Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02072

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,166,887	+				+0.6
2,166,887	+				+0.5
2,166,888	-				-1.8
2,167,013	+		MPMX19_02071	0.20	-0.5
2,167,064	+		MPMX19_02071	0.25	-1.3
2,167,065	-		MPMX19_02071	0.25	+0.3
2,167,065	-		MPMX19_02071	0.25	+0.1
2,167,197	-		MPMX19_02071	0.38	-0.3
2,167,211	+		MPMX19_02071	0.39	+2.0
2,167,211	+		MPMX19_02071	0.39	+0.2
2,167,211	+		MPMX19_02071	0.39	-0.1
2,167,211	+		MPMX19_02071	0.39	+0.2
2,167,211	+		MPMX19_02071	0.39	-0.5
2,167,211	+		MPMX19_02071	0.39	+1.2
2,167,211	+		MPMX19_02071	0.39	+0.1
2,167,211	+		MPMX19_02071	0.39	+1.0
2,167,211	+		MPMX19_02071	0.39	-0.0
2,167,211	+		MPMX19_02071	0.39	-1.0
2,167,211	+		MPMX19_02071	0.39	-0.0
2,167,211	+		MPMX19_02071	0.39	-1.0
2,167,212	-		MPMX19_02071	0.39	-0.2
2,167,212	-		MPMX19_02071	0.39	+2.1
2,167,212	-		MPMX19_02071	0.39	+0.1
2,167,212	-		MPMX19_02071	0.39	-0.3
2,167,212	-		MPMX19_02071	0.39	-0.3
2,167,212	-		MPMX19_02071	0.39	-0.8
2,167,212	-		MPMX19_02071	0.39	-0.5
2,167,212	-		MPMX19_02071	0.39	+0.2
2,167,212	-		MPMX19_02071	0.39	-0.9
2,167,212	-		MPMX19_02071	0.39	+1.1
2,167,212	-		MPMX19_02071	0.39	-2.0
2,167,212	-		MPMX19_02071	0.39	+0.9
2,167,212	-		MPMX19_02071	0.39	-1.3
2,167,212	-		MPMX19_02071	0.39	-0.5
2,167,212	-		MPMX19_02071	0.39	+0.9
2,167,212	-		MPMX19_02071	0.39	+0.5
2,167,212	-		MPMX19_02071	0.39	-0.4
2,167,212	-		MPMX19_02071	0.39	-0.6
2,167,212	-		MPMX19_02071	0.39	-0.3
2,167,212	-		MPMX19_02071	0.39	+0.3
2,167,212	-		MPMX19_02071	0.39	-0.5
2,167,212	-		MPMX19_02071	0.39	-1.0
2,167,212	-		MPMX19_02071	0.39	-0.9
2,167,212	-		MPMX19_02071	0.39	-0.5
2,167,256	+		MPMX19_02071	0.43	+0.1
2,167,256	+		MPMX19_02071	0.43	+0.1
2,167,256	+		MPMX19_02071	0.43	-0.6
2,167,257	-		MPMX19_02071	0.43	+0.1
2,167,257	-		MPMX19_02071	0.43	+1.3
2,167,257	-		MPMX19_02071	0.43	+1.4
2,167,257	-		MPMX19_02071	0.43	-0.6
2,167,257	-		MPMX19_02071	0.43	-0.3
2,167,257	-		MPMX19_02071	0.43	-0.8
2,167,257	-		MPMX19_02071	0.43	-2.0
2,167,257	-		MPMX19_02071	0.43	+0.2
2,167,550	+		MPMX19_02071	0.71	-0.6
2,167,550	+		MPMX19_02071	0.71	-0.6
2,167,550	+		MPMX19_02071	0.71	+0.9
2,167,550	+		MPMX19_02071	0.71	+0.6
2,167,550	+		MPMX19_02071	0.71	-1.5
2,167,550	+		MPMX19_02071	0.71	-1.5
2,167,550	+		MPMX19_02071	0.71	+0.3
2,167,550	+		MPMX19_02071	0.71	-1.6
2,167,550	+		MPMX19_02071	0.71	-0.4
2,167,550	+		MPMX19_02071	0.71	-1.2
2,167,551	-		MPMX19_02071	0.71	+0.5
2,167,551	-		MPMX19_02071	0.71	-1.0
2,167,551	-		MPMX19_02071	0.71	+0.3
2,167,551	-		MPMX19_02071	0.71	-0.9
2,167,551	-		MPMX19_02071	0.71	+0.9
2,167,551	-		MPMX19_02071	0.71	-0.8
2,167,551	-		MPMX19_02071	0.71	-0.9
2,167,551	-		MPMX19_02071	0.71	+0.4
2,167,551	-		MPMX19_02071	0.71	-0.6
2,167,551	-		MPMX19_02071	0.71	-1.4
2,167,551	-		MPMX19_02071	0.71	-1.9
2,167,571	+		MPMX19_02071	0.73	-1.4
2,167,571	+		MPMX19_02071	0.73	-1.8
2,167,572	-		MPMX19_02071	0.73	-0.9
2,167,572	-		MPMX19_02071	0.73	+0.1
2,167,572	-		MPMX19_02071	0.73	+0.1
2,167,572	-		MPMX19_02071	0.73	+0.4
2,167,572	-		MPMX19_02071	0.73	-1.3
2,167,572	-		MPMX19_02071	0.73	+0.5
2,167,586	+		MPMX19_02071	0.75	-0.3
2,167,586	+		MPMX19_02071	0.75	+0.6
2,167,586	+		MPMX19_02071	0.75	-1.5
2,167,586	+		MPMX19_02071	0.75	-0.0
2,167,587	-		MPMX19_02071	0.75	-0.1
2,167,793	+				+0.1
2,167,793	+				-0.8
2,167,793	+				-0.0
2,167,793	+				-0.8
2,167,793	+				+0.2
2,167,793	+				-1.1
2,167,793	+				+0.5
2,167,793	+				+0.3
2,167,793	+				-1.9
2,167,793	+				+0.3
2,167,793	+				-0.6
2,167,793	+				+0.4
2,167,793	+				-0.3
2,167,793	+				-0.4
2,167,793	+				-1.5
2,167,793	+				-2.5
2,167,793	+				-0.9
2,167,794	-				-1.5
2,167,794	-				-1.0
2,167,794	-				-0.5
2,167,794	-				+1.1
2,167,794	-				+0.7
2,167,794	-				+0.4
2,167,794	-				+0.9
2,167,794	-				-0.6
2,167,794	-				-0.6
2,167,794	-				-0.1
2,167,794	-				-0.6
2,167,794	-				-1.3
2,167,794	-				+1.4
2,167,794	-				+0.3
2,167,794	-				-0.6
2,167,794	-				+0.3
2,167,794	-				-1.3
2,167,794	-				-0.3
2,167,794	-				+1.1
2,167,794	-				-0.9
2,167,794	-				-1.3
2,167,794	-				+1.7
2,167,794	-				+0.4
2,169,090	+		MPMX19_02072	0.59	-0.6
2,169,090	+		MPMX19_02072	0.59	-2.1
2,169,090	+		MPMX19_02072	0.59	-2.0
2,169,090	+		MPMX19_02072	0.59	-1.3
2,169,090	+		MPMX19_02072	0.59	+0.3
2,169,090	+		MPMX19_02072	0.59	-0.0
2,169,090	+		MPMX19_02072	0.59	+1.9
2,169,090	+		MPMX19_02072	0.59	-2.4
2,169,091	-		MPMX19_02072	0.59	+0.3
2,169,091	-		MPMX19_02072	0.59	+0.5
2,169,216	+		MPMX19_02072	0.65	-1.0
2,169,216	+		MPMX19_02072	0.65	+1.1
2,169,216	+		MPMX19_02072	0.65	+0.1
2,169,216	+		MPMX19_02072	0.65	-0.3
2,169,216	+		MPMX19_02072	0.65	+0.3
2,169,216	+		MPMX19_02072	0.65	-0.7
2,169,216	+		MPMX19_02072	0.65	+0.3
2,169,216	+		MPMX19_02072	0.65	-0.5
2,169,216	+		MPMX19_02072	0.65	-0.9
2,169,216	+		MPMX19_02072	0.65	-0.2
2,169,216	+		MPMX19_02072	0.65	+1.2
2,169,216	+		MPMX19_02072	0.65	-0.1
2,169,216	+		MPMX19_02072	0.65	+0.7
2,169,216	+		MPMX19_02072	0.65	-0.5
2,169,216	+		MPMX19_02072	0.65	-0.9
2,169,216	+		MPMX19_02072	0.65	-1.8
2,169,216	+		MPMX19_02072	0.65	+0.8
2,169,217	-		MPMX19_02072	0.65	+0.5
2,169,217	-		MPMX19_02072	0.65	-0.2
2,169,217	-		MPMX19_02072	0.65	+0.5
2,169,217	-		MPMX19_02072	0.65	-0.8
2,169,217	-		MPMX19_02072	0.65	-1.8
2,169,217	-		MPMX19_02072	0.65	-3.0
2,169,217	-		MPMX19_02072	0.65	-0.9
2,169,217	-		MPMX19_02072	0.65	-1.0
2,169,217	-		MPMX19_02072	0.65	-1.3
2,169,217	-		MPMX19_02072	0.65	+0.3
2,169,217	-		MPMX19_02072	0.65	-0.9
2,169,217	-		MPMX19_02072	0.65	-1.4
2,169,217	-		MPMX19_02072	0.65	+1.0
2,169,258	+		MPMX19_02072	0.67	+0.9
2,169,259	-		MPMX19_02072	0.67	-0.0
2,169,259	-		MPMX19_02072	0.67	-0.3
2,169,304	+		MPMX19_02072	0.69	+0.1
2,169,304	+		MPMX19_02072	0.69	-1.1
2,169,305	-		MPMX19_02072	0.69	+1.4
2,169,405	+		MPMX19_02072	0.74	-1.9
2,169,405	+		MPMX19_02072	0.74	-1.3
2,169,405	+		MPMX19_02072	0.74	-0.1
2,169,405	+		MPMX19_02072	0.74	+0.7
2,169,406	-		MPMX19_02072	0.74	+0.3
2,169,406	-		MPMX19_02072	0.74	-0.8
2,169,448	+		MPMX19_02072	0.76	-1.5
2,169,448	+		MPMX19_02072	0.76	-0.8
2,169,448	+		MPMX19_02072	0.76	+0.1
2,169,448	+		MPMX19_02072	0.76	-1.3
2,169,448	+		MPMX19_02072	0.76	-0.1
2,169,448	+		MPMX19_02072	0.76	-0.2
2,169,448	+		MPMX19_02072	0.76	-0.5
2,169,449	-		MPMX19_02072	0.76	-1.6
2,169,449	-		MPMX19_02072	0.76	-1.6
2,169,449	-		MPMX19_02072	0.76	+0.1
2,169,449	-		MPMX19_02072	0.76	-0.6
2,169,449	-		MPMX19_02072	0.76	-0.8
2,169,449	-		MPMX19_02072	0.76	+1.5
2,169,449	-		MPMX19_02072	0.76	-2.0
2,169,449	-		MPMX19_02072	0.76	-0.5
2,169,450	+		MPMX19_02072	0.76	-2.6
2,169,450	+		MPMX19_02072	0.76	-1.3
2,169,450	+		MPMX19_02072	0.76	-1.4
2,169,450	+		MPMX19_02072	0.76	-2.0
2,169,450	+		MPMX19_02072	0.76	-1.1
2,169,450	+		MPMX19_02072	0.76	-0.4
2,169,450	+		MPMX19_02072	0.76	-0.9
2,169,450	+		MPMX19_02072	0.76	-0.6
2,169,450	+		MPMX19_02072	0.76	+0.6
2,169,451	-		MPMX19_02072	0.76	-0.3
2,169,451	-		MPMX19_02072	0.76	-0.1
2,169,451	-		MPMX19_02072	0.76	+1.4
2,169,451	-		MPMX19_02072	0.76	-1.5
2,169,451	-		MPMX19_02072	0.76	-1.0
2,169,451	-		MPMX19_02072	0.76	+0.7
2,169,453	+		MPMX19_02072	0.76	-0.3
2,169,453	+		MPMX19_02072	0.76	+0.3
2,169,453	+		MPMX19_02072	0.76	+0.4
2,169,453	+		MPMX19_02072	0.76	+0.8
2,169,453	+		MPMX19_02072	0.76	+0.2
2,169,453	+		MPMX19_02072	0.76	-1.9
2,169,453	+		MPMX19_02072	0.76	+0.9
2,169,454	-		MPMX19_02072	0.76	+0.4
2,169,454	-		MPMX19_02072	0.76	-0.0
2,169,454	-		MPMX19_02072	0.76	-2.0
2,169,454	-		MPMX19_02072	0.76	-0.8
2,169,454	-		MPMX19_02072	0.76	-0.4
2,169,454	-		MPMX19_02072	0.76	-0.3
2,169,467	+		MPMX19_02072	0.77	-0.5
2,169,467	+		MPMX19_02072	0.77	-2.6
2,169,467	+		MPMX19_02072	0.77	-0.8
2,169,467	+		MPMX19_02072	0.77	-0.4
2,169,467	+		MPMX19_02072	0.77	-0.5
2,169,467	+		MPMX19_02072	0.77	+0.3
2,169,468	-		MPMX19_02072	0.77	-1.0
2,169,468	-		MPMX19_02072	0.77	+0.3
2,169,468	-		MPMX19_02072	0.77	-0.5
2,169,468	-		MPMX19_02072	0.77	-2.0
2,169,468	-		MPMX19_02072	0.77	-2.3
2,169,468	-		MPMX19_02072	0.77	-1.2
2,169,468	-		MPMX19_02072	0.77	+0.1
2,169,468	-		MPMX19_02072	0.77	-1.5
2,169,468	-		MPMX19_02072	0.77	+0.9
2,169,468	-		MPMX19_02072	0.77	+0.2
2,169,468	-		MPMX19_02072	0.77	-1.9
2,169,468	-		MPMX19_02072	0.77	-0.3
2,169,468	-		MPMX19_02072	0.77	+0.8
2,169,483	+		MPMX19_02072	0.77	-2.8
2,169,483	+		MPMX19_02072	0.77	-1.1
2,169,483	+		MPMX19_02072	0.77	-0.2
2,169,484	-		MPMX19_02072	0.78	-1.5
2,169,484	-		MPMX19_02072	0.78	-0.5
2,169,484	-		MPMX19_02072	0.78	+1.0
2,169,651	+		MPMX19_02072	0.86	-0.9
2,169,651	+		MPMX19_02072	0.86	-0.8
2,169,651	+		MPMX19_02072	0.86	-0.8
2,169,651	+		MPMX19_02072	0.86	-1.3
2,169,651	+		MPMX19_02072	0.86	+0.7
2,169,651	+		MPMX19_02072	0.86	-0.6
2,169,651	+		MPMX19_02072	0.86	-0.3
2,169,652	-		MPMX19_02072	0.86	-2.1
2,169,652	-		MPMX19_02072	0.86	-2.0
2,169,652	-		MPMX19_02072	0.86	-0.9
2,169,652	-		MPMX19_02072	0.86	+0.5
2,169,684	+		MPMX19_02072	0.87	+0.2
2,169,684	+		MPMX19_02072	0.87	-0.4
2,169,981	+				-0.9
2,169,981	+				-1.5
2,169,981	+				+0.5
2,170,028	-				-0.6
2,170,028	-				-0.9
2,170,049	+				-1.0
2,170,049	+				+0.6
2,170,049	+				-1.6
2,170,050	-				+0.7
2,170,050	-				-1.0
2,170,050	-				-1.6
2,170,050	-				-0.1
2,170,050	-				-1.1
2,170,050	-				-1.8
2,170,051	+				-0.6
2,170,051	+				-1.3
2,170,052	-				-1.1
2,170,052	-				-0.9
2,170,268	+				-0.3
2,170,268	+				+0.4
2,170,268	+				+0.2
2,170,268	+				+0.4
2,170,268	+				-1.1
2,170,269	-				-0.2
2,170,269	-				-0.6
2,170,269	-				-0.8
2,170,269	-				+0.6
2,170,269	-				+0.6
2,170,280	+				-0.3
2,170,281	-				-2.9
2,170,433	+		MPMX19_02073	0.16	+0.3
2,170,434	-		MPMX19_02073	0.16	-1.1
2,170,434	-		MPMX19_02073	0.16	-0.6
2,170,946	+		MPMX19_02073	0.67	-0.8
2,170,946	+		MPMX19_02073	0.67	+0.1
2,170,946	+		MPMX19_02073	0.67	+1.3
2,170,946	+		MPMX19_02073	0.67	+0.1
2,170,946	+		MPMX19_02073	0.67	-1.6
2,170,946	+		MPMX19_02073	0.67	-0.1
2,170,946	+		MPMX19_02073	0.67	-1.9
2,170,946	+		MPMX19_02073	0.67	-1.1
2,170,946	+		MPMX19_02073	0.67	+0.4
2,170,946	+		MPMX19_02073	0.67	+0.1
2,170,946	+		MPMX19_02073	0.67	-1.0
2,170,946	+		MPMX19_02073	0.67	-0.0
2,170,946	+		MPMX19_02073	0.67	-0.3
2,170,946	+		MPMX19_02073	0.67	+0.2
2,170,946	+		MPMX19_02073	0.67	-0.9
2,170,946	+		MPMX19_02073	0.67	+1.0
2,170,946	+		MPMX19_02073	0.67	-1.5
2,170,946	+		MPMX19_02073	0.67	-0.9
2,170,946	+		MPMX19_02073	0.67	-1.1
2,170,947	-		MPMX19_02073	0.67	+0.1
2,170,947	-		MPMX19_02073	0.67	-0.9
2,170,947	-		MPMX19_02073	0.67	-0.8
2,170,947	-		MPMX19_02073	0.67	-0.4
2,170,947	-		MPMX19_02073	0.67	-1.1
2,170,947	-		MPMX19_02073	0.67	+0.1
2,170,947	-		MPMX19_02073	0.67	-0.6
2,170,947	-		MPMX19_02073	0.67	-0.8
2,170,947	-		MPMX19_02073	0.67	-0.1
2,170,947	-		MPMX19_02073	0.67	-0.7
2,170,947	-		MPMX19_02073	0.67	+0.7
2,170,947	-		MPMX19_02073	0.67	-1.5
2,170,947	-		MPMX19_02073	0.67	-0.4
2,170,947	-		MPMX19_02073	0.67	+0.8
2,170,947	-		MPMX19_02073	0.67	-0.1
2,170,947	-		MPMX19_02073	0.67	+0.2
2,170,947	-		MPMX19_02073	0.67	+0.2
2,170,947	-		MPMX19_02073	0.67	+1.1
2,170,947	-		MPMX19_02073	0.67	+1.4
2,170,947	-		MPMX19_02073	0.67	-0.9
2,170,947	-		MPMX19_02073	0.67	+0.5
2,170,947	-		MPMX19_02073	0.67	-1.0