Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01952

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,033,998	+		MPMX19_01951	0.15	+2.0
2,033,998	+		MPMX19_01951	0.15	+0.4
2,033,998	+		MPMX19_01951	0.15	+0.0
2,033,998	+		MPMX19_01951	0.15	+0.5
2,033,999	-		MPMX19_01951	0.15	-0.2
2,033,999	-		MPMX19_01951	0.15	-0.9
2,034,046	+		MPMX19_01951	0.20	-2.2
2,034,046	+		MPMX19_01951	0.20	-1.1
2,034,046	+		MPMX19_01951	0.20	-1.0
2,034,046	+		MPMX19_01951	0.20	-0.4
2,034,046	+		MPMX19_01951	0.20	-1.0
2,034,046	+		MPMX19_01951	0.20	-1.5
2,034,046	+		MPMX19_01951	0.20	+0.2
2,034,046	+		MPMX19_01951	0.20	+0.3
2,034,046	+		MPMX19_01951	0.20	+1.6
2,034,046	+		MPMX19_01951	0.20	-2.7
2,034,046	+		MPMX19_01951	0.20	+0.6
2,034,046	+		MPMX19_01951	0.20	+0.5
2,034,046	+		MPMX19_01951	0.20	-0.0
2,034,046	+		MPMX19_01951	0.20	+0.0
2,034,046	+		MPMX19_01951	0.20	+0.0
2,034,046	+		MPMX19_01951	0.20	+0.1
2,034,046	+		MPMX19_01951	0.20	-2.2
2,034,046	+		MPMX19_01951	0.20	-2.1
2,034,046	+		MPMX19_01951	0.20	+0.6
2,034,046	+		MPMX19_01951	0.20	-2.6
2,034,046	+		MPMX19_01951	0.20	+0.2
2,034,046	+		MPMX19_01951	0.20	-1.2
2,034,047	-		MPMX19_01951	0.20	+0.6
2,034,047	-		MPMX19_01951	0.20	-0.1
2,034,047	-		MPMX19_01951	0.20	+0.3
2,034,047	-		MPMX19_01951	0.20	-0.3
2,034,047	-		MPMX19_01951	0.20	-0.2
2,034,047	-		MPMX19_01951	0.20	-1.3
2,034,047	-		MPMX19_01951	0.20	+0.8
2,034,047	-		MPMX19_01951	0.20	+0.4
2,034,047	-		MPMX19_01951	0.20	-0.1
2,034,047	-		MPMX19_01951	0.20	-0.1
2,034,047	-		MPMX19_01951	0.20	+0.2
2,034,047	-		MPMX19_01951	0.20	-0.4
2,034,047	-		MPMX19_01951	0.20	-0.5
2,034,047	-		MPMX19_01951	0.20	+0.8
2,034,047	-		MPMX19_01951	0.20	+0.3
2,034,047	-		MPMX19_01951	0.20	-0.1
2,034,047	-		MPMX19_01951	0.20	+0.3
2,034,047	-		MPMX19_01951	0.20	-0.5
2,034,100	+		MPMX19_01951	0.26	-0.6
2,034,100	+		MPMX19_01951	0.26	+0.5
2,034,100	+		MPMX19_01951	0.26	+0.6
2,034,100	+		MPMX19_01951	0.26	-0.6
2,034,101	-		MPMX19_01951	0.26	+0.6
2,034,101	-		MPMX19_01951	0.26	+1.1
2,034,101	-		MPMX19_01951	0.26	-0.1
2,034,101	-		MPMX19_01951	0.26	-0.4
2,034,101	-		MPMX19_01951	0.26	+0.5
2,034,101	-		MPMX19_01951	0.26	-2.1
2,034,184	+		MPMX19_01951	0.35	-0.4
2,034,184	+		MPMX19_01951	0.35	-1.4
2,034,185	-		MPMX19_01951	0.35	-0.7
2,034,313	+		MPMX19_01951	0.49	+0.0
2,034,313	+		MPMX19_01951	0.49	+0.9
2,034,313	+		MPMX19_01951	0.49	-0.7
2,034,313	+		MPMX19_01951	0.49	+0.6
2,034,313	+		MPMX19_01951	0.49	-1.2
2,034,313	+		MPMX19_01951	0.49	+0.3
2,034,313	+		MPMX19_01951	0.49	-0.6
2,034,313	+		MPMX19_01951	0.49	-0.2
2,034,313	+		MPMX19_01951	0.49	+0.5
2,034,313	+		MPMX19_01951	0.49	-1.1
2,034,313	+		MPMX19_01951	0.49	-0.5
2,034,314	-		MPMX19_01951	0.49	-1.5
2,034,314	-		MPMX19_01951	0.49	-0.2
2,034,314	-		MPMX19_01951	0.49	-1.9
2,034,314	-		MPMX19_01951	0.49	-0.6
2,034,314	-		MPMX19_01951	0.49	-0.4
2,034,314	-		MPMX19_01951	0.49	-0.5
2,034,314	-		MPMX19_01951	0.49	+0.0
2,034,314	-		MPMX19_01951	0.49	-0.8
2,034,314	-		MPMX19_01951	0.49	-1.7
2,034,314	-		MPMX19_01951	0.49	+0.3
2,034,314	-		MPMX19_01951	0.49	-1.4
2,034,430	+		MPMX19_01951	0.62	+1.0
2,034,430	+		MPMX19_01951	0.62	-2.0
2,034,430	+		MPMX19_01951	0.62	-0.0
2,034,430	+		MPMX19_01951	0.62	+0.6
2,034,430	+		MPMX19_01951	0.62	-0.7
2,034,430	+		MPMX19_01951	0.62	-1.2
2,034,430	+		MPMX19_01951	0.62	-1.0
2,034,430	+		MPMX19_01951	0.62	-0.0
2,034,430	+		MPMX19_01951	0.62	+0.7
2,034,430	+		MPMX19_01951	0.62	+0.1
2,034,431	-		MPMX19_01951	0.62	-0.6
2,034,431	-		MPMX19_01951	0.62	+1.6
2,034,431	-		MPMX19_01951	0.62	-1.8
2,034,431	-		MPMX19_01951	0.62	+1.6
2,034,431	-		MPMX19_01951	0.62	+0.8
2,034,431	-		MPMX19_01951	0.62	-0.4
2,034,431	-		MPMX19_01951	0.62	-0.4
2,034,628	+		MPMX19_01951	0.83	-0.1
2,034,629	-		MPMX19_01951	0.83	-0.7
2,034,629	-		MPMX19_01951	0.83	-1.6
2,034,629	-		MPMX19_01951	0.83	-1.4
2,034,629	-		MPMX19_01951	0.83	-0.1
2,034,659	+		MPMX19_01951	0.87	-2.1
2,034,660	-		MPMX19_01951	0.87	+0.7
2,034,694	+				-0.5
2,034,694	+				-1.5
2,034,695	-				+0.3
2,034,695	-				-0.7
2,034,695	-				+0.4
2,034,724	+				+0.0
2,034,724	+				+0.1
2,034,724	+				-0.8
2,034,724	+				-2.3
2,034,725	-				+0.0
2,034,725	-				+0.6
2,034,725	-				+1.2
2,034,725	-				+1.0
2,034,725	-				+0.6
2,034,766	+				+0.0
2,034,767	-				+0.4
2,034,767	-				-2.1
2,034,767	-				+0.3
2,034,856	+		MPMX19_01952	0.11	-0.3
2,034,856	+		MPMX19_01952	0.11	-1.5
2,034,857	-		MPMX19_01952	0.11	+2.0
2,034,857	-		MPMX19_01952	0.11	+1.8
2,034,857	-		MPMX19_01952	0.11	+0.4
2,035,180	+		MPMX19_01952	0.60	-1.8
2,035,180	+		MPMX19_01952	0.60	+0.0
2,035,180	+		MPMX19_01952	0.60	-0.3
2,035,180	+		MPMX19_01952	0.60	-0.7
2,035,181	-		MPMX19_01952	0.60	+1.0
2,035,181	-		MPMX19_01952	0.60	-0.7
2,035,181	-		MPMX19_01952	0.60	+0.1
2,035,181	-		MPMX19_01952	0.60	-1.4
2,035,181	-		MPMX19_01952	0.60	-2.5
2,035,181	-		MPMX19_01952	0.60	+0.2
2,035,219	+		MPMX19_01952	0.66	-1.6
2,035,219	+		MPMX19_01952	0.66	-0.3
2,035,219	+		MPMX19_01952	0.66	-1.6
2,035,219	+		MPMX19_01952	0.66	-0.5
2,035,219	+		MPMX19_01952	0.66	+0.2
2,035,219	+		MPMX19_01952	0.66	+0.0
2,035,219	+		MPMX19_01952	0.66	-1.8
2,035,219	+		MPMX19_01952	0.66	-1.4
2,035,220	-		MPMX19_01952	0.66	-0.1
2,035,220	-		MPMX19_01952	0.66	+0.1
2,035,220	-		MPMX19_01952	0.66	-0.6
2,035,220	-		MPMX19_01952	0.66	+0.4
2,035,220	-		MPMX19_01952	0.66	+0.0
2,035,220	-		MPMX19_01952	0.66	-1.5
2,035,220	-		MPMX19_01952	0.66	+0.5
2,035,220	-		MPMX19_01952	0.66	+1.2
2,035,220	-		MPMX19_01952	0.66	-0.4
2,035,220	-		MPMX19_01952	0.66	-1.2
2,035,220	-		MPMX19_01952	0.66	-0.2
2,035,220	-		MPMX19_01952	0.66	-0.3
2,035,220	-		MPMX19_01952	0.66	+0.6
2,035,220	-		MPMX19_01952	0.66	-0.9
2,035,288	+		MPMX19_01952	0.76	-0.5
2,035,288	+		MPMX19_01952	0.76	+0.6
2,035,288	+		MPMX19_01952	0.76	-0.4
2,035,288	+		MPMX19_01952	0.76	+0.1
2,035,288	+		MPMX19_01952	0.76	+0.3
2,035,288	+		MPMX19_01952	0.76	-1.2
2,035,288	+		MPMX19_01952	0.76	-1.8
2,035,288	+		MPMX19_01952	0.76	+0.0
2,035,288	+		MPMX19_01952	0.76	+0.2
2,035,288	+		MPMX19_01952	0.76	+0.1
2,035,288	+		MPMX19_01952	0.76	+0.1
2,035,288	+		MPMX19_01952	0.76	+0.5
2,035,288	+		MPMX19_01952	0.76	+1.0
2,035,288	+		MPMX19_01952	0.76	+0.5
2,035,288	+		MPMX19_01952	0.76	-0.5
2,035,288	+		MPMX19_01952	0.76	+1.6
2,035,288	+		MPMX19_01952	0.76	-0.8
2,035,288	+		MPMX19_01952	0.76	-1.1
2,035,288	+		MPMX19_01952	0.76	-2.0
2,035,288	+		MPMX19_01952	0.76	-0.8
2,035,288	+		MPMX19_01952	0.76	-0.8
2,035,288	+		MPMX19_01952	0.76	-1.2
2,035,288	+		MPMX19_01952	0.76	+1.5
2,035,288	+		MPMX19_01952	0.76	-0.5
2,035,288	+		MPMX19_01952	0.76	-1.5
2,035,288	+		MPMX19_01952	0.76	+1.0
2,035,288	+		MPMX19_01952	0.76	-1.1
2,035,289	-		MPMX19_01952	0.76	-1.1
2,035,289	-		MPMX19_01952	0.76	+0.6
2,035,289	-		MPMX19_01952	0.76	-0.7
2,035,289	-		MPMX19_01952	0.76	-0.5
2,035,289	-		MPMX19_01952	0.76	-0.1
2,035,289	-		MPMX19_01952	0.76	-0.7
2,035,289	-		MPMX19_01952	0.76	-1.5
2,035,289	-		MPMX19_01952	0.76	+0.0
2,035,289	-		MPMX19_01952	0.76	+0.6
2,035,289	-		MPMX19_01952	0.76	-0.6
2,035,289	-		MPMX19_01952	0.76	+0.4
2,035,289	-		MPMX19_01952	0.76	+0.6
2,035,289	-		MPMX19_01952	0.76	-0.2
2,035,289	-		MPMX19_01952	0.76	+0.6
2,035,289	-		MPMX19_01952	0.76	-1.5
2,035,289	-		MPMX19_01952	0.76	-0.5
2,035,289	-		MPMX19_01952	0.76	+0.6
2,035,289	-		MPMX19_01952	0.76	-0.7
2,035,289	-		MPMX19_01952	0.76	-0.6
2,035,289	-		MPMX19_01952	0.76	-1.4
2,035,289	-		MPMX19_01952	0.76	+1.9
2,035,289	-		MPMX19_01952	0.76	-2.4
2,035,289	-		MPMX19_01952	0.76	-1.3
2,035,289	-		MPMX19_01952	0.76	-0.3
2,036,025	+		MPMX19_01953	0.54	-0.8
2,036,025	+		MPMX19_01953	0.54	-0.0
2,036,025	+		MPMX19_01953	0.54	-0.7
2,036,025	+		MPMX19_01953	0.54	-0.7
2,036,025	+		MPMX19_01953	0.54	-0.4
2,036,025	+		MPMX19_01953	0.54	-0.4
2,036,025	+		MPMX19_01953	0.54	+1.1
2,036,025	+		MPMX19_01953	0.54	-1.5
2,036,025	+		MPMX19_01953	0.54	-1.1
2,036,025	+		MPMX19_01953	0.54	-0.1
2,036,025	+		MPMX19_01953	0.54	-2.2
2,036,025	+		MPMX19_01953	0.54	+0.8
2,036,025	+		MPMX19_01953	0.54	-0.3
2,036,025	+		MPMX19_01953	0.54	-0.6
2,036,026	-		MPMX19_01953	0.54	-0.7
2,036,026	-		MPMX19_01953	0.54	+0.8
2,036,026	-		MPMX19_01953	0.54	-0.5
2,036,026	-		MPMX19_01953	0.54	-0.5
2,036,026	-		MPMX19_01953	0.54	-1.1
2,036,026	-		MPMX19_01953	0.54	+0.2
2,036,026	-		MPMX19_01953	0.54	+0.9
2,036,026	-		MPMX19_01953	0.54	+0.8
2,036,026	-		MPMX19_01953	0.54	+0.4
2,036,026	-		MPMX19_01953	0.54	-1.1
2,036,026	-		MPMX19_01953	0.54	-2.3
2,036,038	+		MPMX19_01953	0.55	-0.5
2,036,038	+		MPMX19_01953	0.55	+0.0
2,036,038	+		MPMX19_01953	0.55	-1.2
2,036,038	+		MPMX19_01953	0.55	+0.5
2,036,038	+		MPMX19_01953	0.55	-0.8
2,036,038	+		MPMX19_01953	0.55	-0.7
2,036,038	+		MPMX19_01953	0.55	-0.6
2,036,038	+		MPMX19_01953	0.55	+0.6
2,036,038	+		MPMX19_01953	0.55	-0.4
2,036,038	+		MPMX19_01953	0.55	-0.4
2,036,038	+		MPMX19_01953	0.55	-0.6
2,036,038	+		MPMX19_01953	0.55	-0.2
2,036,038	+		MPMX19_01953	0.55	+0.6
2,036,038	+		MPMX19_01953	0.55	-0.6
2,036,038	+		MPMX19_01953	0.55	+0.9
2,036,038	+		MPMX19_01953	0.55	-0.5
2,036,038	+		MPMX19_01953	0.55	-1.2
2,036,038	+		MPMX19_01953	0.55	+0.5
2,036,038	+		MPMX19_01953	0.55	-0.4
2,036,038	+		MPMX19_01953	0.55	+0.8
2,036,038	+		MPMX19_01953	0.55	-1.8
2,036,038	+		MPMX19_01953	0.55	-0.4
2,036,038	+		MPMX19_01953	0.55	-0.4
2,036,038	+		MPMX19_01953	0.55	-0.5
2,036,038	+		MPMX19_01953	0.55	+0.4
2,036,038	+		MPMX19_01953	0.55	-1.2
2,036,038	+		MPMX19_01953	0.55	+0.3
2,036,038	+		MPMX19_01953	0.55	-0.0
2,036,038	+		MPMX19_01953	0.55	-0.6
2,036,038	+		MPMX19_01953	0.55	-0.2
2,036,038	+		MPMX19_01953	0.55	-1.4
2,036,038	+		MPMX19_01953	0.55	-0.6
2,036,038	+		MPMX19_01953	0.55	-0.8
2,036,038	+		MPMX19_01953	0.55	+0.1
2,036,038	+		MPMX19_01953	0.55	+0.6
2,036,038	+		MPMX19_01953	0.55	-3.8
2,036,039	-		MPMX19_01953	0.55	+1.1
2,036,039	-		MPMX19_01953	0.55	-1.1
2,036,039	-		MPMX19_01953	0.55	+0.8
2,036,039	-		MPMX19_01953	0.55	+0.0
2,036,039	-		MPMX19_01953	0.55	+0.0
2,036,039	-		MPMX19_01953	0.55	-2.6
2,036,039	-		MPMX19_01953	0.55	+0.3
2,036,039	-		MPMX19_01953	0.55	-0.5
2,036,039	-		MPMX19_01953	0.55	+0.6
2,036,039	-		MPMX19_01953	0.55	-0.1
2,036,039	-		MPMX19_01953	0.55	+0.5
2,036,039	-		MPMX19_01953	0.55	+0.6
2,036,039	-		MPMX19_01953	0.55	+0.9
2,036,039	-		MPMX19_01953	0.55	+0.6
2,036,039	-		MPMX19_01953	0.55	-1.7
2,036,039	-		MPMX19_01953	0.55	-0.8
2,036,039	-		MPMX19_01953	0.55	+0.1
2,036,039	-		MPMX19_01953	0.55	-1.5
2,036,039	-		MPMX19_01953	0.55	+1.2
2,036,039	-		MPMX19_01953	0.55	-0.1
2,036,039	-		MPMX19_01953	0.55	-1.6
2,036,039	-		MPMX19_01953	0.55	-0.6
2,036,039	-		MPMX19_01953	0.55	+0.1
2,036,039	-		MPMX19_01953	0.55	-0.7
2,036,039	-		MPMX19_01953	0.55	+0.6
2,036,039	-		MPMX19_01953	0.55	+0.0
2,036,039	-		MPMX19_01953	0.55	+0.5
2,036,039	-		MPMX19_01953	0.55	+1.3
2,036,039	-		MPMX19_01953	0.55	+0.5
2,036,039	-		MPMX19_01953	0.55	-0.4
2,036,039	-		MPMX19_01953	0.55	-0.0
2,036,039	-		MPMX19_01953	0.55	-2.7
2,036,389	+		MPMX19_01953	0.88	-1.2
2,036,389	+		MPMX19_01953	0.88	+0.0
2,036,390	-		MPMX19_01953	0.88	-1.7
2,036,390	-		MPMX19_01953	0.88	-0.9