Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02036

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,129,050	+		MPMX19_02035	0.20	-0.5
2,129,050	+		MPMX19_02035	0.20	+0.7
2,129,050	+		MPMX19_02035	0.20	+0.2
2,129,050	+		MPMX19_02035	0.20	-0.5
2,129,050	+		MPMX19_02035	0.20	-0.2
2,129,050	+		MPMX19_02035	0.20	+0.1
2,129,050	+		MPMX19_02035	0.20	-0.3
2,129,050	+		MPMX19_02035	0.20	+0.3
2,129,050	+		MPMX19_02035	0.20	-1.1
2,129,050	+		MPMX19_02035	0.20	-0.7
2,129,050	+		MPMX19_02035	0.20	+0.1
2,129,050	+		MPMX19_02035	0.20	-2.0
2,129,050	+		MPMX19_02035	0.20	+0.1
2,129,051	-		MPMX19_02035	0.20	-0.1
2,129,051	-		MPMX19_02035	0.20	+0.4
2,129,051	-		MPMX19_02035	0.20	-1.7
2,129,051	-		MPMX19_02035	0.20	-0.5
2,129,051	-		MPMX19_02035	0.20	+1.4
2,129,051	-		MPMX19_02035	0.20	-0.2
2,129,051	-		MPMX19_02035	0.20	-0.7
2,129,051	-		MPMX19_02035	0.20	+0.1
2,129,051	-		MPMX19_02035	0.20	-1.9
2,129,051	-		MPMX19_02035	0.20	-1.7
2,129,051	-		MPMX19_02035	0.20	-1.5
2,129,051	-		MPMX19_02035	0.20	+0.3
2,129,051	-		MPMX19_02035	0.20	-0.7
2,129,051	-		MPMX19_02035	0.20	-2.7
2,129,392	+		MPMX19_02035	0.53	+0.5
2,129,392	+		MPMX19_02035	0.53	-1.4
2,129,392	+		MPMX19_02035	0.53	-0.0
2,129,392	+		MPMX19_02035	0.53	-0.8
2,129,393	-		MPMX19_02035	0.53	-2.4
2,129,560	+		MPMX19_02035	0.69	+0.9
2,129,560	+		MPMX19_02035	0.69	+0.2
2,129,560	+		MPMX19_02035	0.69	-0.5
2,129,560	+		MPMX19_02035	0.69	+0.8
2,129,560	+		MPMX19_02035	0.69	-0.9
2,129,560	+		MPMX19_02035	0.69	-0.7
2,129,560	+		MPMX19_02035	0.69	+0.0
2,129,560	+		MPMX19_02035	0.69	+0.7
2,129,560	+		MPMX19_02035	0.69	-0.3
2,129,560	+		MPMX19_02035	0.69	-1.6
2,129,561	-		MPMX19_02035	0.69	-1.8
2,129,561	-		MPMX19_02035	0.69	+1.7
2,129,561	-		MPMX19_02035	0.69	+1.5
2,129,561	-		MPMX19_02035	0.69	+0.2
2,129,561	-		MPMX19_02035	0.69	-0.7
2,129,561	-		MPMX19_02035	0.69	-0.5
2,129,561	-		MPMX19_02035	0.69	+0.4
2,129,561	-		MPMX19_02035	0.69	-0.2
2,129,561	-		MPMX19_02035	0.69	+0.2
2,129,561	-		MPMX19_02035	0.69	-1.9
2,129,561	-		MPMX19_02035	0.69	-0.8
2,130,005	-				+0.5
2,130,005	-				-2.2
2,130,005	-				+0.5
2,130,005	-				-0.2
2,130,005	-				-2.7
2,130,045	+				-1.1
2,130,045	+				+1.7
2,130,045	+				+0.7
2,130,045	+				-0.5
2,130,045	+				-0.5
2,130,045	+				+0.7
2,130,045	+				+0.2
2,130,046	-				+1.7
2,130,046	-				+0.3
2,130,046	-				-1.3
2,130,046	-				-0.1
2,130,046	-				-1.3
2,130,046	-				+0.3
2,130,046	-				-0.4
2,130,712	-		MPMX19_02037	0.26	+1.7
2,130,712	-		MPMX19_02037	0.26	+0.2
2,130,712	-		MPMX19_02037	0.26	-1.1
2,130,712	-		MPMX19_02037	0.26	-0.3
2,130,712	-		MPMX19_02037	0.26	-0.7
2,130,720	+		MPMX19_02037	0.28	-0.8
2,130,720	+		MPMX19_02037	0.28	-0.5
2,130,720	+		MPMX19_02037	0.28	+0.2
2,130,720	+		MPMX19_02037	0.28	+0.7
2,130,720	+		MPMX19_02037	0.28	+0.1
2,130,721	-		MPMX19_02037	0.28	-0.5
2,130,721	-		MPMX19_02037	0.28	+0.9
2,130,721	-		MPMX19_02037	0.28	-0.9
2,130,721	-		MPMX19_02037	0.28	-0.6
2,130,721	-		MPMX19_02037	0.28	-0.7
2,130,721	-		MPMX19_02037	0.28	-0.5
2,130,721	-		MPMX19_02037	0.28	-0.3
2,130,721	-		MPMX19_02037	0.28	-1.1
2,130,864	+		MPMX19_02037	0.57	-1.7
2,130,864	+		MPMX19_02037	0.57	+0.7
2,130,864	+		MPMX19_02037	0.57	+0.2
2,130,864	+		MPMX19_02037	0.57	+1.8
2,130,864	+		MPMX19_02037	0.57	+0.3
2,130,864	+		MPMX19_02037	0.57	+0.8
2,130,864	+		MPMX19_02037	0.57	-0.6
2,130,864	+		MPMX19_02037	0.57	+0.1
2,130,864	+		MPMX19_02037	0.57	+0.5
2,130,865	-		MPMX19_02037	0.57	-0.9
2,130,865	-		MPMX19_02037	0.57	+0.3
2,130,865	-		MPMX19_02037	0.57	-0.7
2,130,865	-		MPMX19_02037	0.57	+0.2
2,130,865	-		MPMX19_02037	0.57	+1.1
2,130,865	-		MPMX19_02037	0.57	-0.5
2,130,865	-		MPMX19_02037	0.57	+0.3
2,130,865	-		MPMX19_02037	0.57	-0.1
2,130,865	-		MPMX19_02037	0.57	+0.6
2,130,865	-		MPMX19_02037	0.57	-1.0
2,130,865	-		MPMX19_02037	0.57	+0.9
2,130,865	-		MPMX19_02037	0.57	+0.3
2,130,906	+		MPMX19_02037	0.65	-0.3
2,130,906	+		MPMX19_02037	0.65	-0.4
2,130,906	+		MPMX19_02037	0.65	-0.5
2,130,906	+		MPMX19_02037	0.65	-2.0
2,130,906	+		MPMX19_02037	0.65	-0.9
2,130,906	+		MPMX19_02037	0.65	+2.7
2,130,906	+		MPMX19_02037	0.65	-2.1
2,130,906	+		MPMX19_02037	0.65	-1.2
2,130,906	+		MPMX19_02037	0.65	+1.1
2,130,906	+		MPMX19_02037	0.65	+0.6
2,130,906	+		MPMX19_02037	0.65	-0.2
2,130,906	+		MPMX19_02037	0.65	-0.8
2,130,906	+		MPMX19_02037	0.65	-1.5
2,130,906	+		MPMX19_02037	0.65	-2.2
2,130,906	+		MPMX19_02037	0.65	+0.2
2,130,906	+		MPMX19_02037	0.65	-0.4
2,130,906	+		MPMX19_02037	0.65	-0.7
2,130,907	-		MPMX19_02037	0.66	+0.7
2,130,907	-		MPMX19_02037	0.66	+1.1
2,130,907	-		MPMX19_02037	0.66	-0.8
2,130,907	-		MPMX19_02037	0.66	+0.1
2,130,907	-		MPMX19_02037	0.66	+0.5
2,130,907	-		MPMX19_02037	0.66	-0.7
2,130,907	-		MPMX19_02037	0.66	-0.5
2,130,907	-		MPMX19_02037	0.66	-2.0
2,130,907	-		MPMX19_02037	0.66	-0.0
2,130,907	-		MPMX19_02037	0.66	-1.7
2,130,907	-		MPMX19_02037	0.66	-0.8
2,130,907	-		MPMX19_02037	0.66	+0.2
2,130,907	-		MPMX19_02037	0.66	+0.1
2,130,907	-		MPMX19_02037	0.66	+1.2
2,130,907	-		MPMX19_02037	0.66	+0.3
2,130,907	-		MPMX19_02037	0.66	-0.3
2,130,960	+		MPMX19_02037	0.76	+0.7
2,130,960	+		MPMX19_02037	0.76	+0.1
2,130,960	+		MPMX19_02037	0.76	-1.3
2,130,960	+		MPMX19_02037	0.76	+0.1
2,130,960	+		MPMX19_02037	0.76	-0.5
2,130,960	+		MPMX19_02037	0.76	-0.3
2,130,960	+		MPMX19_02037	0.76	-1.8
2,130,960	+		MPMX19_02037	0.76	-0.0
2,130,960	+		MPMX19_02037	0.76	-1.1
2,130,960	+		MPMX19_02037	0.76	-1.3
2,130,960	+		MPMX19_02037	0.76	-1.1
2,130,960	+		MPMX19_02037	0.76	+0.7
2,130,960	+		MPMX19_02037	0.76	-2.1
2,130,960	+		MPMX19_02037	0.76	-1.0
2,130,960	+		MPMX19_02037	0.76	-2.1
2,130,960	+		MPMX19_02037	0.76	-0.9
2,130,960	+		MPMX19_02037	0.76	-0.4
2,130,960	+		MPMX19_02037	0.76	+0.6
2,130,960	+		MPMX19_02037	0.76	+0.8
2,130,960	+		MPMX19_02037	0.76	+0.7
2,130,960	+		MPMX19_02037	0.76	+0.1
2,130,960	+		MPMX19_02037	0.76	-0.7
2,130,960	+		MPMX19_02037	0.76	-0.9
2,130,960	+		MPMX19_02037	0.76	-1.5
2,130,960	+		MPMX19_02037	0.76	-0.7
2,130,960	+		MPMX19_02037	0.76	-1.6
2,130,961	-		MPMX19_02037	0.77	-1.0
2,130,961	-		MPMX19_02037	0.77	+0.7
2,130,961	-		MPMX19_02037	0.77	+1.9
2,130,961	-		MPMX19_02037	0.77	-0.3
2,130,961	-		MPMX19_02037	0.77	-0.8
2,130,961	-		MPMX19_02037	0.77	+0.3
2,130,961	-		MPMX19_02037	0.77	-0.5
2,130,961	-		MPMX19_02037	0.77	-1.0
2,130,961	-		MPMX19_02037	0.77	+0.7
2,130,961	-		MPMX19_02037	0.77	-0.4
2,130,961	-		MPMX19_02037	0.77	-0.7
2,130,961	-		MPMX19_02037	0.77	+1.4
2,130,961	-		MPMX19_02037	0.77	+1.2
2,130,961	-		MPMX19_02037	0.77	-0.0
2,130,961	-		MPMX19_02037	0.77	-0.3
2,130,961	-		MPMX19_02037	0.77	-0.7
2,130,961	-		MPMX19_02037	0.77	-1.8
2,130,978	-		MPMX19_02037	0.80	-0.6
2,131,086	+				+0.8
2,131,086	+				+0.1
2,131,087	-				-1.8
2,131,087	-				+0.3
2,131,087	-				-0.5
2,131,087	-				-0.8
2,131,087	-				-1.0
2,131,087	-				-0.3
2,131,428	+		MPMX19_02038	0.14	-0.1
2,131,428	+		MPMX19_02038	0.14	-1.1
2,131,428	+		MPMX19_02038	0.14	-0.8
2,131,428	+		MPMX19_02038	0.14	-0.9
2,131,428	+		MPMX19_02038	0.14	-0.1
2,131,428	+		MPMX19_02038	0.14	+1.2
2,131,428	+		MPMX19_02038	0.14	-1.8
2,131,428	+		MPMX19_02038	0.14	-1.5
2,131,429	-		MPMX19_02038	0.14	-0.1
2,131,429	-		MPMX19_02038	0.14	-0.3
2,131,429	-		MPMX19_02038	0.14	-1.0
2,131,429	-		MPMX19_02038	0.14	+0.5
2,131,429	-		MPMX19_02038	0.14	-0.8
2,131,429	-		MPMX19_02038	0.14	-1.7
2,131,429	-		MPMX19_02038	0.14	-1.9
2,131,429	-		MPMX19_02038	0.14	-2.3
2,131,429	-		MPMX19_02038	0.14	-0.3
2,131,434	+		MPMX19_02038	0.14	-1.1
2,131,434	+		MPMX19_02038	0.14	+0.2
2,131,434	+		MPMX19_02038	0.14	+0.9
2,131,434	+		MPMX19_02038	0.14	-0.9
2,131,434	+		MPMX19_02038	0.14	+0.3
2,131,434	+		MPMX19_02038	0.14	+0.9
2,131,434	+		MPMX19_02038	0.14	+0.3
2,131,434	+		MPMX19_02038	0.14	+0.1
2,131,434	+		MPMX19_02038	0.14	-0.7
2,131,434	+		MPMX19_02038	0.14	+1.1
2,131,434	+		MPMX19_02038	0.14	+1.1
2,131,434	+		MPMX19_02038	0.14	-0.8
2,131,434	+		MPMX19_02038	0.14	-1.7
2,131,434	+		MPMX19_02038	0.14	+0.9
2,131,434	+		MPMX19_02038	0.14	+0.1
2,131,434	+		MPMX19_02038	0.14	-0.1
2,131,435	-		MPMX19_02038	0.14	+1.3
2,131,435	-		MPMX19_02038	0.14	-0.1
2,131,435	-		MPMX19_02038	0.14	+1.2
2,131,435	-		MPMX19_02038	0.14	+0.7
2,131,435	-		MPMX19_02038	0.14	-1.1
2,131,435	-		MPMX19_02038	0.14	-1.5
2,131,435	-		MPMX19_02038	0.14	-1.2
2,131,435	-		MPMX19_02038	0.14	-0.3
2,131,435	-		MPMX19_02038	0.14	-1.7
2,131,435	-		MPMX19_02038	0.14	-0.1
2,131,435	-		MPMX19_02038	0.14	-2.0
2,131,435	-		MPMX19_02038	0.14	-0.6
2,131,435	-		MPMX19_02038	0.14	+0.6
2,131,435	-		MPMX19_02038	0.14	-0.6
2,131,435	-		MPMX19_02038	0.14	+0.0
2,131,584	+		MPMX19_02038	0.22	-0.4
2,131,584	+		MPMX19_02038	0.22	-2.3
2,131,585	-		MPMX19_02038	0.22	+1.3
2,131,585	-		MPMX19_02038	0.22	-1.5
2,131,585	-		MPMX19_02038	0.22	-0.5
2,131,585	-		MPMX19_02038	0.22	-0.5
2,131,585	-		MPMX19_02038	0.22	-0.9