Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01822

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,902,862	+		MPMX19_01820	0.27	+0.5
1,902,862	+		MPMX19_01820	0.27	-1.3
1,902,862	+		MPMX19_01820	0.27	+0.2
1,902,862	+		MPMX19_01820	0.27	-0.0
1,902,862	+		MPMX19_01820	0.27	+0.6
1,902,862	+		MPMX19_01820	0.27	-0.9
1,902,862	+		MPMX19_01820	0.27	-0.7
1,902,862	+		MPMX19_01820	0.27	-0.8
1,902,862	+		MPMX19_01820	0.27	+0.7
1,902,862	+		MPMX19_01820	0.27	-0.4
1,902,863	-		MPMX19_01820	0.28	-2.8
1,902,863	-		MPMX19_01820	0.28	-0.5
1,902,863	-		MPMX19_01820	0.28	+0.6
1,902,863	-		MPMX19_01820	0.28	-0.9
1,902,863	-		MPMX19_01820	0.28	-2.3
1,902,863	-		MPMX19_01820	0.28	-1.0
1,902,863	-		MPMX19_01820	0.28	+1.2
1,902,863	-		MPMX19_01820	0.28	-0.3
1,902,863	-		MPMX19_01820	0.28	+0.0
1,902,863	-		MPMX19_01820	0.28	-2.8
1,902,863	-		MPMX19_01820	0.28	+1.6
1,902,863	-		MPMX19_01820	0.28	-0.4
1,902,863	-		MPMX19_01820	0.28	-1.0
1,902,863	-		MPMX19_01820	0.28	-2.0
1,902,863	-		MPMX19_01820	0.28	-1.0
1,902,863	-		MPMX19_01820	0.28	-1.4
1,902,931	+		MPMX19_01820	0.37	-0.7
1,902,931	+		MPMX19_01820	0.37	-0.4
1,902,931	+		MPMX19_01820	0.37	+0.4
1,902,931	+		MPMX19_01820	0.37	-0.2
1,902,931	+		MPMX19_01820	0.37	+0.1
1,902,931	+		MPMX19_01820	0.37	-1.8
1,902,931	+		MPMX19_01820	0.37	-1.5
1,902,931	+		MPMX19_01820	0.37	-1.4
1,902,931	+		MPMX19_01820	0.37	-0.5
1,902,931	+		MPMX19_01820	0.37	-0.2
1,902,932	-		MPMX19_01820	0.37	+0.2
1,902,932	-		MPMX19_01820	0.37	-1.3
1,902,932	-		MPMX19_01820	0.37	-0.3
1,902,932	-		MPMX19_01820	0.37	+0.4
1,902,932	-		MPMX19_01820	0.37	+1.6
1,902,932	-		MPMX19_01820	0.37	+0.0
1,902,932	-		MPMX19_01820	0.37	-1.8
1,902,932	-		MPMX19_01820	0.37	+0.8
1,902,932	-		MPMX19_01820	0.37	-0.7
1,902,932	-		MPMX19_01820	0.37	-0.5
1,902,932	-		MPMX19_01820	0.37	+0.0
1,902,932	-		MPMX19_01820	0.37	-0.0
1,903,366	+				+0.7
1,903,366	+				+0.6
1,903,366	+				-1.8
1,903,366	+				-1.6
1,903,366	+				-0.8
1,903,366	+				-0.3
1,903,366	+				-0.7
1,903,366	+				-1.6
1,903,366	+				-0.7
1,903,366	+				+1.0
1,903,366	+				-0.5
1,903,366	+				-1.3
1,903,366	+				-0.6
1,903,366	+				-2.4
1,903,366	+				-1.0
1,903,366	+				+0.4
1,903,367	-				+0.4
1,903,367	-				-1.0
1,903,367	-				+0.2
1,903,367	-				-0.2
1,903,367	-				-0.5
1,903,367	-				+0.6
1,903,367	-				-1.1
1,903,367	-				-2.8
1,903,367	-				-1.4
1,903,367	-				-1.7
1,903,367	-				-0.9
1,903,367	-				+0.6
1,903,367	-				+0.3
1,903,367	-				-0.2
1,903,552	+				-2.1
1,903,552	+				-1.1
1,903,552	+				+1.6
1,903,553	-				-1.4
1,903,553	-				-2.5
1,903,553	-				+0.4
1,903,553	-				+0.6
1,903,672	+				-0.1
1,903,672	+				-1.4
1,903,672	+				+0.0
1,903,672	+				+0.8
1,903,672	+				+0.4
1,903,672	+				-1.0
1,903,672	+				-0.5
1,903,672	+				-1.2
1,903,673	-				-1.1
1,903,673	-				-0.7
1,903,673	-				-1.0
1,903,673	-				-0.3
1,903,673	-				+1.0
1,903,865	+				-1.2
1,903,865	+				-0.6
1,903,865	+				+0.3
1,903,866	-				+1.6
1,903,866	-				+0.2
1,903,866	-				+1.0
1,903,866	-				-1.2
1,903,866	-				+0.0
1,903,866	-				-0.2
1,903,866	-				-1.2
1,903,866	-				-1.4
1,903,866	-				-0.7
1,904,222	+		MPMX19_01822	0.24	+0.6
1,904,222	+		MPMX19_01822	0.24	+0.0
1,904,222	+		MPMX19_01822	0.24	+0.0
1,904,222	+		MPMX19_01822	0.24	+0.0
1,904,222	+		MPMX19_01822	0.24	+1.0
1,904,222	+		MPMX19_01822	0.24	-1.8
1,904,222	+		MPMX19_01822	0.24	-0.1
1,904,222	+		MPMX19_01822	0.24	-0.7
1,904,223	-		MPMX19_01822	0.24	+0.6
1,904,223	-		MPMX19_01822	0.24	+1.6
1,904,223	-		MPMX19_01822	0.24	-1.4
1,904,223	-		MPMX19_01822	0.24	-1.5
1,904,223	-		MPMX19_01822	0.24	-1.0
1,904,223	-		MPMX19_01822	0.24	-0.2
1,904,223	-		MPMX19_01822	0.24	-1.4
1,904,223	-		MPMX19_01822	0.24	+0.3
1,904,223	-		MPMX19_01822	0.24	+0.0
1,904,223	-		MPMX19_01822	0.24	+1.0
1,904,223	-		MPMX19_01822	0.24	+0.6
1,904,223	-		MPMX19_01822	0.24	-2.0
1,904,360	+		MPMX19_01822	0.32	-0.4
1,904,360	+		MPMX19_01822	0.32	-1.8
1,904,361	-		MPMX19_01822	0.32	+1.6
1,904,361	-		MPMX19_01822	0.32	-1.2
1,904,361	-		MPMX19_01822	0.32	-1.2
1,904,361	-		MPMX19_01822	0.32	-0.5
1,904,813	+		MPMX19_01822	0.59	-0.4
1,904,814	-		MPMX19_01822	0.59	+0.7
1,904,814	-		MPMX19_01822	0.59	-1.2
1,904,814	-		MPMX19_01822	0.59	-0.2
1,904,922	-		MPMX19_01822	0.65	+1.0
1,904,922	-		MPMX19_01822	0.65	-1.2
1,904,922	-		MPMX19_01822	0.65	-0.4
1,904,922	-		MPMX19_01822	0.65	-1.5
1,904,957	+		MPMX19_01822	0.67	-0.7
1,904,957	+		MPMX19_01822	0.67	-1.2
1,904,957	+		MPMX19_01822	0.67	-1.7
1,904,957	+		MPMX19_01822	0.67	-0.4
1,904,957	+		MPMX19_01822	0.67	+1.3
1,904,957	+		MPMX19_01822	0.67	-2.3
1,904,957	+		MPMX19_01822	0.67	+0.9
1,904,958	-		MPMX19_01822	0.68	+1.6
1,904,958	-		MPMX19_01822	0.68	-1.5
1,904,958	-		MPMX19_01822	0.68	-1.2
1,904,958	-		MPMX19_01822	0.68	+1.6
1,904,958	-		MPMX19_01822	0.68	-1.2
1,905,008	+		MPMX19_01822	0.70	-1.2
1,905,008	+		MPMX19_01822	0.70	+0.6
1,905,008	+		MPMX19_01822	0.70	-1.7
1,905,008	+		MPMX19_01822	0.70	-2.0
1,905,008	+		MPMX19_01822	0.70	-1.0
1,905,008	+		MPMX19_01822	0.70	-0.7
1,905,008	+		MPMX19_01822	0.70	-1.0
1,905,008	+		MPMX19_01822	0.70	-0.4
1,905,008	+		MPMX19_01822	0.70	-2.4
1,905,009	-		MPMX19_01822	0.71	+0.6
1,905,009	-		MPMX19_01822	0.71	-0.7
1,905,009	-		MPMX19_01822	0.71	-1.0
1,905,009	-		MPMX19_01822	0.71	-1.4
1,905,009	-		MPMX19_01822	0.71	+0.6
1,905,009	-		MPMX19_01822	0.71	-1.4
1,905,009	-		MPMX19_01822	0.71	-1.4
1,905,009	-		MPMX19_01822	0.71	-0.2
1,905,009	-		MPMX19_01822	0.71	-1.0
1,905,009	-		MPMX19_01822	0.71	-1.4
1,905,026	+		MPMX19_01822	0.72	+0.6
1,905,146	+		MPMX19_01822	0.79	-1.4
1,905,146	+		MPMX19_01822	0.79	+0.3
1,905,146	+		MPMX19_01822	0.79	+0.3
1,905,146	+		MPMX19_01822	0.79	-1.5
1,905,146	+		MPMX19_01822	0.79	-1.8
1,905,147	-		MPMX19_01822	0.79	+0.0
1,905,147	-		MPMX19_01822	0.79	-1.4
1,905,395	+				-0.2
1,905,395	+				-0.4
1,905,395	+				+1.4
1,905,395	+				-0.4
1,905,395	+				-0.4
1,905,395	+				-0.2
1,905,396	-				+0.8
1,905,396	-				+0.1
1,905,396	-				-1.5
1,905,396	-				-1.2
1,905,396	-				-0.2
1,905,396	-				+0.3
1,905,396	-				-3.0
1,905,396	-				-1.5
1,905,396	-				+0.3
1,905,396	-				-0.3
1,905,566	+				-1.0
1,905,566	+				-1.5
1,905,566	+				-0.7
1,905,566	+				-1.7
1,905,566	+				-0.9
1,905,566	+				-1.6
1,905,566	+				+0.7
1,905,566	+				+0.3
1,905,566	+				-0.6
1,905,566	+				-0.2
1,905,566	+				+1.2
1,905,566	+				-1.3
1,905,567	-				-0.7
1,905,567	-				-0.9
1,905,567	-				-0.0
1,905,567	-				-0.5
1,905,567	-				+0.0
1,905,567	-				+1.3
1,905,567	-				+0.4
1,905,567	-				+0.3
1,905,567	-				-0.7
1,905,593	+				-1.1
1,905,593	+				-0.6
1,905,593	+				+0.0
1,905,593	+				-0.2
1,905,593	+				-0.1
1,905,593	+				-0.8
1,905,593	+				-1.2
1,905,593	+				+0.7
1,905,593	+				-0.9
1,905,595	+				-3.5
1,905,595	+				-1.1
1,905,595	+				-0.7
1,905,595	+				-0.4
1,905,595	+				+0.3
1,905,595	+				-1.2
1,905,595	+				-2.0
1,905,595	+				+1.0
1,905,595	+				-1.4
1,905,595	+				+0.5
1,905,595	+				-0.0
1,905,595	+				-1.7
1,905,595	+				+0.6
1,905,595	+				-2.9
1,905,595	+				-1.2
1,905,595	+				-0.4
1,905,595	+				-0.2
1,905,595	+				-1.9
1,905,595	+				+1.2
1,905,595	+				-0.7
1,905,595	+				-2.5
1,905,596	-				-1.2
1,905,613	+				-0.3
1,905,613	+				-0.4
1,905,613	+				-0.2
1,905,634	+				-0.3
1,905,634	+				-2.1