Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02274

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,393,560	+				-1.5
2,393,560	+				-1.4
2,393,560	+				-1.9
2,393,560	+				+0.1
2,393,560	+				-1.4
2,393,560	+				-0.5
2,393,560	+				-1.0
2,393,560	+				-0.6
2,393,560	+				-2.1
2,393,560	+				-0.9
2,393,560	+				-0.8
2,393,560	+				-0.6
2,393,560	+				-0.5
2,393,560	+				+0.4
2,393,560	+				+0.7
2,393,561	-				-0.5
2,393,561	-				-0.8
2,393,561	-				+0.7
2,393,561	-				-1.7
2,393,561	-				+0.4
2,393,561	-				+0.2
2,393,568	+				+0.2
2,393,568	+				-1.2
2,393,569	-				+0.2
2,393,662	+				+0.2
2,393,662	+				-0.5
2,393,662	+				-0.9
2,393,662	+				-2.0
2,393,662	+				-0.0
2,393,662	+				-0.5
2,393,662	+				-0.2
2,393,662	+				+0.6
2,393,662	+				-1.0
2,393,662	+				-1.8
2,393,662	+				-1.2
2,393,662	+				+0.4
2,393,662	+				-0.5
2,393,662	+				-0.5
2,393,662	+				-0.5
2,393,662	+				-2.0
2,393,662	+				+0.8
2,393,662	+				+0.5
2,393,662	+				-1.2
2,393,662	+				-0.5
2,393,663	-				+0.2
2,393,663	-				+0.2
2,393,663	-				+0.6
2,393,663	-				-0.9
2,393,663	-				+1.0
2,393,663	-				-0.4
2,393,663	-				+0.9
2,393,663	-				-2.3
2,393,663	-				+0.2
2,393,663	-				-1.0
2,393,663	-				-0.4
2,393,663	-				-0.0
2,393,663	-				+0.1
2,393,663	-				+0.2
2,393,663	-				-0.2
2,393,663	-				-0.3
2,393,663	-				-1.6
2,393,781	+				-1.0
2,393,781	+				+2.2
2,393,782	-				+0.7
2,393,782	-				-1.0
2,394,014	+				-1.2
2,394,014	+				+0.5
2,394,014	+				+0.5
2,394,014	+				+1.0
2,394,014	+				+0.1
2,394,014	+				-0.2
2,394,014	+				-0.0
2,394,014	+				-0.1
2,394,014	+				+0.1
2,394,014	+				-0.2
2,394,014	+				+0.1
2,394,014	+				-1.0
2,394,014	+				+1.0
2,394,014	+				+2.0
2,394,014	+				+1.5
2,394,015	-				+0.8
2,394,015	-				+0.8
2,394,015	-				-0.7
2,394,015	-				-1.5
2,394,015	-				+0.8
2,394,015	-				-0.9
2,394,015	-				-0.8
2,394,015	-				-1.1
2,394,015	-				-0.1
2,394,015	-				-1.0
2,394,015	-				+0.3
2,394,015	-				+1.8
2,394,054	+				+0.1
2,394,054	+				-0.4
2,394,054	+				-0.0
2,394,054	+				-0.8
2,394,054	+				+0.6
2,394,054	+				+0.5
2,394,054	+				+0.5
2,394,054	+				-0.2
2,394,054	+				-0.2
2,394,054	+				-0.9
2,394,054	+				+0.3
2,394,054	+				-0.8
2,394,054	+				-1.1
2,394,054	+				-2.5
2,394,054	+				-1.3
2,394,054	+				-0.4
2,394,054	+				+0.5
2,394,054	+				+1.8
2,394,054	+				+0.1
2,394,054	+				+0.8
2,394,054	+				+0.2
2,394,054	+				-0.2
2,394,054	+				+0.5
2,394,054	+				-0.5
2,394,055	-				-1.4
2,394,055	-				-0.8
2,394,055	-				-1.4
2,394,055	-				-0.9
2,394,055	-				-1.5
2,394,055	-				-0.5
2,394,055	-				+0.6
2,394,055	-				-0.3
2,394,055	-				+0.2
2,394,055	-				-0.2
2,394,055	-				+0.1
2,394,055	-				-0.8
2,394,055	-				+0.1
2,394,055	-				-2.3
2,394,055	-				-1.4
2,394,055	-				-1.4
2,394,055	-				+0.4
2,394,055	-				-0.8
2,394,055	-				-1.4
2,394,055	-				-1.2
2,394,055	-				+0.2
2,394,055	-				-1.8
2,394,253	+		MPMX19_02273	0.61	-0.6
2,394,253	+		MPMX19_02273	0.61	+2.8
2,394,253	+		MPMX19_02273	0.61	-0.0
2,394,253	+		MPMX19_02273	0.61	-0.3
2,394,253	+		MPMX19_02273	0.61	-0.2
2,394,253	+		MPMX19_02273	0.61	-0.7
2,394,253	+		MPMX19_02273	0.61	-1.2
2,394,253	+		MPMX19_02273	0.61	+0.9
2,394,253	+		MPMX19_02273	0.61	-1.0
2,394,253	+		MPMX19_02273	0.61	-0.2
2,394,253	+		MPMX19_02273	0.61	+0.6
2,394,253	+		MPMX19_02273	0.61	-0.5
2,394,253	+		MPMX19_02273	0.61	-0.6
2,394,253	+		MPMX19_02273	0.61	-1.5
2,394,253	+		MPMX19_02273	0.61	-1.3
2,394,253	+		MPMX19_02273	0.61	-0.2
2,394,253	+		MPMX19_02273	0.61	+1.1
2,394,253	+		MPMX19_02273	0.61	+1.7
2,394,254	-		MPMX19_02273	0.62	-0.2
2,394,254	-		MPMX19_02273	0.62	-1.1
2,394,254	-		MPMX19_02273	0.62	-0.7
2,394,254	-		MPMX19_02273	0.62	-1.9
2,394,254	-		MPMX19_02273	0.62	-0.4
2,394,254	-		MPMX19_02273	0.62	-0.6
2,394,254	-		MPMX19_02273	0.62	+0.6
2,394,254	-		MPMX19_02273	0.62	-0.6
2,394,254	-		MPMX19_02273	0.62	-0.6
2,394,254	-		MPMX19_02273	0.62	+1.2
2,394,254	-		MPMX19_02273	0.62	-0.4
2,394,254	-		MPMX19_02273	0.62	+0.1
2,394,254	-		MPMX19_02273	0.62	-1.8
2,394,254	-		MPMX19_02273	0.62	-1.5
2,394,254	-		MPMX19_02273	0.62	-1.2
2,394,254	-		MPMX19_02273	0.62	-1.5
2,394,254	-		MPMX19_02273	0.62	-0.7
2,394,254	-		MPMX19_02273	0.62	+0.1
2,394,254	-		MPMX19_02273	0.62	-0.6
2,394,254	-		MPMX19_02273	0.62	-0.8
2,394,254	-		MPMX19_02273	0.62	-2.4
2,394,254	-		MPMX19_02273	0.62	-1.1
2,394,254	-		MPMX19_02273	0.62	+0.9
2,394,254	-		MPMX19_02273	0.62	-1.6
2,394,254	-		MPMX19_02273	0.62	-1.2
2,394,256	+		MPMX19_02273	0.62	+0.1
2,394,256	+		MPMX19_02273	0.62	-0.9
2,394,256	+		MPMX19_02273	0.62	-0.1
2,394,256	+		MPMX19_02273	0.62	-1.1
2,394,256	+		MPMX19_02273	0.62	-0.1
2,394,256	+		MPMX19_02273	0.62	+0.5
2,394,256	+		MPMX19_02273	0.62	+1.8
2,394,256	+		MPMX19_02273	0.62	-1.0
2,394,256	+		MPMX19_02273	0.62	-0.6
2,394,256	+		MPMX19_02273	0.62	+0.2
2,394,257	-		MPMX19_02273	0.63	+0.1
2,394,257	-		MPMX19_02273	0.63	-0.1
2,394,257	-		MPMX19_02273	0.63	+0.3
2,394,257	-		MPMX19_02273	0.63	+0.4
2,394,257	-		MPMX19_02273	0.63	-1.0
2,394,257	-		MPMX19_02273	0.63	-1.5
2,394,272	+		MPMX19_02273	0.68	-0.5
2,394,272	+		MPMX19_02273	0.68	+0.5
2,394,272	+		MPMX19_02273	0.68	+0.4
2,394,272	+		MPMX19_02273	0.68	-2.0
2,394,272	+		MPMX19_02273	0.68	-2.1
2,394,272	+		MPMX19_02273	0.68	+0.3
2,394,272	+		MPMX19_02273	0.68	-1.7
2,394,272	+		MPMX19_02273	0.68	-0.4
2,394,272	+		MPMX19_02273	0.68	-0.1
2,394,272	+		MPMX19_02273	0.68	+0.4
2,394,272	+		MPMX19_02273	0.68	-1.6
2,394,272	+		MPMX19_02273	0.68	-0.5
2,394,272	+		MPMX19_02273	0.68	-1.2
2,394,272	+		MPMX19_02273	0.68	-1.5
2,394,272	+		MPMX19_02273	0.68	-0.5
2,394,272	+		MPMX19_02273	0.68	+1.2
2,394,272	+		MPMX19_02273	0.68	-2.9
2,394,272	+		MPMX19_02273	0.68	-0.2
2,394,273	-		MPMX19_02273	0.68	-0.3
2,394,273	-		MPMX19_02273	0.68	-1.2
2,394,273	-		MPMX19_02273	0.68	-1.5
2,394,273	-		MPMX19_02273	0.68	-0.2
2,394,273	-		MPMX19_02273	0.68	-0.2
2,394,273	-		MPMX19_02273	0.68	-0.1
2,394,273	-		MPMX19_02273	0.68	-0.8
2,394,273	-		MPMX19_02273	0.68	-0.1
2,394,273	-		MPMX19_02273	0.68	-0.4
2,394,273	-		MPMX19_02273	0.68	+0.4
2,394,273	-		MPMX19_02273	0.68	-1.7
2,394,273	-		MPMX19_02273	0.68	-0.8
2,394,273	-		MPMX19_02273	0.68	-1.2
2,394,273	-		MPMX19_02273	0.68	+0.6
2,394,273	-		MPMX19_02273	0.68	-1.1
2,394,273	-		MPMX19_02273	0.68	-1.3
2,394,442	+				-0.9
2,394,442	+				-1.0
2,394,442	+				-1.6
2,394,442	+				-0.0
2,394,442	+				+0.1
2,394,442	+				-1.2
2,394,442	+				-0.0
2,394,442	+				-0.6
2,394,442	+				-0.8
2,394,442	+				-2.0
2,394,442	+				-0.8
2,394,442	+				-1.8
2,394,442	+				-1.7
2,394,442	+				+0.2
2,394,442	+				-0.9
2,394,442	+				-0.8
2,394,442	+				-1.0
2,394,442	+				+0.7
2,394,442	+				-0.8
2,394,442	+				+0.2
2,394,442	+				+1.8
2,394,442	+				-1.2
2,394,442	+				-1.1
2,394,442	+				+0.6
2,394,442	+				+1.5
2,394,442	+				-1.9
2,394,442	+				+0.2
2,394,443	-				-0.9
2,394,443	-				+0.3
2,394,443	-				-0.2
2,394,443	-				-0.4
2,394,443	-				-0.5
2,394,443	-				+0.0
2,394,443	-				-0.3
2,394,443	-				-0.8
2,394,443	-				-2.2
2,394,443	-				-1.5
2,394,443	-				+1.4
2,394,443	-				+0.3
2,394,443	-				+0.6
2,394,443	-				+0.4
2,394,443	-				-0.2
2,394,443	-				-0.3
2,394,443	-				+0.8
2,394,443	-				-0.0
2,394,443	-				+0.4
2,394,443	-				-1.6
2,394,443	-				-0.5
2,394,443	-				-0.2
2,394,443	-				-0.3
2,394,518	+				-0.4
2,394,518	+				-1.2
2,394,519	-				+0.1
2,394,553	+				+0.6
2,394,553	+				+0.5
2,394,553	+				-0.8
2,394,554	-				+0.2
2,394,554	-				+0.3
2,394,554	-				+0.6
2,394,554	-				-0.3
2,394,554	-				+0.1
2,394,554	-				-1.0
2,394,554	-				+0.2
2,394,559	+				+0.0
2,394,559	+				-1.7
2,394,559	+				-0.3
2,394,559	+				-0.5
2,394,559	+				-0.2
2,394,559	+				-0.1
2,394,559	+				+0.8
2,394,559	+				-0.1
2,394,559	+				+0.8
2,394,560	-				-0.6
2,394,560	-				-0.8
2,394,560	-				-2.7
2,394,560	-				-1.2
2,394,560	-				-1.1
2,394,560	-				-1.6
2,394,560	-				-0.4
2,394,560	-				-1.0
2,394,560	-				-0.7
2,394,669	+				+0.2
2,394,669	+				+1.2
2,394,670	-				-1.7
2,394,670	-				-0.8
2,394,740	+				-0.7
2,394,740	+				-1.7
2,394,740	+				-0.3
2,394,740	+				-0.2
2,394,740	+				-0.5
2,394,740	+				+1.5
2,394,740	+				-0.5
2,394,740	+				-0.9
2,394,740	+				-0.0
2,394,740	+				-1.3
2,394,740	+				-3.2
2,394,740	+				-1.6
2,394,740	+				-1.4
2,394,740	+				-0.7
2,394,741	-				-0.3
2,394,741	-				-0.8
2,394,741	-				+1.1
2,394,741	-				-0.6
2,394,741	-				+0.4
2,394,741	-				+0.4
2,394,741	-				-0.2
2,394,741	-				-0.9
2,394,741	-				-0.7
2,394,741	-				+1.2
2,394,741	-				-0.6
2,394,741	-				-0.1
2,394,837	+				-1.2
2,394,837	+				+0.2
2,394,837	+				-0.8
2,394,837	+				-1.9
2,394,837	+				+0.5
2,394,837	+				+0.1
2,394,838	-				-0.7
2,394,838	-				+0.4
2,394,838	-				-1.6
2,394,895	-				-0.2
2,394,909	+				-3.1
2,394,909	+				-1.4
2,394,909	+				+0.2
2,394,909	+				-1.1
2,394,909	+				+0.6
2,394,909	+				-1.8
2,394,909	+				+0.1
2,394,909	+				+0.8
2,394,909	+				-1.1
2,394,910	-				+0.6
2,394,910	-				+0.1
2,394,910	-				-2.4
2,394,910	-				-0.4
2,394,910	-				+0.6
2,394,910	-				-1.4
2,394,910	-				-2.1
2,394,910	-				+0.2
2,394,910	-				+0.7
2,394,921	+				-0.8
2,394,921	+				+0.2
2,394,921	+				-0.3
2,394,921	+				+0.8
2,394,922	-				-0.5
2,394,922	-				-0.4
2,394,922	-				+0.5
2,394,922	-				-1.4
2,394,922	-				-0.6
2,394,922	-				-1.3
2,394,993	+				-1.5
2,394,993	+				+0.2
2,394,993	+				-1.9
2,394,993	+				+0.8
2,394,993	+				-0.8
2,394,993	+				-0.1
2,394,993	+				-0.6
2,394,994	-				-0.3
2,394,994	-				+0.4
2,394,994	-				-1.7
2,394,994	-				-1.0
2,394,994	-				-0.4
2,394,994	-				-0.4
2,394,994	-				-2.7
2,394,994	-				-0.5
2,395,067	+				-2.5
2,395,067	+				-0.8
2,395,068	-				-1.4
2,395,124	+				-0.1
2,395,124	+				+0.8
2,395,124	+				-1.2
2,395,124	+				+2.0
2,395,125	-				-0.2
2,395,125	-				-0.1
2,395,125	-				+1.1
2,395,125	-				-0.5
2,395,125	-				-0.0
2,395,233	+				-0.1
2,395,233	+				-0.4
2,395,233	+				-1.0
2,395,233	+				-0.7
2,395,233	+				-0.6
2,395,233	+				-1.8
2,395,233	+				-1.2
2,395,233	+				-0.0
2,395,233	+				-0.2
2,395,233	+				+0.5
2,395,233	+				-0.9
2,395,233	+				-1.4
2,395,234	-				+0.5
2,395,234	-				-0.8
2,395,234	-				+1.4
2,395,234	-				-0.0
2,395,234	-				-1.2
2,395,234	-				+0.4
2,395,234	-				-1.9
2,395,234	-				-0.1
2,395,234	-				-0.6
2,395,234	-				+0.5
2,395,234	-				+0.5
2,395,234	-				+0.4
2,395,343	+				+0.2
2,395,343	+				-1.0
2,395,343	+				-0.1
2,395,343	+				+0.1
2,395,343	+				+1.8
2,395,343	+				-0.8
2,395,343	+				+0.4
2,395,343	+				+1.0
2,395,343	+				+0.4
2,395,343	+				-0.2
2,395,343	+				-0.4
2,395,343	+				-0.3
2,395,343	+				+2.1
2,395,343	+				+0.5
2,395,343	+				+0.4
2,395,343	+				+1.2
2,395,343	+				+0.2
2,395,344	-				-0.7
2,395,344	-				+0.8
2,395,344	-				-0.6
2,395,344	-				-0.7
2,395,344	-				-1.3
2,395,344	-				-0.4
2,395,344	-				+0.4
2,395,344	-				-0.1
2,395,344	-				+1.3
2,395,344	-				-1.5
2,395,344	-				-0.4
2,395,344	-				-0.4
2,395,344	-				+0.5
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2,395,344	-				-1.7
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2,395,401	+				-0.7
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2,395,401	+				+0.2
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2,395,401	+				+0.3
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2,395,402	-				-1.2
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2,395,402	-				-0.7
2,395,402	-				+0.3
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2,395,406	+				-0.2
2,395,406	+				-0.0
2,395,406	+				-1.3
2,395,406	+				-2.5
2,395,406	+				-1.1
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2,395,533	+		MPMX19_02275	0.27	-0.4
2,395,533	+		MPMX19_02275	0.27	-0.1
2,395,533	+		MPMX19_02275	0.27	+1.4
2,395,534	-		MPMX19_02275	0.27	-0.5
2,395,534	-		MPMX19_02275	0.27	+0.5
2,395,534	-		MPMX19_02275	0.27	+0.4
2,395,534	-		MPMX19_02275	0.27	-0.5
2,395,534	-		MPMX19_02275	0.27	-1.4