,144	+		MPMX19_02392	0.19	-0.6
2,515,144	+		MPMX19_02392	0.19	-0.3
2,515,144	+		MPMX19_02392	0.19	-1.5
2,515,144	+		MPMX19_02392	0.19	-1.1
2,515,144	+		MPMX19_02392	0.19	+1.1
2,515,144	+		MPMX19_02392	0.19	-0.8
2,515,144	+		MPMX19_02392	0.19	-0.8
2,515,144	+		MPMX19_02392	0.19	-2.8
2,515,144	+		MPMX19_02392	0.19	-0.7
2,515,144	+		MPMX19_02392	0.19	-1.5
2,515,144	+		MPMX19_02392	0.19	-1.1
2,515,144	+		MPMX19_02392	0.19	+0.4
2,515,144	+		MPMX19_02392	0.19	-0.4
2,515,144	+		MPMX19_02392	0.19	-1.4
2,515,145	-		MPMX19_02392	0.19	+0.4
2,515,145	-		MPMX19_02392	0.19	-2.1
2,515,145	-		MPMX19_02392	0.19	-1.0
2,515,145	-		MPMX19_02392	0.19	+1.2
2,515,145	-		MPMX19_02392	0.19	-1.2
2,515,145	-		MPMX19_02392	0.19	+0.6
2,515,145	-		MPMX19_02392	0.19	-1.8
2,515,145	-		MPMX19_02392	0.19	+0.4
2,515,145	-		MPMX19_02392	0.19	-2.5
2,515,145	-		MPMX19_02392	0.19	-1.9
2,515,145	-		MPMX19_02392	0.19	+1.1
2,515,145	-		MPMX19_02392	0.19	-1.3
2,515,145	-		MPMX19_02392	0.19	-2.3
2,515,145	-		MPMX19_02392	0.19	-0.3
2,515,145	-		MPMX19_02392	0.19	-0.1
2,515,145	-		MPMX19_02392	0.19	-0.5
2,515,145	-		MPMX19_02392	0.19	+0.8
2,515,145	-		MPMX19_02392	0.19	-2.0
2,515,145	-		MPMX19_02392	0.19	+0.4
2,515,145	-		MPMX19_02392	0.19	-1.3
2,515,145	-		MPMX19_02392	0.19	-0.4
2,515,145	-		MPMX19_02392	0.19	-2.6
2,515,145	-		MPMX19_02392	0.19	-1.5
2,515,145	-		MPMX19_02392	0.19	-1.1
2,515,145	-		MPMX19_02392	0.19	-0.9
2,515,145	-		MPMX19_02392	0.19	-0.9
2,515,145	-		MPMX19_02392	0.19	-1.3
2,515,145	-		MPMX19_02392	0.19	-1.4
2,515,145	-		MPMX19_02392	0.19	-0.3
2,515,145	-		MPMX19_02392	0.19	+1.2
2,515,145	-		MPMX19_02392	0.19	-0.3
2,515,145	-		MPMX19_02392	0.19	-1.7
2,515,145	-		MPMX19_02392	0.19	-1.6
2,515,145	-		MPMX19_02392	0.19	-2.2
2,515,145	-		MPMX19_02392	0.19	-0.3
2,515,145	-		MPMX19_02392	0.19	-0.5
2,515,145	-		MPMX19_02392	0.19	-0.2
2,515,145	-		MPMX19_02392	0.19	-2.1
2,515,145	-		MPMX19_02392	0.19	+0.0
2,515,369	+		MPMX19_02392	0.38	-1.3
2,515,370	-		MPMX19_02392	0.38	-1.0
2,515,370	-		MPMX19_02392	0.38	-0.8
2,515,396	+		MPMX19_02392	0.40	-0.2
2,515,396	+		MPMX19_02392	0.40	-0.8
2,515,397	-		MPMX19_02392	0.40	-1.4
2,515,397	-		MPMX19_02392	0.40	+0.2
2,515,397	-		MPMX19_02392	0.40	+0.4
2,515,397	-		MPMX19_02392	0.40	+0.1
2,515,435	+		MPMX19_02392	0.43	-1.7
2,515,435	+		MPMX19_02392	0.43	+0.8
2,515,435	+		MPMX19_02392	0.43	-0.1
2,515,435	+		MPMX19_02392	0.43	-0.2
2,515,435	+		MPMX19_02392	0.43	-2.1
2,515,435	+		MPMX19_02392	0.43	-0.5
2,515,436	-		MPMX19_02392	0.43	+2.1
2,515,436	-		MPMX19_02392	0.43	+0.2
2,515,483	+		MPMX19_02392	0.47	-0.6
2,515,483	+		MPMX19_02392	0.47	-1.3
2,515,483	+		MPMX19_02392	0.47	-0.0
2,515,483	+		MPMX19_02392	0.47	-0.3
2,515,483	+		MPMX19_02392	0.47	-1.5
2,515,483	+		MPMX19_02392	0.47	-0.3
2,515,483	+		MPMX19_02392	0.47	-0.3
2,515,483	+		MPMX19_02392	0.47	-0.1
2,515,484	-		MPMX19_02392	0.47	-0.9
2,515,484	-		MPMX19_02392	0.47	-1.3
2,515,484	-		MPMX19_02392	0.47	-1.8
2,515,484	-		MPMX19_02392	0.47	-0.3
2,515,484	-		MPMX19_02392	0.47	-1.0
2,515,484	-		MPMX19_02392	0.47	-0.4
2,515,484	-		MPMX19_02392	0.47	-1.3
2,515,484	-		MPMX19_02392	0.47	-2.0
2,515,484	-		MPMX19_02392	0.47	-0.7
2,515,484	-		MPMX19_02392	0.47	+0.2
2,515,484	-		MPMX19_02392	0.47	+0.6
2,515,484	-		MPMX19_02392	0.47	-0.2
2,515,484	-		MPMX19_02392	0.47	+0.2
2,515,498	+		MPMX19_02392	0.49	-1.5
2,515,498	+		MPMX19_02392	0.49	-2.0
2,515,498	+		MPMX19_02392	0.49	-0.2
2,515,498	+		MPMX19_02392	0.49	+0.0
2,515,498	+		MPMX19_02392	0.49	-0.5
2,515,498	+		MPMX19_02392	0.49	-0.5
2,515,498	+		MPMX19_02392	0.49	-0.9
2,515,498	+		MPMX19_02392	0.49	-0.5
2,515,498	+		MPMX19_02392	0.49	-0.1
2,515,498	+		MPMX19_02392	0.49	-0.6
2,515,498	+		MPMX19_02392	0.49	+1.7
2,515,498	+		MPMX19_02392	0.49	+0.7
2,515,498	+		MPMX19_02392	0.49	+0.1
2,515,498	+		MPMX19_02392	0.49	+1.8
2,515,498	+		MPMX19_02392	0.49	-2.3
2,515,498	+		MPMX19_02392	0.49	-1.5
2,515,498	+		MPMX19_02392	0.49	-0.0
2,515,499	-		MPMX19_02392	0.49	-1.3
2,515,499	-		MPMX19_02392	0.49	-1.8
2,515,499	-		MPMX19_02392	0.49	+1.1
2,515,499	-		MPMX19_02392	0.49	+0.4
2,515,499	-		MPMX19_02392	0.49	-2.6
2,515,499	-		MPMX19_02392	0.49	-1.0
2,515,499	-		MPMX19_02392	0.49	-1.5
2,515,499	-		MPMX19_02392	0.49	+1.5
2,515,499	-		MPMX19_02392	0.49	-0.3
2,515,499	-		MPMX19_02392	0.49	-0.6
2,515,499	-		MPMX19_02392	0.49	-0.3
2,515,499	-		MPMX19_02392	0.49	+0.2
2,515,499	-		MPMX19_02392	0.49	-0.9
2,515,499	-		MPMX19_02392	0.49	-1.6
2,515,499	-		MPMX19_02392	0.49	+0.0
2,515,499	-		MPMX19_02392	0.49	-1.8
2,515,499	-		MPMX19_02392	0.49	-1.3
2,515,576	+		MPMX19_02392	0.55	-2.5
2,515,576	+		MPMX19_02392	0.55	-1.5
2,515,576	+		MPMX19_02392	0.55	+0.0
2,515,577	-		MPMX19_02392	0.55	+0.2
2,515,577	-		MPMX19_02392	0.55	+0.1
2,515,577	-		MPMX19_02392	0.55	+0.2
2,515,577	-		MPMX19_02392	0.55	-1.6
2,515,577	-		MPMX19_02392	0.55	-0.8
2,515,577	-		MPMX19_02392	0.55	-2.2
2,515,735	+		MPMX19_02392	0.68	-1.2
2,515,735	+		MPMX19_02392	0.68	-0.8
2,515,735	+		MPMX19_02392	0.68	-0.6
2,515,736	-		MPMX19_02392	0.68	+0.1
2,515,736	-		MPMX19_02392	0.68	-0.6
2,515,736	-		MPMX19_02392	0.68	-0.5
2,515,747	+		MPMX19_02392	0.69	+0.2
2,515,747	+		MPMX19_02392	0.69	-0.8
2,515,747	+		MPMX19_02392	0.69	+0.1
2,515,747	+		MPMX19_02392	0.69	-1.5
2,515,748	-		MPMX19_02392	0.69	-0.8
2,515,804	+		MPMX19_02392	0.74	-0.2
2,515,804	+		MPMX19_02392	0.74	-1.0
2,515,804	+		MPMX19_02392	0.74	-1.3
2,515,804	+		MPMX19_02392	0.74	-2.0
2,515,804	+		MPMX19_02392	0.74	-3.3
2,515,805	-		MPMX19_02392	0.74	-1.2
2,515,805	-		MPMX19_02392	0.74	-0.8
2,515,805	-		MPMX19_02392	0.74	+0.7
2,515,805	-		MPMX19_02392	0.74	-0.3
2,515,805	-		MPMX19_02392	0.74	+0.0
2,515,805	-		MPMX19_02392	0.74	+0.0
2,515,805	-		MPMX19_02392	0.74	-1.1
2,515,805	-		MPMX19_02392	0.74	-1.0
2,515,805	-		MPMX19_02392	0.74	+0.5
2,515,805	-		MPMX19_02392	0.74	-0.6
2,515,805	-		MPMX19_02392	0.74	+0.1
2,515,805	-		MPMX19_02392	0.74	-1.2
2,515,805	-		MPMX19_02392	0.74	+0.8
2,515,805	-		MPMX19_02392	0.74	+1.6