Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02374

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,497,343	+				-0.6
2,497,343	+				+0.1
2,497,343	+				-0.7
2,497,343	+				+0.4
2,497,343	+				-1.9
2,497,344	-				-1.3
2,497,344	-				-1.5
2,497,344	-				+0.5
2,497,344	-				-1.0
2,497,344	-				-1.2
2,497,411	-				-0.2
2,497,521	-				+0.8
2,497,521	-				+0.3
2,497,531	+				-0.4
2,497,531	+				-0.9
2,497,531	+				+1.4
2,497,531	+				+1.1
2,497,531	+				-2.0
2,497,532	-				+0.4
2,497,532	-				-2.0
2,497,532	-				-0.9
2,497,532	-				-0.2
2,497,532	-				+0.8
2,497,532	-				+0.0
2,497,532	-				-2.0
2,497,532	-				-1.5
2,497,651	+		MPMX19_02373	0.19	+1.4
2,497,651	+		MPMX19_02373	0.19	-0.6
2,497,651	+		MPMX19_02373	0.19	-0.2
2,497,651	+		MPMX19_02373	0.19	+0.5
2,497,651	+		MPMX19_02373	0.19	-1.2
2,497,651	+		MPMX19_02373	0.19	-0.1
2,497,651	+		MPMX19_02373	0.19	+0.1
2,497,651	+		MPMX19_02373	0.19	+0.8
2,497,651	+		MPMX19_02373	0.19	-1.0
2,497,651	+		MPMX19_02373	0.19	+0.1
2,497,651	+		MPMX19_02373	0.19	+1.1
2,497,652	-		MPMX19_02373	0.19	+1.2
2,497,652	-		MPMX19_02373	0.19	-0.2
2,497,652	-		MPMX19_02373	0.19	+0.4
2,497,652	-		MPMX19_02373	0.19	-0.1
2,497,652	-		MPMX19_02373	0.19	-0.7
2,497,729	+		MPMX19_02373	0.35	+0.0
2,497,729	+		MPMX19_02373	0.35	+1.0
2,497,729	+		MPMX19_02373	0.35	-0.9
2,497,729	+		MPMX19_02373	0.35	-0.3
2,497,729	+		MPMX19_02373	0.35	+0.1
2,497,729	+		MPMX19_02373	0.35	+0.1
2,497,729	+		MPMX19_02373	0.35	-0.2
2,497,730	-		MPMX19_02373	0.35	+0.3
2,497,730	-		MPMX19_02373	0.35	-0.0
2,497,730	-		MPMX19_02373	0.35	-0.4
2,497,730	-		MPMX19_02373	0.35	-1.1
2,497,730	-		MPMX19_02373	0.35	+0.8
2,497,730	-		MPMX19_02373	0.35	-1.0
2,497,730	-		MPMX19_02373	0.35	-1.2
2,497,730	-		MPMX19_02373	0.35	-0.7
2,497,731	+		MPMX19_02373	0.36	-0.2
2,497,731	+		MPMX19_02373	0.36	-1.7
2,497,731	+		MPMX19_02373	0.36	+0.3
2,497,731	+		MPMX19_02373	0.36	-0.0
2,497,731	+		MPMX19_02373	0.36	+0.4
2,497,731	+		MPMX19_02373	0.36	+0.3
2,497,731	+		MPMX19_02373	0.36	-0.1
2,497,731	+		MPMX19_02373	0.36	-1.4
2,497,731	+		MPMX19_02373	0.36	-1.2
2,497,731	+		MPMX19_02373	0.36	-1.2
2,497,731	+		MPMX19_02373	0.36	+0.4
2,497,731	+		MPMX19_02373	0.36	-1.9
2,497,732	-		MPMX19_02373	0.36	-0.7
2,497,732	-		MPMX19_02373	0.36	+1.8
2,497,732	-		MPMX19_02373	0.36	+1.0
2,497,732	-		MPMX19_02373	0.36	-0.3
2,497,732	-		MPMX19_02373	0.36	-0.5
2,497,732	-		MPMX19_02373	0.36	-1.3
2,497,732	-		MPMX19_02373	0.36	+0.7
2,497,732	-		MPMX19_02373	0.36	-0.7
2,497,732	-		MPMX19_02373	0.36	+1.0
2,497,732	-		MPMX19_02373	0.36	-0.7
2,497,732	-		MPMX19_02373	0.36	+0.2
2,497,732	-		MPMX19_02373	0.36	-1.1
2,497,732	-		MPMX19_02373	0.36	-0.6
2,497,732	-		MPMX19_02373	0.36	+0.5
2,497,732	-		MPMX19_02373	0.36	+0.7
2,497,732	-		MPMX19_02373	0.36	-0.0
2,497,732	-		MPMX19_02373	0.36	-1.6
2,497,732	-		MPMX19_02373	0.36	-1.0
2,497,770	+		MPMX19_02373	0.44	+0.4
2,497,770	+		MPMX19_02373	0.44	+0.0
2,497,771	-		MPMX19_02373	0.44	-1.9
2,498,012	+				-1.2
2,498,012	+				-2.0
2,498,012	+				+0.3
2,498,012	+				-0.5
2,498,012	+				-0.6
2,498,013	-				+0.6
2,498,013	-				-0.2
2,498,013	-				-1.2
2,498,013	-				-0.6
2,498,029	+				-0.8
2,498,029	+				-0.2
2,498,029	+				+1.4
2,498,029	+				-0.7
2,498,029	+				-0.2
2,498,029	+				+0.1
2,498,029	+				-0.5
2,498,029	+				-0.2
2,498,029	+				-0.5
2,498,029	+				+1.0
2,498,029	+				+0.5
2,498,029	+				-1.2
2,498,030	-				-0.1
2,498,030	-				+1.0
2,498,030	-				-0.4
2,498,030	-				-0.6
2,498,030	-				-0.5
2,498,129	-				+0.8
2,498,133	-				+0.4
2,498,133	-				-2.2
2,498,133	-				-0.2
2,498,148	+				+1.1
2,498,148	+				-1.3
2,498,148	+				-1.0
2,498,149	-				-1.0
2,498,149	-				+0.0
2,498,149	-				+2.0
2,498,149	-				-2.6
2,498,272	+				-0.3
2,498,272	+				+0.7
2,498,273	-				-0.1
2,498,273	-				-0.1
2,498,273	-				+1.3
2,498,273	-				+1.8
2,498,273	-				-0.2
2,498,273	-				-0.3
2,498,874	+		MPMX19_02374	0.43	+0.1
2,498,874	+		MPMX19_02374	0.43	+1.3
2,498,874	+		MPMX19_02374	0.43	+0.7
2,498,982	+		MPMX19_02374	0.49	-0.2
2,498,982	+		MPMX19_02374	0.49	+0.2
2,498,982	+		MPMX19_02374	0.49	+0.4
2,498,982	+		MPMX19_02374	0.49	-0.3
2,498,982	+		MPMX19_02374	0.49	-0.1
2,498,982	+		MPMX19_02374	0.49	+0.0
2,498,982	+		MPMX19_02374	0.49	+0.8
2,498,982	+		MPMX19_02374	0.49	-1.0
2,498,982	+		MPMX19_02374	0.49	-0.0
2,498,983	-		MPMX19_02374	0.49	-0.0
2,498,983	-		MPMX19_02374	0.49	+0.7
2,498,983	-		MPMX19_02374	0.49	-1.5
2,499,219	+		MPMX19_02374	0.63	-0.3
2,499,219	+		MPMX19_02374	0.63	+1.2
2,499,219	+		MPMX19_02374	0.63	-0.2
2,499,219	+		MPMX19_02374	0.63	+0.7
2,499,220	-		MPMX19_02374	0.63	-1.0
2,499,220	-		MPMX19_02374	0.63	+0.3
2,499,220	-		MPMX19_02374	0.63	-2.4
2,499,220	-		MPMX19_02374	0.63	-1.0
2,499,220	-		MPMX19_02374	0.63	-1.5
2,499,220	-		MPMX19_02374	0.63	+0.0
2,499,298	+		MPMX19_02374	0.68	+0.6
2,499,299	-		MPMX19_02374	0.68	-1.9
2,499,825	+				-0.6
2,499,825	+				-1.2
2,499,825	+				-0.6
2,499,825	+				-1.8
2,499,825	+				-1.0
2,499,825	+				-0.6
2,499,825	+				+0.0
2,499,826	-				-1.8
2,499,826	-				-1.2
2,499,826	-				+1.5
2,499,826	-				+0.2
2,499,826	-				-0.6
2,499,826	-				-0.8
2,499,842	+				-0.6
2,499,843	-				+0.9
2,499,855	+				-2.0
2,499,856	-				+0.7
2,499,892	-				+0.2
2,499,892	-				-1.8
2,499,922	+				+0.6
2,499,922	+				+0.2
2,499,922	+				-2.5
2,499,922	+				+0.0
2,499,922	+				-0.5
2,499,922	+				+2.1
2,499,922	+				-0.8
2,499,922	+				+0.2
2,499,922	+				-0.5
2,499,922	+				-1.6
2,499,922	+				-2.2
2,499,922	+				-0.2
2,499,922	+				-0.4
2,499,922	+				-1.3
2,499,922	+				-1.2
2,499,922	+				+0.7
2,499,922	+				+0.7
2,499,922	+				+0.2
2,499,923	-				-1.3
2,499,923	-				+1.4
2,499,923	-				+0.4
2,499,923	-				-1.6
2,499,923	-				-0.0
2,499,923	-				-1.7
2,499,923	-				-0.6
2,499,923	-				-1.0
2,499,923	-				+0.2
2,499,923	-				+0.7
2,499,923	-				-1.0
2,499,923	-				+0.6
2,499,923	-				+1.1
2,499,923	-				-1.2
2,499,923	-				+1.0
2,499,923	-				+0.2
2,499,923	-				+0.8
2,499,957	+				-0.6
2,499,957	+				+0.0
2,499,957	+				+0.5
2,499,957	+				-1.8
2,499,957	+				-1.0
2,499,958	-				-0.4
2,499,958	-				+0.8
2,499,958	-				+0.8
2,499,994	+				-0.6
2,499,994	+				-0.9
2,499,994	+				+0.5
2,499,994	+				-1.5
2,499,995	-				+0.8
2,499,995	-				+0.8
2,499,995	-				+1.0
2,499,995	-				+0.2
2,499,995	-				-0.9
2,499,995	-				-1.3
2,499,995	-				-0.5
2,499,995	-				+0.4
2,499,995	-				-0.2
2,500,000	+				+0.0
2,500,000	+				-0.3
2,500,000	+				-0.1
2,500,000	+				-0.2
2,500,000	+				-0.1
2,500,000	+				+0.7
2,500,000	+				+0.2
2,500,000	+				-0.5
2,500,001	-				-0.3
2,500,001	-				-1.8
2,500,001	-				-0.8
2,500,022	+				+0.7
2,500,022	+				-0.2
2,500,022	+				+0.8
2,500,022	+				+0.2
2,500,187	+		MPMX19_02375	0.17	+0.2
2,500,187	+		MPMX19_02375	0.17	+0.7
2,500,187	+		MPMX19_02375	0.17	-0.2
2,500,187	+		MPMX19_02375	0.17	-1.0
2,500,188	-		MPMX19_02375	0.17	-1.0
2,500,188	-		MPMX19_02375	0.17	-0.2
2,500,188	-		MPMX19_02375	0.17	+0.0
2,500,188	-		MPMX19_02375	0.17	-1.2
2,500,541	+		MPMX19_02375	0.49	+0.8
2,500,541	+		MPMX19_02375	0.49	-0.4
2,500,541	+		MPMX19_02375	0.49	+0.0
2,500,541	+		MPMX19_02375	0.49	-1.2
2,500,541	+		MPMX19_02375	0.49	+1.1
2,500,541	+		MPMX19_02375	0.49	-1.4
2,500,541	+		MPMX19_02375	0.49	+0.4
2,500,541	+		MPMX19_02375	0.49	-1.3
2,500,541	+		MPMX19_02375	0.49	-1.0
2,500,541	+		MPMX19_02375	0.49	-1.1
2,500,541	+		MPMX19_02375	0.49	-0.5
2,500,541	+		MPMX19_02375	0.49	+1.7
2,500,541	+		MPMX19_02375	0.49	+0.6
2,500,541	+		MPMX19_02375	0.49	-0.1
2,500,541	+		MPMX19_02375	0.49	-2.1
2,500,541	+		MPMX19_02375	0.49	+0.6
2,500,542	-		MPMX19_02375	0.50	-0.8
2,500,542	-		MPMX19_02375	0.50	+0.9
2,500,542	-		MPMX19_02375	0.50	-0.6
2,500,542	-		MPMX19_02375	0.50	+1.0
2,500,542	-		MPMX19_02375	0.50	+0.1
2,500,542	-		MPMX19_02375	0.50	+1.0
2,500,542	-		MPMX19_02375	0.50	-2.4
2,500,542	-		MPMX19_02375	0.50	+0.8
2,500,542	-		MPMX19_02375	0.50	-0.0
2,500,542	-		MPMX19_02375	0.50	-2.8
2,500,542	-		MPMX19_02375	0.50	-0.2
2,500,772	+		MPMX19_02375	0.71	+1.0
2,500,772	+		MPMX19_02375	0.71	-0.5
2,500,772	+		MPMX19_02375	0.71	+0.9
2,500,772	+		MPMX19_02375	0.71	-0.6
2,500,772	+		MPMX19_02375	0.71	-0.6
2,500,772	+		MPMX19_02375	0.71	-0.8
2,500,772	+		MPMX19_02375	0.71	-0.2
2,500,772	+		MPMX19_02375	0.71	+1.2
2,500,772	+		MPMX19_02375	0.71	-0.2
2,500,772	+		MPMX19_02375	0.71	-1.0
2,500,772	+		MPMX19_02375	0.71	-0.6
2,500,772	+		MPMX19_02375	0.71	+0.2
2,500,772	+		MPMX19_02375	0.71	+0.5
2,500,772	+		MPMX19_02375	0.71	-0.8
2,500,772	+		MPMX19_02375	0.71	+0.2
2,500,772	+		MPMX19_02375	0.71	+0.0
2,500,772	+		MPMX19_02375	0.71	+0.2
2,500,772	+		MPMX19_02375	0.71	-0.2
2,500,772	+		MPMX19_02375	0.71	+0.2
2,500,772	+		MPMX19_02375	0.71	-0.3
2,500,772	+		MPMX19_02375	0.71	+0.8
2,500,772	+		MPMX19_02375	0.71	-0.5
2,500,772	+		MPMX19_02375	0.71	-1.3
2,500,772	+		MPMX19_02375	0.71	-1.1
2,500,773	-		MPMX19_02375	0.71	-2.0
2,500,773	-		MPMX19_02375	0.71	-0.6
2,500,773	-		MPMX19_02375	0.71	+0.1
2,500,773	-		MPMX19_02375	0.71	+0.7
2,500,773	-		MPMX19_02375	0.71	-0.2
2,500,773	-		MPMX19_02375	0.71	+1.7
2,500,773	-		MPMX19_02375	0.71	-1.3
2,500,773	-		MPMX19_02375	0.71	-1.8
2,500,773	-		MPMX19_02375	0.71	-1.5
2,500,773	-		MPMX19_02375	0.71	-1.0
2,500,773	-		MPMX19_02375	0.71	+0.5
2,500,773	-		MPMX19_02375	0.71	+0.1
2,500,773	-		MPMX19_02375	0.71	-0.2
2,500,773	-		MPMX19_02375	0.71	-1.1
2,500,814	+		MPMX19_02375	0.74	-1.2
2,500,814	+		MPMX19_02375	0.74	+1.0
2,500,814	+		MPMX19_02375	0.74	+0.4
2,500,814	+		MPMX19_02375	0.74	+0.2
2,500,814	+		MPMX19_02375	0.74	-1.2
2,500,814	+		MPMX19_02375	0.74	+0.8
2,500,814	+		MPMX19_02375	0.74	-0.2
2,500,814	+		MPMX19_02375	0.74	-0.8
2,500,814	+		MPMX19_02375	0.74	-0.7
2,500,814	+		MPMX19_02375	0.74	-0.3
2,500,814	+		MPMX19_02375	0.74	+0.4
2,500,814	+		MPMX19_02375	0.74	-1.3
2,500,814	+		MPMX19_02375	0.74	-0.5
2,500,814	+		MPMX19_02375	0.74	+0.3
2,500,814	+		MPMX19_02375	0.74	-1.5
2,500,814	+		MPMX19_02375	0.74	-0.1
2,500,814	+		MPMX19_02375	0.74	-0.8
2,500,814	+		MPMX19_02375	0.74	-0.1
2,500,814	+		MPMX19_02375	0.74	+0.4
2,500,814	+		MPMX19_02375	0.74	-1.6
2,500,814	+		MPMX19_02375	0.74	+0.6
2,500,814	+		MPMX19_02375	0.74	-0.0
2,500,814	+		MPMX19_02375	0.74	-0.1
2,500,814	+		MPMX19_02375	0.74	-1.2
2,500,815	-		MPMX19_02375	0.75	-0.8
2,500,815	-		MPMX19_02375	0.75	+0.6
2,500,815	-		MPMX19_02375	0.75	+0.5
2,500,815	-		MPMX19_02375	0.75	+0.4
2,500,815	-		MPMX19_02375	0.75	-0.7
2,500,815	-		MPMX19_02375	0.75	+1.0
2,500,815	-		MPMX19_02375	0.75	+0.2
2,500,815	-		MPMX19_02375	0.75	-1.7
2,500,815	-		MPMX19_02375	0.75	-0.8
2,500,815	-		MPMX19_02375	0.75	+0.4
2,500,815	-		MPMX19_02375	0.75	+1.1
2,500,815	-		MPMX19_02375	0.75	-0.4
2,500,815	-		MPMX19_02375	0.75	-2.0
2,500,815	-		MPMX19_02375	0.75	-1.5
2,500,815	-		MPMX19_02375	0.75	-0.5
2,500,815	-		MPMX19_02375	0.75	+0.5
2,500,815	-		MPMX19_02375	0.75	-0.8
2,500,815	-		MPMX19_02375	0.75	-0.3
2,500,815	-		MPMX19_02375	0.75	-0.4
2,500,815	-		MPMX19_02375	0.75	-1.2
2,500,815	-		MPMX19_02375	0.75	-0.8
2,500,815	-		MPMX19_02375	0.75	+0.3
2,500,815	-		MPMX19_02375	0.75	+0.4