Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02190

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,290,898	+				+0.2
2,290,898	+				-1.3
2,290,898	+				-0.3
2,290,898	+				-1.6
2,290,898	+				-0.8
2,290,898	+				+1.4
2,290,899	-				-0.6
2,290,899	-				+0.3
2,290,899	-				-0.1
2,290,899	-				-0.0
2,290,899	-				+1.2
2,290,899	-				-0.1
2,290,899	-				-1.1
2,290,899	-				-0.8
2,290,899	-				+0.7
2,290,899	-				-1.5
2,290,899	-				-0.4
2,290,899	-				-0.3
2,290,899	-				-0.4
2,290,976	+				+0.7
2,290,976	+				-1.8
2,290,976	+				+0.4
2,290,977	-				-0.8
2,290,977	-				+0.2
2,290,977	-				+0.7
2,290,977	-				+0.1
2,290,977	-				+0.1
2,290,977	-				+0.3
2,290,977	-				-1.0
2,291,069	+		MPMX19_02189	0.17	+0.7
2,291,069	+		MPMX19_02189	0.17	+0.3
2,291,069	+		MPMX19_02189	0.17	-2.0
2,291,069	+		MPMX19_02189	0.17	+1.3
2,291,069	+		MPMX19_02189	0.17	-0.1
2,291,069	+		MPMX19_02189	0.17	+0.7
2,291,069	+		MPMX19_02189	0.17	+0.0
2,291,069	+		MPMX19_02189	0.17	-0.1
2,291,069	+		MPMX19_02189	0.17	-0.5
2,291,069	+		MPMX19_02189	0.17	+0.1
2,291,069	+		MPMX19_02189	0.17	-0.3
2,291,069	+		MPMX19_02189	0.17	-1.2
2,291,069	+		MPMX19_02189	0.17	+0.3
2,291,069	+		MPMX19_02189	0.17	-0.7
2,291,069	+		MPMX19_02189	0.17	-1.1
2,291,069	+		MPMX19_02189	0.17	+0.9
2,291,069	+		MPMX19_02189	0.17	+1.1
2,291,069	+		MPMX19_02189	0.17	-1.1
2,291,069	+		MPMX19_02189	0.17	+1.4
2,291,069	+		MPMX19_02189	0.17	-1.3
2,291,069	+		MPMX19_02189	0.17	-0.8
2,291,069	+		MPMX19_02189	0.17	-0.3
2,291,069	+		MPMX19_02189	0.17	-0.3
2,291,069	+		MPMX19_02189	0.17	-2.1
2,291,070	-		MPMX19_02189	0.18	+1.0
2,291,070	-		MPMX19_02189	0.18	-2.3
2,291,070	-		MPMX19_02189	0.18	-1.4
2,291,070	-		MPMX19_02189	0.18	-1.0
2,291,070	-		MPMX19_02189	0.18	-1.1
2,291,070	-		MPMX19_02189	0.18	-0.3
2,291,070	-		MPMX19_02189	0.18	-0.1
2,291,070	-		MPMX19_02189	0.18	+0.3
2,291,070	-		MPMX19_02189	0.18	+0.5
2,291,070	-		MPMX19_02189	0.18	+0.7
2,291,070	-		MPMX19_02189	0.18	-0.7
2,291,070	-		MPMX19_02189	0.18	-1.4
2,291,070	-		MPMX19_02189	0.18	-0.7
2,291,070	-		MPMX19_02189	0.18	+0.3
2,291,070	-		MPMX19_02189	0.18	+0.4
2,291,070	-		MPMX19_02189	0.18	+3.3
2,291,070	-		MPMX19_02189	0.18	-1.0
2,291,070	-		MPMX19_02189	0.18	+0.2
2,291,070	-		MPMX19_02189	0.18	+0.6
2,291,596	+				-1.4
2,291,596	+				-1.1
2,291,596	+				-0.4
2,291,596	+				+0.2
2,291,596	+				-0.1
2,291,596	+				-0.1
2,291,596	+				-0.6
2,291,596	+				-1.7
2,291,596	+				+0.6
2,291,596	+				+0.1
2,291,596	+				-0.4
2,291,596	+				+0.3
2,291,596	+				+1.1
2,291,596	+				-0.9
2,291,596	+				-1.4
2,291,597	-				-0.4
2,291,597	-				-1.9
2,291,597	-				-1.1
2,291,597	-				-0.6
2,291,597	-				-1.3
2,291,597	-				+0.5
2,291,597	-				+0.8
2,291,597	-				-0.3
2,291,597	-				-0.1
2,291,842	+		MPMX19_02190	0.15	+0.4
2,291,842	+		MPMX19_02190	0.15	+0.0
2,291,842	+		MPMX19_02190	0.15	+1.3
2,291,842	+		MPMX19_02190	0.15	-0.4
2,291,842	+		MPMX19_02190	0.15	-2.1
2,291,842	+		MPMX19_02190	0.15	-1.3
2,291,842	+		MPMX19_02190	0.15	+0.5
2,291,842	+		MPMX19_02190	0.15	-0.8
2,291,842	+		MPMX19_02190	0.15	-0.6
2,291,842	+		MPMX19_02190	0.15	-0.8
2,291,843	-		MPMX19_02190	0.15	+0.5
2,291,843	-		MPMX19_02190	0.15	-2.1
2,291,843	-		MPMX19_02190	0.15	+0.6
2,291,843	-		MPMX19_02190	0.15	-2.9
2,291,843	-		MPMX19_02190	0.15	-0.6
2,291,843	-		MPMX19_02190	0.15	+0.6
2,291,843	-		MPMX19_02190	0.15	-0.6
2,291,866	+		MPMX19_02190	0.17	-0.1
2,291,866	+		MPMX19_02190	0.17	-0.3
2,291,866	+		MPMX19_02190	0.17	-1.4
2,291,866	+		MPMX19_02190	0.17	-0.6
2,291,866	+		MPMX19_02190	0.17	-0.8
2,291,867	-		MPMX19_02190	0.17	-1.7
2,291,867	-		MPMX19_02190	0.17	-1.4
2,291,867	-		MPMX19_02190	0.17	+1.6
2,291,867	-		MPMX19_02190	0.17	+0.2
2,291,867	-		MPMX19_02190	0.17	+0.0
2,291,867	-		MPMX19_02190	0.17	+0.4
2,291,867	-		MPMX19_02190	0.17	-0.3
2,291,867	-		MPMX19_02190	0.17	-0.6
2,291,867	-		MPMX19_02190	0.17	+0.2
2,291,893	+		MPMX19_02190	0.18	-0.8
2,291,893	+		MPMX19_02190	0.18	+1.7
2,291,893	+		MPMX19_02190	0.18	+0.0
2,291,893	+		MPMX19_02190	0.18	-1.1
2,292,115	+		MPMX19_02190	0.32	-1.1
2,292,115	+		MPMX19_02190	0.32	+0.3
2,292,115	+		MPMX19_02190	0.32	+0.7
2,292,115	+		MPMX19_02190	0.32	-0.1
2,292,115	+		MPMX19_02190	0.32	-1.6
2,292,116	-		MPMX19_02190	0.32	-0.3
2,292,116	-		MPMX19_02190	0.32	-1.6
2,292,116	-		MPMX19_02190	0.32	-2.3
2,292,116	-		MPMX19_02190	0.32	-0.8
2,292,116	-		MPMX19_02190	0.32	-0.5
2,292,151	+		MPMX19_02190	0.34	+0.9
2,292,151	+		MPMX19_02190	0.34	+0.9
2,292,151	+		MPMX19_02190	0.34	-0.1
2,292,151	+		MPMX19_02190	0.34	-0.9
2,292,152	-		MPMX19_02190	0.34	+0.8
2,292,152	-		MPMX19_02190	0.34	-2.1
2,292,152	-		MPMX19_02190	0.34	-0.7
2,292,152	-		MPMX19_02190	0.34	+0.2
2,292,152	-		MPMX19_02190	0.34	+1.3
2,292,152	-		MPMX19_02190	0.34	+0.5
2,292,343	+		MPMX19_02190	0.46	-1.3
2,292,343	+		MPMX19_02190	0.46	+0.3
2,292,343	+		MPMX19_02190	0.46	-2.0
2,292,343	+		MPMX19_02190	0.46	-0.4
2,292,343	+		MPMX19_02190	0.46	-0.8
2,292,343	+		MPMX19_02190	0.46	-1.4
2,292,343	+		MPMX19_02190	0.46	-0.8
2,292,343	+		MPMX19_02190	0.46	+1.7
2,292,343	+		MPMX19_02190	0.46	+0.7
2,292,343	+		MPMX19_02190	0.46	+0.7
2,292,343	+		MPMX19_02190	0.46	-1.0
2,292,344	-		MPMX19_02190	0.46	+1.1
2,292,344	-		MPMX19_02190	0.46	+0.2
2,292,344	-		MPMX19_02190	0.46	-0.0
2,292,344	-		MPMX19_02190	0.46	-1.3
2,292,344	-		MPMX19_02190	0.46	+1.7
2,292,658	+		MPMX19_02190	0.65	-0.3
2,292,658	+		MPMX19_02190	0.65	+0.2
2,292,658	+		MPMX19_02190	0.65	-0.3
2,292,658	+		MPMX19_02190	0.65	+1.5
2,292,658	+		MPMX19_02190	0.65	-1.4
2,292,658	+		MPMX19_02190	0.65	+0.7
2,292,659	-		MPMX19_02190	0.65	+0.7
2,292,659	-		MPMX19_02190	0.65	+0.3
2,292,659	-		MPMX19_02190	0.65	-0.7
2,292,659	-		MPMX19_02190	0.65	-0.8
2,292,659	-		MPMX19_02190	0.65	+1.3
2,292,659	-		MPMX19_02190	0.65	-0.8
2,292,659	-		MPMX19_02190	0.65	+0.4
2,293,057	+		MPMX19_02190	0.89	+1.3
2,293,057	+		MPMX19_02190	0.89	+0.3
2,293,057	+		MPMX19_02190	0.89	-1.7
2,293,057	+		MPMX19_02190	0.89	+2.2
2,293,057	+		MPMX19_02190	0.89	-2.4
2,293,057	+		MPMX19_02190	0.89	-0.8
2,293,057	+		MPMX19_02190	0.89	+0.2
2,293,057	+		MPMX19_02190	0.89	-0.2
2,293,057	+		MPMX19_02190	0.89	+1.2
2,293,057	+		MPMX19_02190	0.89	-0.5
2,293,057	+		MPMX19_02190	0.89	-1.1
2,293,057	+		MPMX19_02190	0.89	-1.4
2,293,058	-		MPMX19_02190	0.89	+1.1
2,293,058	-		MPMX19_02190	0.89	-1.7
2,293,058	-		MPMX19_02190	0.89	+0.7
2,293,058	-		MPMX19_02190	0.89	-0.5
2,293,058	-		MPMX19_02190	0.89	-0.6
2,293,058	-		MPMX19_02190	0.89	+1.9
2,293,058	-		MPMX19_02190	0.89	+1.1
2,293,058	-		MPMX19_02190	0.89	+1.7
2,293,058	-		MPMX19_02190	0.89	-1.4
2,293,058	-		MPMX19_02190	0.89	-0.3
2,293,058	-		MPMX19_02190	0.89	+1.9
2,293,058	-		MPMX19_02190	0.89	-0.3
2,293,058	-		MPMX19_02190	0.89	+1.7
2,293,058	-		MPMX19_02190	0.89	-0.3
2,293,060	+		MPMX19_02190	0.89	+0.7
2,293,060	+		MPMX19_02190	0.89	+0.8
2,293,060	+		MPMX19_02190	0.89	-0.1
2,293,060	+		MPMX19_02190	0.89	+0.7
2,293,060	+		MPMX19_02190	0.89	+0.7
2,293,060	+		MPMX19_02190	0.89	-0.4
2,293,060	+		MPMX19_02190	0.89	-0.4
2,293,060	+		MPMX19_02190	0.89	+0.0
2,293,060	+		MPMX19_02190	0.89	-1.1
2,293,060	+		MPMX19_02190	0.89	+1.4
2,293,060	+		MPMX19_02190	0.89	-1.4
2,293,060	+		MPMX19_02190	0.89	-1.4
2,293,060	+		MPMX19_02190	0.89	+0.2
2,293,060	+		MPMX19_02190	0.89	+0.7
2,293,060	+		MPMX19_02190	0.89	+0.7
2,293,060	+		MPMX19_02190	0.89	-1.0
2,293,060	+		MPMX19_02190	0.89	+0.2
2,293,060	+		MPMX19_02190	0.89	-0.0
2,293,060	+		MPMX19_02190	0.89	+0.5
2,293,060	+		MPMX19_02190	0.89	-0.5
2,293,060	+		MPMX19_02190	0.89	-0.4
2,293,060	+		MPMX19_02190	0.89	+2.5
2,293,060	+		MPMX19_02190	0.89	-1.6
2,293,060	+		MPMX19_02190	0.89	-0.3
2,293,060	+		MPMX19_02190	0.89	-0.6
2,293,060	+		MPMX19_02190	0.89	-1.5
2,293,060	+		MPMX19_02190	0.89	-1.1
2,293,060	+		MPMX19_02190	0.89	-0.4
2,293,060	+		MPMX19_02190	0.89	-0.4
2,293,060	+		MPMX19_02190	0.89	+0.2
2,293,060	+		MPMX19_02190	0.89	-1.3
2,293,060	+		MPMX19_02190	0.89	-0.6
2,293,060	+		MPMX19_02190	0.89	-0.8
2,293,061	-		MPMX19_02190	0.89	+1.7
2,293,061	-		MPMX19_02190	0.89	+0.5
2,293,061	-		MPMX19_02190	0.89	+1.4
2,293,061	-		MPMX19_02190	0.89	+0.2
2,293,061	-		MPMX19_02190	0.89	+0.3
2,293,061	-		MPMX19_02190	0.89	-1.4
2,293,061	-		MPMX19_02190	0.89	+0.2
2,293,061	-		MPMX19_02190	0.89	+0.2
2,293,061	-		MPMX19_02190	0.89	-1.3
2,293,061	-		MPMX19_02190	0.89	+0.2
2,293,061	-		MPMX19_02190	0.89	+2.1
2,293,061	-		MPMX19_02190	0.89	-0.2
2,293,061	-		MPMX19_02190	0.89	-0.4
2,293,061	-		MPMX19_02190	0.89	+0.3
2,293,061	-		MPMX19_02190	0.89	+1.5
2,293,061	-		MPMX19_02190	0.89	-2.1
2,293,061	-		MPMX19_02190	0.89	+1.1
2,293,061	-		MPMX19_02190	0.89	+0.7
2,293,061	-		MPMX19_02190	0.89	-1.9
2,293,061	-		MPMX19_02190	0.89	+1.2
2,293,061	-		MPMX19_02190	0.89	+0.2
2,293,061	-		MPMX19_02190	0.89	-1.6
2,293,061	-		MPMX19_02190	0.89	-0.3
2,293,061	-		MPMX19_02190	0.89	+0.0
2,293,061	-		MPMX19_02190	0.89	-0.8
2,293,238	+				+0.2
2,293,238	+				+0.8
2,293,239	-				-1.3
2,293,239	-				-0.7
2,293,239	-				-0.3
2,293,239	-				-0.7
2,293,239	-				-0.8
2,293,239	-				-1.3
2,293,239	-				+0.7
2,293,278	+				-0.3
2,293,279	-				-1.1
2,293,361	+				+1.0
2,293,361	+				+0.4
2,293,362	-				-2.1
2,293,362	-				-0.8
2,293,362	-				-1.1
2,293,384	+				-0.3
2,293,384	+				-0.2
2,293,384	+				-1.0
2,293,384	+				-0.3
2,293,384	+				+0.2
2,293,384	+				-0.4
2,293,384	+				-1.1
2,293,384	+				-2.3
2,293,384	+				-0.4
2,293,384	+				-0.1
2,293,384	+				-1.0
2,293,384	+				-1.3
2,293,384	+				-0.1
2,293,384	+				-0.9
2,293,384	+				+0.7
2,293,384	+				-0.7
2,293,384	+				-0.5
2,293,384	+				-0.3
2,293,384	+				-2.0
2,293,384	+				+0.7
2,293,384	+				+2.2
2,293,384	+				-0.4
2,293,384	+				-1.7
2,293,384	+				+0.7
2,293,384	+				+0.5
2,293,384	+				-1.2
2,293,384	+				+1.2
2,293,384	+				+0.8
2,293,384	+				+0.5
2,293,385	-				-0.6
2,293,385	-				-0.6
2,293,385	-				+0.7
2,293,385	-				-1.3
2,293,385	-				-0.1
2,293,385	-				+1.4
2,293,385	-				+0.5
2,293,385	-				-1.4
2,293,385	-				-0.4
2,293,385	-				+0.2
2,293,385	-				-0.8
2,293,385	-				-1.3
2,293,385	-				-0.3
2,293,385	-				-1.3
2,293,385	-				-0.7
2,293,385	-				-0.7
2,293,385	-				-0.8
2,293,385	-				-2.3
2,293,385	-				+0.7
2,293,385	-				+0.4
2,293,385	-				-1.5
2,293,385	-				+0.3
2,293,385	-				-0.9
2,293,385	-				-1.6
2,293,483	+				-0.8
2,293,483	+				+0.8
2,293,483	+				-1.3
2,293,483	+				+1.1
2,293,483	+				-0.8
2,293,483	+				-0.8
2,293,484	-				-2.1
2,293,484	-				+0.5
2,293,484	-				-0.4
2,293,484	-				-0.1
2,293,484	-				-0.8
2,293,484	-				-1.1
2,293,926	-		MPMX19_02191	0.36	+0.7
2,293,926	-		MPMX19_02191	0.36	+1.7
2,293,926	-		MPMX19_02191	0.36	+0.7