Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01216

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,265,601	-				-2.1
1,265,601	-				-0.2
1,265,601	-				+2.1
1,265,670	+				+0.2
1,265,670	+				-0.2
1,265,671	-				-0.9
1,265,671	-				-1.6
1,265,692	+				+0.3
1,265,692	+				-0.6
1,265,692	+				+1.2
1,265,692	+				-0.7
1,265,693	-				-0.5
1,265,869	+		MPMX19_01215	0.34	-1.9
1,265,869	+		MPMX19_01215	0.34	-0.4
1,265,869	+		MPMX19_01215	0.34	-0.8
1,265,869	+		MPMX19_01215	0.34	-1.7
1,265,869	+		MPMX19_01215	0.34	+1.2
1,265,869	+		MPMX19_01215	0.34	-0.8
1,265,869	+		MPMX19_01215	0.34	-0.9
1,265,869	+		MPMX19_01215	0.34	-1.8
1,265,869	+		MPMX19_01215	0.34	-0.9
1,265,869	+		MPMX19_01215	0.34	-1.0
1,265,870	-		MPMX19_01215	0.34	-0.1
1,265,870	-		MPMX19_01215	0.34	-0.2
1,265,870	-		MPMX19_01215	0.34	+0.2
1,265,870	-		MPMX19_01215	0.34	+1.1
1,265,870	-		MPMX19_01215	0.34	-0.0
1,265,870	-		MPMX19_01215	0.34	+0.3
1,265,870	-		MPMX19_01215	0.34	-0.3
1,265,870	-		MPMX19_01215	0.34	-0.4
1,265,870	-		MPMX19_01215	0.34	-0.3
1,265,870	-		MPMX19_01215	0.34	-0.4
1,265,870	-		MPMX19_01215	0.34	-2.2
1,265,870	-		MPMX19_01215	0.34	-1.8
1,265,870	-		MPMX19_01215	0.34	-0.0
1,265,870	-		MPMX19_01215	0.34	-0.2
1,265,870	-		MPMX19_01215	0.34	-3.0
1,265,870	-		MPMX19_01215	0.34	+0.6
1,265,870	-		MPMX19_01215	0.34	-2.1
1,265,870	-		MPMX19_01215	0.34	-0.9
1,265,870	-		MPMX19_01215	0.34	+2.0
1,265,887	+		MPMX19_01215	0.37	-0.0
1,265,887	+		MPMX19_01215	0.37	-0.6
1,265,887	+		MPMX19_01215	0.37	-1.2
1,265,887	+		MPMX19_01215	0.37	-2.0
1,265,887	+		MPMX19_01215	0.37	-0.6
1,265,887	+		MPMX19_01215	0.37	-2.0
1,265,887	+		MPMX19_01215	0.37	+0.3
1,265,887	+		MPMX19_01215	0.37	-2.0
1,265,887	+		MPMX19_01215	0.37	-1.8
1,265,887	+		MPMX19_01215	0.37	-0.4
1,265,888	-		MPMX19_01215	0.37	+0.1
1,265,888	-		MPMX19_01215	0.37	-1.6
1,265,888	-		MPMX19_01215	0.37	+0.5
1,265,888	-		MPMX19_01215	0.37	-0.6
1,265,888	-		MPMX19_01215	0.37	+0.8
1,265,888	-		MPMX19_01215	0.37	-0.2
1,265,888	-		MPMX19_01215	0.37	-0.3
1,265,900	+		MPMX19_01215	0.39	-1.6
1,265,900	+		MPMX19_01215	0.39	+0.2
1,265,900	+		MPMX19_01215	0.39	-1.4
1,265,900	+		MPMX19_01215	0.39	+1.4
1,265,901	-		MPMX19_01215	0.39	-0.8
1,265,901	-		MPMX19_01215	0.39	-1.4
1,265,901	-		MPMX19_01215	0.39	+1.1
1,265,901	-		MPMX19_01215	0.39	-0.3
1,265,901	-		MPMX19_01215	0.39	-1.6
1,265,901	-		MPMX19_01215	0.39	-0.2
1,265,914	+		MPMX19_01215	0.41	-1.4
1,265,914	+		MPMX19_01215	0.41	-0.4
1,265,914	+		MPMX19_01215	0.41	-0.8
1,265,914	+		MPMX19_01215	0.41	-2.9
1,265,914	+		MPMX19_01215	0.41	-0.0
1,265,915	-		MPMX19_01215	0.41	-0.0
1,265,915	-		MPMX19_01215	0.41	+0.2
1,265,915	-		MPMX19_01215	0.41	-1.0
1,265,915	-		MPMX19_01215	0.41	+1.2
1,265,915	-		MPMX19_01215	0.41	-0.6
1,265,915	-		MPMX19_01215	0.41	-2.0
1,265,915	-		MPMX19_01215	0.41	-2.0
1,265,915	-		MPMX19_01215	0.41	-0.1
1,265,993	+		MPMX19_01215	0.53	+1.4
1,266,091	+		MPMX19_01215	0.68	-0.4
1,266,091	+		MPMX19_01215	0.68	-0.3
1,266,091	+		MPMX19_01215	0.68	-1.6
1,266,091	+		MPMX19_01215	0.68	+0.2
1,266,091	+		MPMX19_01215	0.68	-1.6
1,266,091	+		MPMX19_01215	0.68	-0.9
1,266,091	+		MPMX19_01215	0.68	+0.8
1,266,091	+		MPMX19_01215	0.68	-0.8
1,266,091	+		MPMX19_01215	0.68	+0.5
1,266,091	+		MPMX19_01215	0.68	-1.0
1,266,091	+		MPMX19_01215	0.68	-0.4
1,266,091	+		MPMX19_01215	0.68	+0.5
1,266,091	+		MPMX19_01215	0.68	-0.7
1,266,092	-		MPMX19_01215	0.68	+0.2
1,266,092	-		MPMX19_01215	0.68	-0.6
1,266,092	-		MPMX19_01215	0.68	+1.1
1,266,092	-		MPMX19_01215	0.68	+0.6
1,266,092	-		MPMX19_01215	0.68	-0.2
1,266,092	-		MPMX19_01215	0.68	-0.9
1,266,092	-		MPMX19_01215	0.68	+1.4
1,266,092	-		MPMX19_01215	0.68	+0.2
1,266,092	-		MPMX19_01215	0.68	+0.5
1,266,145	+		MPMX19_01215	0.76	+0.2
1,266,145	+		MPMX19_01215	0.76	+0.6
1,266,145	+		MPMX19_01215	0.76	-0.4
1,266,145	+		MPMX19_01215	0.76	+0.0
1,266,146	-		MPMX19_01215	0.76	+0.4
1,266,146	-		MPMX19_01215	0.76	+1.3
1,266,146	-		MPMX19_01215	0.76	+1.2
1,266,146	-		MPMX19_01215	0.76	-0.6
1,266,146	-		MPMX19_01215	0.76	-0.5
1,266,146	-		MPMX19_01215	0.76	-1.6
1,266,146	-		MPMX19_01215	0.76	+0.2
1,266,146	-		MPMX19_01215	0.76	-0.5
1,266,205	+		MPMX19_01215	0.85	+0.3
1,266,205	+		MPMX19_01215	0.85	-0.8
1,266,205	+		MPMX19_01215	0.85	-1.1
1,266,205	+		MPMX19_01215	0.85	-0.4
1,266,205	+		MPMX19_01215	0.85	-1.0
1,266,205	+		MPMX19_01215	0.85	-1.5
1,266,206	-		MPMX19_01215	0.86	+1.6
1,266,206	-		MPMX19_01215	0.86	-0.8
1,266,206	-		MPMX19_01215	0.86	-2.1
1,266,206	-		MPMX19_01215	0.86	-0.1
1,266,206	-		MPMX19_01215	0.86	+1.6
1,266,315	+				-1.5
1,266,359	+				-0.1
1,266,360	-				+0.8
1,266,360	-				-0.1
1,266,389	-				+0.4
1,266,389	-				-1.5
1,266,470	+				+0.6
1,266,470	+				-1.9
1,266,470	+				-0.5
1,266,470	+				+0.2
1,266,470	+				+0.6
1,266,470	+				+1.1
1,266,470	+				-0.4
1,266,470	+				-2.2
1,266,470	+				+0.6
1,266,470	+				-0.4
1,266,470	+				-0.1
1,266,471	+				-1.4
1,266,471	-				-0.0
1,266,471	-				-0.1
1,266,471	-				+0.3
1,266,471	-				+0.0
1,266,471	-				+0.4
1,266,471	-				-0.6
1,266,471	-				-0.2
1,266,471	-				-1.2
1,266,471	-				+1.6
1,266,471	-				+0.4
1,266,471	-				-1.6
1,266,471	-				-0.7
1,266,539	+		MPMX19_01216	0.15	-1.1
1,266,539	+		MPMX19_01216	0.15	-0.8
1,266,539	+		MPMX19_01216	0.15	-1.6
1,266,539	+		MPMX19_01216	0.15	+0.5
1,266,539	+		MPMX19_01216	0.15	+0.1
1,266,539	+		MPMX19_01216	0.15	-1.4
1,266,540	-		MPMX19_01216	0.15	-1.6
1,266,540	-		MPMX19_01216	0.15	+0.1
1,266,540	-		MPMX19_01216	0.15	-0.1
1,266,540	-		MPMX19_01216	0.15	-0.3
1,266,557	+		MPMX19_01216	0.16	-0.8
1,266,557	+		MPMX19_01216	0.16	+1.4
1,266,557	+		MPMX19_01216	0.16	-0.3
1,266,557	+		MPMX19_01216	0.16	-0.8
1,266,557	+		MPMX19_01216	0.16	-0.6
1,266,557	+		MPMX19_01216	0.16	-0.4
1,266,557	+		MPMX19_01216	0.16	-0.7
1,266,557	+		MPMX19_01216	0.16	-0.3
1,266,557	+		MPMX19_01216	0.16	-0.2
1,266,557	+		MPMX19_01216	0.16	-0.2
1,266,557	+		MPMX19_01216	0.16	+0.0
1,266,557	+		MPMX19_01216	0.16	-0.6
1,266,557	+		MPMX19_01216	0.16	-1.8
1,266,557	+		MPMX19_01216	0.16	-0.9
1,266,557	+		MPMX19_01216	0.16	-1.2
1,266,557	+		MPMX19_01216	0.16	-0.6
1,266,557	+		MPMX19_01216	0.16	-1.2
1,266,557	+		MPMX19_01216	0.16	+0.8
1,266,557	+		MPMX19_01216	0.16	-1.2
1,266,557	+		MPMX19_01216	0.16	-0.4
1,266,557	+		MPMX19_01216	0.16	-1.2
1,266,557	+		MPMX19_01216	0.16	+0.2
1,266,557	+		MPMX19_01216	0.16	+0.8
1,266,557	+		MPMX19_01216	0.16	-2.3
1,266,557	+		MPMX19_01216	0.16	-1.5
1,266,557	+		MPMX19_01216	0.16	+0.1
1,266,557	+		MPMX19_01216	0.16	-0.4
1,266,557	+		MPMX19_01216	0.16	-1.3
1,266,557	+		MPMX19_01216	0.16	-0.2
1,266,557	+		MPMX19_01216	0.16	+0.2
1,266,557	+		MPMX19_01216	0.16	-2.1
1,266,557	+		MPMX19_01216	0.16	-1.3
1,266,557	+		MPMX19_01216	0.16	-0.8
1,266,557	+		MPMX19_01216	0.16	-1.1
1,266,557	+		MPMX19_01216	0.16	+0.8
1,266,557	+		MPMX19_01216	0.16	+1.4
1,266,557	+		MPMX19_01216	0.16	-0.0
1,266,557	+		MPMX19_01216	0.16	-0.6
1,266,557	+		MPMX19_01216	0.16	-1.8
1,266,557	+		MPMX19_01216	0.16	-1.9
1,266,557	+		MPMX19_01216	0.16	-1.2
1,266,557	+		MPMX19_01216	0.16	+0.4
1,266,558	-		MPMX19_01216	0.17	+1.0
1,266,558	-		MPMX19_01216	0.17	+0.6
1,266,558	-		MPMX19_01216	0.17	+1.1
1,266,558	-		MPMX19_01216	0.17	-0.2
1,266,558	-		MPMX19_01216	0.17	-0.4
1,266,558	-		MPMX19_01216	0.17	-0.1
1,266,558	-		MPMX19_01216	0.17	-1.9
1,266,558	-		MPMX19_01216	0.17	-0.2
1,266,558	-		MPMX19_01216	0.17	-1.0
1,266,558	-		MPMX19_01216	0.17	-0.1
1,266,558	-		MPMX19_01216	0.17	-0.0
1,266,558	-		MPMX19_01216	0.17	+0.3
1,266,558	-		MPMX19_01216	0.17	-1.2
1,266,558	-		MPMX19_01216	0.17	-0.4
1,266,558	-		MPMX19_01216	0.17	-0.4
1,266,558	-		MPMX19_01216	0.17	-0.6
1,266,558	-		MPMX19_01216	0.17	-0.3
1,266,558	-		MPMX19_01216	0.17	-1.1
1,266,558	-		MPMX19_01216	0.17	-0.3
1,266,558	-		MPMX19_01216	0.17	+0.9
1,266,558	-		MPMX19_01216	0.17	+0.3
1,266,558	-		MPMX19_01216	0.17	-0.0
1,266,558	-		MPMX19_01216	0.17	-1.1
1,266,558	-		MPMX19_01216	0.17	-0.7
1,266,558	-		MPMX19_01216	0.17	-0.8
1,266,558	-		MPMX19_01216	0.17	-1.3
1,266,558	-		MPMX19_01216	0.17	+1.6
1,266,558	-		MPMX19_01216	0.17	-1.2
1,266,558	-		MPMX19_01216	0.17	+0.3
1,266,558	-		MPMX19_01216	0.17	-1.0
1,266,558	-		MPMX19_01216	0.17	+0.8
1,266,558	-		MPMX19_01216	0.17	-1.0
1,266,558	-		MPMX19_01216	0.17	-0.5
1,266,558	-		MPMX19_01216	0.17	+0.8
1,266,558	-		MPMX19_01216	0.17	-0.4
1,266,558	-		MPMX19_01216	0.17	-0.6
1,266,558	-		MPMX19_01216	0.17	-1.0
1,266,662	+		MPMX19_01216	0.27	-1.9
1,266,663	-		MPMX19_01216	0.27	+0.3
1,266,663	-		MPMX19_01216	0.27	-1.4
1,266,663	-		MPMX19_01216	0.27	-1.3
1,266,663	-		MPMX19_01216	0.27	+0.3
1,266,663	-		MPMX19_01216	0.27	+0.2
1,266,663	-		MPMX19_01216	0.27	+0.2
1,266,679	+		MPMX19_01216	0.29	+0.4
1,266,679	+		MPMX19_01216	0.29	-0.9
1,266,680	-		MPMX19_01216	0.29	-0.9
1,266,680	-		MPMX19_01216	0.29	-1.4
1,266,680	-		MPMX19_01216	0.29	-0.0
1,266,680	-		MPMX19_01216	0.29	-2.2
1,266,692	+		MPMX19_01216	0.30	-0.0
1,266,692	+		MPMX19_01216	0.30	+0.1
1,266,692	+		MPMX19_01216	0.30	-1.6
1,266,692	+		MPMX19_01216	0.30	+0.3
1,266,692	+		MPMX19_01216	0.30	-1.0
1,266,693	-		MPMX19_01216	0.30	-1.6
1,266,693	-		MPMX19_01216	0.30	+0.2
1,266,693	-		MPMX19_01216	0.30	-0.5
1,266,693	-		MPMX19_01216	0.30	+0.2
1,266,693	-		MPMX19_01216	0.30	-0.2
1,266,693	-		MPMX19_01216	0.30	+0.1
1,266,693	-		MPMX19_01216	0.30	+1.1
1,266,752	+		MPMX19_01216	0.36	-0.6
1,266,752	+		MPMX19_01216	0.36	-2.1
1,266,752	+		MPMX19_01216	0.36	+0.3
1,266,752	+		MPMX19_01216	0.36	+0.4
1,266,752	+		MPMX19_01216	0.36	+0.9
1,266,752	+		MPMX19_01216	0.36	-1.0
1,266,752	+		MPMX19_01216	0.36	-1.6
1,266,752	+		MPMX19_01216	0.36	-0.3
1,266,752	+		MPMX19_01216	0.36	+1.1
1,266,752	+		MPMX19_01216	0.36	-1.2
1,266,752	+		MPMX19_01216	0.36	-0.6
1,266,753	-		MPMX19_01216	0.36	-0.0
1,266,753	-		MPMX19_01216	0.36	-1.2
1,266,753	-		MPMX19_01216	0.36	-1.0
1,266,753	-		MPMX19_01216	0.36	-2.0
1,266,753	-		MPMX19_01216	0.36	-0.9
1,266,753	-		MPMX19_01216	0.36	-0.2
1,266,753	-		MPMX19_01216	0.36	-0.1
1,266,753	-		MPMX19_01216	0.36	-0.7
1,266,753	-		MPMX19_01216	0.36	-0.4
1,266,753	-		MPMX19_01216	0.36	-1.5
1,266,753	-		MPMX19_01216	0.36	-2.8
1,266,753	-		MPMX19_01216	0.36	-0.6
1,266,753	-		MPMX19_01216	0.36	-0.2
1,266,755	+		MPMX19_01216	0.37	-1.2
1,266,755	+		MPMX19_01216	0.37	+0.0
1,266,755	+		MPMX19_01216	0.37	-0.0
1,266,755	+		MPMX19_01216	0.37	+0.3
1,266,755	+		MPMX19_01216	0.37	-1.6
1,266,755	+		MPMX19_01216	0.37	-1.7
1,266,755	+		MPMX19_01216	0.37	-2.1
1,266,755	+		MPMX19_01216	0.37	+0.2
1,266,755	+		MPMX19_01216	0.37	+1.6
1,266,756	-		MPMX19_01216	0.37	+1.4
1,266,756	-		MPMX19_01216	0.37	-0.8
1,266,756	-		MPMX19_01216	0.37	-0.7
1,266,756	-		MPMX19_01216	0.37	-1.3
1,266,756	-		MPMX19_01216	0.37	+0.3
1,266,756	-		MPMX19_01216	0.37	+1.2
1,266,756	-		MPMX19_01216	0.37	-1.0
1,266,920	+		MPMX19_01216	0.53	+0.7
1,266,920	+		MPMX19_01216	0.53	+1.3
1,266,921	-		MPMX19_01216	0.53	+0.0
1,266,921	-		MPMX19_01216	0.53	-0.9
1,266,921	-		MPMX19_01216	0.53	-0.0
1,266,921	-		MPMX19_01216	0.53	-0.1
1,266,921	-		MPMX19_01216	0.53	-0.9
1,266,995	+		MPMX19_01216	0.61	-1.2
1,266,995	+		MPMX19_01216	0.61	-0.4
1,266,995	+		MPMX19_01216	0.61	+0.3
1,266,996	-		MPMX19_01216	0.61	-0.4
1,266,996	-		MPMX19_01216	0.61	+0.1
1,266,996	-		MPMX19_01216	0.61	-0.8
1,267,241	+		MPMX19_01216	0.86	+0.1
1,267,241	+		MPMX19_01216	0.86	+0.6
1,267,241	+		MPMX19_01216	0.86	+0.3
1,267,241	+		MPMX19_01216	0.86	-0.3
1,267,241	+		MPMX19_01216	0.86	-0.4
1,267,241	+		MPMX19_01216	0.86	+1.3
1,267,241	+		MPMX19_01216	0.86	+0.6
1,267,241	+		MPMX19_01216	0.86	+0.7
1,267,241	+		MPMX19_01216	0.86	+0.2
1,267,241	+		MPMX19_01216	0.86	-2.3
1,267,241	+		MPMX19_01216	0.86	-0.3
1,267,241	+		MPMX19_01216	0.86	-2.8
1,267,242	-		MPMX19_01216	0.86	-1.0
1,267,242	-		MPMX19_01216	0.86	-0.1
1,267,242	-		MPMX19_01216	0.86	-0.6
1,267,242	-		MPMX19_01216	0.86	-0.2
1,267,242	-		MPMX19_01216	0.86	-0.8
1,267,242	-		MPMX19_01216	0.86	-0.9
1,267,242	-		MPMX19_01216	0.86	+0.1
1,267,242	-		MPMX19_01216	0.86	-0.7
1,267,242	-		MPMX19_01216	0.86	+0.6
1,267,242	-		MPMX19_01216	0.86	+0.5
1,267,242	-		MPMX19_01216	0.86	-0.2
1,267,242	-		MPMX19_01216	0.86	-1.7
1,267,242	-		MPMX19_01216	0.86	+0.4
1,267,242	-		MPMX19_01216	0.86	-0.6
1,267,343	+				-0.8
1,267,343	+				-0.9
1,267,343	+				-0.2
1,267,343	+				+0.1
1,267,343	+				-1.1
1,267,343	+				-0.2
1,267,344	-				-0.8
1,267,344	-				-0.6
1,267,344	-				+0.4
1,267,344	-				+0.8
1,267,344	-				-0.5
1,267,344	-				-0.8
1,267,376	+				-0.7
1,267,376	+				-2.0
1,267,376	+				-2.1
1,267,376	+				-0.3
1,267,376	+				-0.4
1,267,376	+				+1.1
1,267,376	+				+0.2
1,267,376	+				-0.9
1,267,376	+				-0.0
1,267,376	+				-0.7
1,267,376	+				-1.2
1,267,376	+				-2.2
1,267,376	+				-0.8
1,267,376	+				+0.3
1,267,376	+				-1.5
1,267,376	+				-1.2
1,267,376	+				-0.8
1,267,376	+				-0.5
1,267,376	+				-1.8
1,267,376	+				+0.0
1,267,376	+				-0.2
1,267,376	+				-1.3
1,267,377	-				+0.4
1,267,377	-				-0.0
1,267,377	-				+0.1
1,267,377	-				+1.4
1,267,377	-				+0.2
1,267,377	-				-1.6
1,267,377	-				-0.4
1,267,377	-				+0.4
1,267,377	-				-0.9
1,267,377	-				-0.7
1,267,377	-				-0.2
1,267,377	-				-2.3
1,267,377	-				-0.8
1,267,377	-				-0.9
1,267,377	-				-0.5
1,267,377	-				+0.4
1,267,377	-				-1.2
1,267,377	-				-1.9
1,267,377	-				+0.3
1,267,377	-				-1.0
1,267,377	-				+0.1
1,267,377	-				-1.1
1,267,439	+				-0.4
1,267,439	+				-2.2
1,267,439	+				-1.0
1,267,439	+				-0.5
1,267,439	+				-0.8
1,267,440	-				+0.7
1,267,440	-				-1.3
1,267,440	-				-2.8
1,267,440	-				-1.4
1,267,440	-				-1.0
1,267,577	+		MPMX19_01217	0.14	+0.3
1,267,577	+		MPMX19_01217	0.14	-1.6
1,267,577	+		MPMX19_01217	0.14	-0.9
1,267,577	+		MPMX19_01217	0.14	-1.8
1,267,577	+		MPMX19_01217	0.14	+0.5
1,267,577	+		MPMX19_01217	0.14	-1.0
1,267,578	-		MPMX19_01217	0.14	-1.0
1,267,578	-		MPMX19_01217	0.14	-1.2
1,267,578	-		MPMX19_01217	0.14	-0.3
1,267,578	-		MPMX19_01217	0.14	-2.5
1,267,934	+		MPMX19_01217	0.48	-0.0