Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02067

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,161,346	+		MPMX19_02066	0.27	-0.3
2,161,346	+		MPMX19_02066	0.27	-0.5
2,161,347	-		MPMX19_02066	0.27	+0.1
2,161,347	-		MPMX19_02066	0.27	-1.1
2,161,347	-		MPMX19_02066	0.27	-0.3
2,161,347	-		MPMX19_02066	0.27	-1.3
2,161,347	-		MPMX19_02066	0.27	-0.8
2,161,898	+		MPMX19_02066	0.90	-0.1
2,161,898	+		MPMX19_02066	0.90	-0.2
2,161,898	+		MPMX19_02066	0.90	-0.5
2,161,898	+		MPMX19_02066	0.90	-1.1
2,161,898	+		MPMX19_02066	0.90	+0.5
2,161,899	-				-0.0
2,161,899	-				-1.4
2,161,899	-				+0.4
2,161,899	-				-0.3
2,161,899	-				-0.8
2,161,899	-				-1.0
2,161,899	-				+0.3
2,161,899	-				+0.2
2,161,899	-				-1.2
2,161,899	-				+0.7
2,161,899	-				+1.0
2,161,899	-				-1.7
2,161,899	-				-0.6
2,161,931	+				+1.1
2,161,931	+				-0.8
2,161,931	+				+0.7
2,161,931	+				-0.9
2,161,931	+				-1.5
2,161,931	+				-0.6
2,161,931	+				-1.0
2,161,932	-				+1.4
2,161,932	-				-0.4
2,161,932	-				-1.0
2,161,932	-				-1.2
2,161,932	-				-0.9
2,161,932	-				+0.4
2,161,932	-				+0.5
2,161,932	-				-0.5
2,161,932	-				-0.1
2,161,964	+				-0.6
2,161,964	+				+0.7
2,161,965	-				-0.2
2,161,965	-				+0.4
2,161,965	-				+0.5
2,161,965	-				-2.3
2,161,965	-				-1.5
2,161,965	-				-1.3
2,161,965	-				-1.0
2,162,087	+				+1.2
2,162,087	+				-0.3
2,162,087	+				-0.2
2,162,087	+				+0.6
2,162,087	+				+0.2
2,162,087	+				-0.3
2,162,088	-				-1.9
2,162,088	-				-1.6
2,162,088	-				+1.1
2,162,088	-				+0.3
2,162,088	-				-1.3
2,162,088	-				+1.1
2,162,135	+				-1.4
2,162,136	-				+0.0
2,162,350	+				-1.0
2,162,350	+				+0.7
2,162,350	+				+0.8
2,162,350	+				+0.2
2,162,350	+				-1.2
2,162,350	+				+0.2
2,162,350	+				+0.1
2,162,350	+				-0.1
2,162,350	+				+1.0
2,162,350	+				-1.0
2,162,350	+				-1.5
2,162,350	+				+3.5
2,162,350	+				+2.5
2,162,350	+				-1.0
2,162,350	+				-2.8
2,162,350	+				-1.1
2,162,350	+				+0.4
2,162,351	-				+0.5
2,162,351	-				-0.3
2,162,351	-				+0.3
2,162,351	-				-1.6
2,162,351	-				-2.2
2,162,351	-				-0.3
2,162,351	-				-0.5
2,162,351	-				+1.2
2,162,351	-				-1.5
2,162,351	-				-1.0
2,162,351	-				+0.7
2,162,351	-				+0.4
2,162,351	-				-0.3
2,162,351	-				+0.1
2,162,351	-				-0.3
2,162,351	-				-0.6
2,162,351	-				-0.7
2,162,351	-				-2.6
2,162,351	-				-0.8
2,162,351	-				-0.0
2,162,443	+		MPMX19_02067	0.18	-1.6
2,162,443	+		MPMX19_02067	0.18	+1.2
2,162,443	+		MPMX19_02067	0.18	-3.6
2,162,443	+		MPMX19_02067	0.18	-0.7
2,162,443	+		MPMX19_02067	0.18	-1.1
2,162,443	+		MPMX19_02067	0.18	-0.5
2,162,443	+		MPMX19_02067	0.18	+0.1
2,162,443	+		MPMX19_02067	0.18	-0.5
2,162,443	+		MPMX19_02067	0.18	+0.3
2,162,443	+		MPMX19_02067	0.18	+0.1
2,162,443	+		MPMX19_02067	0.18	+0.5
2,162,444	-		MPMX19_02067	0.18	-0.0
2,162,444	-		MPMX19_02067	0.18	-1.8
2,162,444	-		MPMX19_02067	0.18	-1.3
2,162,444	-		MPMX19_02067	0.18	+0.4
2,162,444	-		MPMX19_02067	0.18	-0.6
2,162,444	-		MPMX19_02067	0.18	-1.8
2,162,444	-		MPMX19_02067	0.18	-0.1
2,162,444	-		MPMX19_02067	0.18	-1.5
2,162,491	+		MPMX19_02067	0.22	+0.2
2,162,491	+		MPMX19_02067	0.22	+1.0
2,162,491	+		MPMX19_02067	0.22	+0.0
2,162,491	+		MPMX19_02067	0.22	-0.6
2,162,491	+		MPMX19_02067	0.22	+1.4
2,162,491	+		MPMX19_02067	0.22	-0.3
2,162,492	-		MPMX19_02067	0.22	-0.3
2,162,492	-		MPMX19_02067	0.22	-0.4
2,162,492	-		MPMX19_02067	0.22	-0.8
2,162,492	-		MPMX19_02067	0.22	-0.4
2,162,492	-		MPMX19_02067	0.22	-0.4
2,162,492	-		MPMX19_02067	0.22	+0.3
2,162,492	-		MPMX19_02067	0.22	+0.1
2,162,492	-		MPMX19_02067	0.22	-0.5
2,162,614	+		MPMX19_02067	0.32	+0.4
2,162,614	+		MPMX19_02067	0.32	-0.9
2,162,614	+		MPMX19_02067	0.32	-1.1
2,162,614	+		MPMX19_02067	0.32	+0.8
2,162,614	+		MPMX19_02067	0.32	-1.0
2,162,614	+		MPMX19_02067	0.32	-0.6
2,162,614	+		MPMX19_02067	0.32	+1.1
2,162,614	+		MPMX19_02067	0.32	+0.4
2,162,614	+		MPMX19_02067	0.32	-1.1
2,162,614	+		MPMX19_02067	0.32	-0.9
2,162,614	+		MPMX19_02067	0.32	+1.7
2,162,614	+		MPMX19_02067	0.32	-0.1
2,162,614	+		MPMX19_02067	0.32	+0.1
2,162,614	+		MPMX19_02067	0.32	-0.8
2,162,614	+		MPMX19_02067	0.32	-0.1
2,162,614	+		MPMX19_02067	0.32	-0.2
2,162,614	+		MPMX19_02067	0.32	+0.7
2,162,614	+		MPMX19_02067	0.32	-0.2
2,162,614	+		MPMX19_02067	0.32	-0.3
2,162,615	-		MPMX19_02067	0.32	+0.5
2,162,615	-		MPMX19_02067	0.32	+0.2
2,162,615	-		MPMX19_02067	0.32	+0.1
2,162,615	-		MPMX19_02067	0.32	-0.3
2,162,615	-		MPMX19_02067	0.32	+0.4
2,162,615	-		MPMX19_02067	0.32	-0.0
2,162,615	-		MPMX19_02067	0.32	+0.6
2,162,615	-		MPMX19_02067	0.32	-1.7
2,162,615	-		MPMX19_02067	0.32	-0.2
2,162,615	-		MPMX19_02067	0.32	+1.3
2,162,615	-		MPMX19_02067	0.32	-1.3
2,162,615	-		MPMX19_02067	0.32	+1.5
2,162,615	-		MPMX19_02067	0.32	-0.6
2,162,615	-		MPMX19_02067	0.32	-0.2
2,162,615	-		MPMX19_02067	0.32	-1.6
2,162,615	-		MPMX19_02067	0.32	-0.6
2,162,615	-		MPMX19_02067	0.32	+0.1
2,162,615	-		MPMX19_02067	0.32	-1.1
2,162,615	-		MPMX19_02067	0.32	-1.1
2,162,644	+		MPMX19_02067	0.35	-0.2
2,162,644	+		MPMX19_02067	0.35	-0.4
2,162,644	+		MPMX19_02067	0.35	+0.3
2,162,644	+		MPMX19_02067	0.35	-0.0
2,162,645	-		MPMX19_02067	0.35	-0.9
2,162,645	-		MPMX19_02067	0.35	-1.2
2,162,645	-		MPMX19_02067	0.35	-2.0
2,162,645	-		MPMX19_02067	0.35	-0.0
2,162,674	+		MPMX19_02067	0.37	-0.6
2,162,674	+		MPMX19_02067	0.37	-1.0
2,162,674	+		MPMX19_02067	0.37	-0.1
2,162,674	+		MPMX19_02067	0.37	-0.9
2,162,675	-		MPMX19_02067	0.37	+0.4
2,162,675	-		MPMX19_02067	0.37	+1.7
2,162,675	-		MPMX19_02067	0.37	-0.5
2,162,791	+		MPMX19_02067	0.47	+0.0
2,162,791	+		MPMX19_02067	0.47	-0.3
2,162,791	+		MPMX19_02067	0.47	-2.0
2,162,791	+		MPMX19_02067	0.47	-1.8
2,162,791	+		MPMX19_02067	0.47	-0.0
2,162,791	+		MPMX19_02067	0.47	+0.7
2,162,791	+		MPMX19_02067	0.47	+1.1
2,162,791	+		MPMX19_02067	0.47	-0.2
2,162,791	+		MPMX19_02067	0.47	+0.4
2,162,791	+		MPMX19_02067	0.47	-0.4
2,162,791	+		MPMX19_02067	0.47	-1.4
2,162,792	-		MPMX19_02067	0.47	-1.5
2,162,792	-		MPMX19_02067	0.47	-0.0
2,162,792	-		MPMX19_02067	0.47	-0.5
2,162,792	-		MPMX19_02067	0.47	+0.6
2,162,792	-		MPMX19_02067	0.47	+0.4
2,162,792	-		MPMX19_02067	0.47	-0.6
2,162,792	-		MPMX19_02067	0.47	+0.6
2,162,792	-		MPMX19_02067	0.47	-0.2
2,163,166	+		MPMX19_02067	0.80	-0.9
2,163,166	+		MPMX19_02067	0.80	-2.5
2,163,166	+		MPMX19_02067	0.80	-1.5
2,163,166	+		MPMX19_02067	0.80	+0.2
2,163,166	+		MPMX19_02067	0.80	+0.7
2,163,167	-		MPMX19_02067	0.80	+0.5
2,163,167	-		MPMX19_02067	0.80	-0.4
2,163,226	+		MPMX19_02067	0.85	+1.4
2,163,226	+		MPMX19_02067	0.85	+1.6
2,163,226	+		MPMX19_02067	0.85	+0.3
2,163,226	+		MPMX19_02067	0.85	-1.6
2,163,226	+		MPMX19_02067	0.85	-0.6
2,163,226	+		MPMX19_02067	0.85	+0.7
2,163,226	+		MPMX19_02067	0.85	-0.8
2,163,226	+		MPMX19_02067	0.85	-1.1
2,163,226	+		MPMX19_02067	0.85	-0.8
2,163,226	+		MPMX19_02067	0.85	+0.1
2,163,226	+		MPMX19_02067	0.85	-0.0
2,163,227	-		MPMX19_02067	0.85	-0.6
2,163,227	-		MPMX19_02067	0.85	-0.4
2,163,227	-		MPMX19_02067	0.85	-0.7
2,163,227	-		MPMX19_02067	0.85	+0.4
2,163,227	-		MPMX19_02067	0.85	-0.1
2,163,227	-		MPMX19_02067	0.85	+1.7
2,163,227	-		MPMX19_02067	0.85	+1.6
2,163,227	-		MPMX19_02067	0.85	-0.6
2,163,653	+				+0.8
2,163,653	+				-0.2
2,163,774	+				-0.4
2,163,775	-				+0.2
2,163,775	-				+0.7
2,163,776	+				-0.2
2,163,776	+				+0.1
2,163,776	+				+0.4
2,163,776	+				-0.1
2,163,776	+				+0.7
2,163,776	+				-0.8
2,163,777	-				+0.2
2,163,777	-				+0.3
2,163,777	-				-1.3
2,163,777	-				+1.7
2,163,777	-				-1.9
2,163,777	-				+0.1
2,163,777	-				-1.3
2,163,777	-				+0.2
2,163,777	-				-0.5
2,163,777	-				+0.2
2,163,932	+				+1.4
2,163,932	+				-1.9
2,163,932	+				-1.6
2,163,933	-				-1.6
2,163,933	-				+0.0
2,163,933	-				-0.6
2,164,094	+		MPMX19_02068	0.26	-1.9
2,164,094	+		MPMX19_02068	0.26	+0.1
2,164,095	-		MPMX19_02068	0.26	-1.6
2,164,095	-		MPMX19_02068	0.26	+0.1
2,164,095	-		MPMX19_02068	0.26	-2.1
2,164,095	-		MPMX19_02068	0.26	+0.3
2,164,095	-		MPMX19_02068	0.26	+1.2
2,164,148	+		MPMX19_02068	0.32	-1.7
2,164,148	+		MPMX19_02068	0.32	-0.6
2,164,148	+		MPMX19_02068	0.32	+0.4
2,164,148	+		MPMX19_02068	0.32	-0.3
2,164,148	+		MPMX19_02068	0.32	+0.2
2,164,148	+		MPMX19_02068	0.32	-1.3
2,164,148	+		MPMX19_02068	0.32	-0.1
2,164,148	+		MPMX19_02068	0.32	-2.1
2,164,148	+		MPMX19_02068	0.32	-0.9
2,164,148	+		MPMX19_02068	0.32	+0.8
2,164,148	+		MPMX19_02068	0.32	+0.7
2,164,148	+		MPMX19_02068	0.32	+0.4
2,164,148	+		MPMX19_02068	0.32	-2.0
2,164,148	+		MPMX19_02068	0.32	-0.0
2,164,149	-		MPMX19_02068	0.32	-0.2
2,164,149	-		MPMX19_02068	0.32	-1.4
2,164,149	-		MPMX19_02068	0.32	-0.9
2,164,149	-		MPMX19_02068	0.32	+0.1
2,164,149	-		MPMX19_02068	0.32	+0.4
2,164,149	-		MPMX19_02068	0.32	-1.3
2,164,149	-		MPMX19_02068	0.32	-0.6
2,164,149	-		MPMX19_02068	0.32	+1.7
2,164,149	-		MPMX19_02068	0.32	+0.6
2,164,149	-		MPMX19_02068	0.32	-1.0
2,164,286	+		MPMX19_02068	0.47	+0.9
2,164,286	+		MPMX19_02068	0.47	+0.8
2,164,286	+		MPMX19_02068	0.47	+2.0
2,164,286	+		MPMX19_02068	0.47	-2.2
2,164,286	+		MPMX19_02068	0.47	-0.9
2,164,287	-		MPMX19_02068	0.47	-0.8
2,164,287	-		MPMX19_02068	0.47	-2.5
2,164,287	-		MPMX19_02068	0.47	-0.8
2,164,287	-		MPMX19_02068	0.47	-0.4
2,164,287	-		MPMX19_02068	0.47	+0.2
2,164,287	-		MPMX19_02068	0.47	-0.9
2,164,287	-		MPMX19_02068	0.47	-0.1