Experiment: Peptone 2.5 mg/mL (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05517 and BACOVA_05518 are separated by 34 nucleotides BACOVA_05518 and BACOVA_05519 are separated by 1 nucleotides
BACOVA_05517: BACOVA_05517 - glycosyltransferase, group 1 family protein, at 1,027,767 to 1,028,909
_05517
BACOVA_05518: BACOVA_05518 - glycosyltransferase, group 1 family protein, at 1,028,944 to 1,030,122
_05518
BACOVA_05519: BACOVA_05519 - hypothetical protein, at 1,030,124 to 1,031,377
_05519
Position (kb)
1028
1029
1030
1031 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1028.006 kb on - strand, within BACOVA_05517 at 1028.048 kb on - strand, within BACOVA_05517 at 1028.050 kb on - strand, within BACOVA_05517 at 1028.050 kb on - strand, within BACOVA_05517 at 1028.051 kb on + strand, within BACOVA_05517 at 1028.052 kb on - strand, within BACOVA_05517 at 1028.381 kb on - strand, within BACOVA_05517 at 1028.433 kb on - strand, within BACOVA_05517 at 1028.444 kb on + strand, within BACOVA_05517 at 1028.523 kb on - strand, within BACOVA_05517 at 1028.523 kb on - strand, within BACOVA_05517 at 1028.523 kb on - strand, within BACOVA_05517 at 1028.554 kb on - strand, within BACOVA_05517 at 1028.558 kb on - strand, within BACOVA_05517 at 1028.558 kb on - strand, within BACOVA_05517 at 1028.606 kb on + strand, within BACOVA_05517 at 1028.714 kb on - strand, within BACOVA_05517 at 1028.735 kb on + strand, within BACOVA_05517 at 1028.808 kb on - strand at 1028.808 kb on - strand at 1028.808 kb on - strand at 1028.811 kb on + strand at 1028.811 kb on + strand at 1028.834 kb on + strand at 1028.835 kb on - strand at 1028.882 kb on - strand at 1028.904 kb on - strand at 1028.908 kb on - strand at 1028.916 kb on - strand at 1028.916 kb on - strand at 1028.939 kb on - strand at 1028.975 kb on - strand at 1028.975 kb on - strand at 1029.006 kb on - strand at 1029.014 kb on - strand at 1029.045 kb on + strand at 1029.046 kb on - strand at 1029.051 kb on - strand at 1029.051 kb on - strand at 1029.060 kb on - strand at 1029.060 kb on - strand at 1029.064 kb on - strand, within BACOVA_05518 at 1029.066 kb on + strand, within BACOVA_05518 at 1029.067 kb on - strand, within BACOVA_05518 at 1029.080 kb on + strand, within BACOVA_05518 at 1029.081 kb on - strand, within BACOVA_05518 at 1029.081 kb on - strand, within BACOVA_05518 at 1029.087 kb on + strand, within BACOVA_05518 at 1029.129 kb on - strand, within BACOVA_05518 at 1029.129 kb on - strand, within BACOVA_05518 at 1029.132 kb on + strand, within BACOVA_05518 at 1029.133 kb on - strand, within BACOVA_05518 at 1029.136 kb on - strand, within BACOVA_05518 at 1029.136 kb on - strand, within BACOVA_05518 at 1029.136 kb on - strand, within BACOVA_05518 at 1029.139 kb on - strand, within BACOVA_05518 at 1029.139 kb on - strand, within BACOVA_05518 at 1029.139 kb on - strand, within BACOVA_05518 at 1029.182 kb on - strand, within BACOVA_05518 at 1029.201 kb on - strand, within BACOVA_05518 at 1029.201 kb on - strand, within BACOVA_05518 at 1029.204 kb on + strand, within BACOVA_05518 at 1029.204 kb on + strand, within BACOVA_05518 at 1029.206 kb on + strand, within BACOVA_05518 at 1029.207 kb on - strand, within BACOVA_05518 at 1029.213 kb on - strand, within BACOVA_05518 at 1029.213 kb on - strand, within BACOVA_05518 at 1029.248 kb on + strand, within BACOVA_05518 at 1029.249 kb on - strand, within BACOVA_05518 at 1029.249 kb on - strand, within BACOVA_05518 at 1029.249 kb on - strand, within BACOVA_05518 at 1029.256 kb on - strand, within BACOVA_05518 at 1029.256 kb on - strand, within BACOVA_05518 at 1029.261 kb on - strand, within BACOVA_05518 at 1029.280 kb on - strand, within BACOVA_05518 at 1029.282 kb on + strand, within BACOVA_05518 at 1029.288 kb on - strand, within BACOVA_05518 at 1029.288 kb on - strand, within BACOVA_05518 at 1029.396 kb on - strand, within BACOVA_05518 at 1029.396 kb on - strand, within BACOVA_05518 at 1029.396 kb on - strand, within BACOVA_05518 at 1029.440 kb on + strand, within BACOVA_05518 at 1029.468 kb on + strand, within BACOVA_05518 at 1029.496 kb on - strand, within BACOVA_05518 at 1029.575 kb on - strand, within BACOVA_05518 at 1029.585 kb on - strand, within BACOVA_05518 at 1029.631 kb on - strand, within BACOVA_05518 at 1029.654 kb on - strand, within BACOVA_05518 at 1029.661 kb on + strand, within BACOVA_05518 at 1029.693 kb on - strand, within BACOVA_05518 at 1029.696 kb on + strand, within BACOVA_05518 at 1029.699 kb on - strand, within BACOVA_05518 at 1029.714 kb on - strand, within BACOVA_05518 at 1029.714 kb on - strand, within BACOVA_05518 at 1029.719 kb on - strand, within BACOVA_05518 at 1029.740 kb on - strand, within BACOVA_05518 at 1029.740 kb on - strand, within BACOVA_05518 at 1029.742 kb on - strand, within BACOVA_05518 at 1029.753 kb on - strand, within BACOVA_05518 at 1029.753 kb on - strand, within BACOVA_05518 at 1029.763 kb on + strand, within BACOVA_05518 at 1029.820 kb on - strand, within BACOVA_05518 at 1029.820 kb on - strand, within BACOVA_05518 at 1029.840 kb on - strand, within BACOVA_05518 at 1029.841 kb on + strand, within BACOVA_05518 at 1029.874 kb on - strand, within BACOVA_05518 at 1029.918 kb on + strand, within BACOVA_05518 at 1029.972 kb on - strand, within BACOVA_05518 at 1029.972 kb on - strand, within BACOVA_05518 at 1029.985 kb on - strand, within BACOVA_05518 at 1030.021 kb on + strand at 1030.024 kb on - strand at 1030.045 kb on - strand at 1030.052 kb on - strand at 1030.052 kb on - strand at 1030.116 kb on - strand at 1030.142 kb on - strand at 1030.169 kb on - strand at 1030.252 kb on + strand, within BACOVA_05519 at 1030.253 kb on - strand, within BACOVA_05519 at 1030.255 kb on + strand, within BACOVA_05519 at 1030.258 kb on - strand, within BACOVA_05519 at 1030.258 kb on - strand, within BACOVA_05519 at 1030.294 kb on - strand, within BACOVA_05519 at 1030.294 kb on - strand, within BACOVA_05519 at 1030.297 kb on + strand, within BACOVA_05519 at 1030.298 kb on - strand, within BACOVA_05519 at 1030.317 kb on + strand, within BACOVA_05519 at 1030.317 kb on + strand, within BACOVA_05519 at 1030.317 kb on + strand, within BACOVA_05519 at 1030.317 kb on + strand, within BACOVA_05519 at 1030.318 kb on - strand, within BACOVA_05519 at 1030.318 kb on - strand, within BACOVA_05519 at 1030.408 kb on - strand, within BACOVA_05519 at 1030.412 kb on - strand, within BACOVA_05519 at 1030.587 kb on - strand, within BACOVA_05519 at 1030.600 kb on - strand, within BACOVA_05519 at 1030.614 kb on + strand, within BACOVA_05519 at 1030.615 kb on - strand, within BACOVA_05519 at 1030.646 kb on - strand, within BACOVA_05519 at 1030.646 kb on - strand, within BACOVA_05519 at 1030.680 kb on - strand, within BACOVA_05519 at 1030.699 kb on - strand, within BACOVA_05519 at 1030.792 kb on - strand, within BACOVA_05519 at 1030.796 kb on + strand, within BACOVA_05519 at 1030.797 kb on - strand, within BACOVA_05519 at 1030.798 kb on + strand, within BACOVA_05519 at 1030.799 kb on - strand, within BACOVA_05519 at 1030.801 kb on + strand, within BACOVA_05519 at 1030.819 kb on - strand, within BACOVA_05519 at 1030.850 kb on - strand, within BACOVA_05519 at 1030.913 kb on - strand, within BACOVA_05519 at 1030.917 kb on + strand, within BACOVA_05519 at 1030.942 kb on + strand, within BACOVA_05519 at 1031.007 kb on - strand, within BACOVA_05519 at 1031.008 kb on + strand, within BACOVA_05519 at 1031.008 kb on + strand, within BACOVA_05519 at 1031.023 kb on - strand, within BACOVA_05519 at 1031.050 kb on + strand, within BACOVA_05519 at 1031.054 kb on - strand, within BACOVA_05519 at 1031.055 kb on + strand, within BACOVA_05519 at 1031.055 kb on + strand, within BACOVA_05519 at 1031.060 kb on - strand, within BACOVA_05519 at 1031.084 kb on - strand, within BACOVA_05519 at 1031.119 kb on + strand, within BACOVA_05519
Per-strain Table
Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media remove 1,028,006 - BACOVA_05517 0.21 +0.1 1,028,048 - BACOVA_05517 0.25 -0.5 1,028,050 - BACOVA_05517 0.25 +0.3 1,028,050 - BACOVA_05517 0.25 +0.1 1,028,051 + BACOVA_05517 0.25 -1.8 1,028,052 - BACOVA_05517 0.25 +1.1 1,028,381 - BACOVA_05517 0.54 +1.3 1,028,433 - BACOVA_05517 0.58 +0.2 1,028,444 + BACOVA_05517 0.59 +1.2 1,028,523 - BACOVA_05517 0.66 -0.5 1,028,523 - BACOVA_05517 0.66 +0.1 1,028,523 - BACOVA_05517 0.66 -1.2 1,028,554 - BACOVA_05517 0.69 +0.5 1,028,558 - BACOVA_05517 0.69 -2.5 1,028,558 - BACOVA_05517 0.69 -0.7 1,028,606 + BACOVA_05517 0.73 -0.7 1,028,714 - BACOVA_05517 0.83 -2.6 1,028,735 + BACOVA_05517 0.85 -0.2 1,028,808 - +0.4 1,028,808 - +0.7 1,028,808 - -1.4 1,028,811 + -1.0 1,028,811 + +0.5 1,028,834 + +1.2 1,028,835 - -1.9 1,028,882 - +0.6 1,028,904 - +0.1 1,028,908 - -1.2 1,028,916 - -2.3 1,028,916 - -0.6 1,028,939 - -0.5 1,028,975 - -0.8 1,028,975 - -0.5 1,029,006 - +1.6 1,029,014 - -0.2 1,029,045 + +0.2 1,029,046 - +1.1 1,029,051 - +0.9 1,029,051 - +2.2 1,029,060 - -1.2 1,029,060 - +1.0 1,029,064 - BACOVA_05518 0.10 -1.5 1,029,066 + BACOVA_05518 0.10 -0.8 1,029,067 - BACOVA_05518 0.10 +0.3 1,029,080 + BACOVA_05518 0.12 -0.8 1,029,081 - BACOVA_05518 0.12 -0.1 1,029,081 - BACOVA_05518 0.12 -0.1 1,029,087 + BACOVA_05518 0.12 -1.1 1,029,129 - BACOVA_05518 0.16 -0.8 1,029,129 - BACOVA_05518 0.16 +0.3 1,029,132 + BACOVA_05518 0.16 +1.4 1,029,133 - BACOVA_05518 0.16 -1.1 1,029,136 - BACOVA_05518 0.16 -0.7 1,029,136 - BACOVA_05518 0.16 +0.0 1,029,136 - BACOVA_05518 0.16 +0.4 1,029,139 - BACOVA_05518 0.17 -0.3 1,029,139 - BACOVA_05518 0.17 +0.6 1,029,139 - BACOVA_05518 0.17 -0.5 1,029,182 - BACOVA_05518 0.20 -1.6 1,029,201 - BACOVA_05518 0.22 +0.1 1,029,201 - BACOVA_05518 0.22 +1.3 1,029,204 + BACOVA_05518 0.22 -0.3 1,029,204 + BACOVA_05518 0.22 -0.2 1,029,206 + BACOVA_05518 0.22 +1.1 1,029,207 - BACOVA_05518 0.22 -0.2 1,029,213 - BACOVA_05518 0.23 +0.7 1,029,213 - BACOVA_05518 0.23 +0.6 1,029,248 + BACOVA_05518 0.26 +0.8 1,029,249 - BACOVA_05518 0.26 +0.9 1,029,249 - BACOVA_05518 0.26 +1.0 1,029,249 - BACOVA_05518 0.26 +0.1 1,029,256 - BACOVA_05518 0.26 +0.1 1,029,256 - BACOVA_05518 0.26 +0.7 1,029,261 - BACOVA_05518 0.27 +0.3 1,029,280 - BACOVA_05518 0.28 -1.3 1,029,282 + BACOVA_05518 0.29 -0.7 1,029,288 - BACOVA_05518 0.29 +1.7 1,029,288 - BACOVA_05518 0.29 -0.8 1,029,396 - BACOVA_05518 0.38 -0.6 1,029,396 - BACOVA_05518 0.38 +0.4 1,029,396 - BACOVA_05518 0.38 -1.7 1,029,440 + BACOVA_05518 0.42 -0.7 1,029,468 + BACOVA_05518 0.44 +0.5 1,029,496 - BACOVA_05518 0.47 -0.2 1,029,575 - BACOVA_05518 0.54 +0.2 1,029,585 - BACOVA_05518 0.54 +0.6 1,029,631 - BACOVA_05518 0.58 +0.5 1,029,654 - BACOVA_05518 0.60 +1.1 1,029,661 + BACOVA_05518 0.61 -1.4 1,029,693 - BACOVA_05518 0.64 +0.9 1,029,696 + BACOVA_05518 0.64 +0.4 1,029,699 - BACOVA_05518 0.64 +0.4 1,029,714 - BACOVA_05518 0.65 -1.1 1,029,714 - BACOVA_05518 0.65 +0.8 1,029,719 - BACOVA_05518 0.66 -0.2 1,029,740 - BACOVA_05518 0.68 +0.7 1,029,740 - BACOVA_05518 0.68 -0.8 1,029,742 - BACOVA_05518 0.68 -0.6 1,029,753 - BACOVA_05518 0.69 -2.1 1,029,753 - BACOVA_05518 0.69 +0.8 1,029,763 + BACOVA_05518 0.69 +0.5 1,029,820 - BACOVA_05518 0.74 -0.3 1,029,820 - BACOVA_05518 0.74 -0.3 1,029,840 - BACOVA_05518 0.76 +0.6 1,029,841 + BACOVA_05518 0.76 -1.5 1,029,874 - BACOVA_05518 0.79 +0.1 1,029,918 + BACOVA_05518 0.83 -0.4 1,029,972 - BACOVA_05518 0.87 +1.7 1,029,972 - BACOVA_05518 0.87 -0.4 1,029,985 - BACOVA_05518 0.88 +0.3 1,030,021 + +0.1 1,030,024 - +0.7 1,030,045 - +0.2 1,030,052 - -2.2 1,030,052 - -1.4 1,030,116 - -1.0 1,030,142 - -0.4 1,030,169 - +2.4 1,030,252 + BACOVA_05519 0.10 +0.5 1,030,253 - BACOVA_05519 0.10 +0.2 1,030,255 + BACOVA_05519 0.10 -0.3 1,030,258 - BACOVA_05519 0.11 -1.2 1,030,258 - BACOVA_05519 0.11 -1.3 1,030,294 - BACOVA_05519 0.14 +1.7 1,030,294 - BACOVA_05519 0.14 -0.3 1,030,297 + BACOVA_05519 0.14 -1.6 1,030,298 - BACOVA_05519 0.14 -0.7 1,030,317 + BACOVA_05519 0.15 -0.7 1,030,317 + BACOVA_05519 0.15 +0.4 1,030,317 + BACOVA_05519 0.15 -0.3 1,030,317 + BACOVA_05519 0.15 -3.4 1,030,318 - BACOVA_05519 0.15 +0.6 1,030,318 - BACOVA_05519 0.15 -0.8 1,030,408 - BACOVA_05519 0.23 -0.9 1,030,412 - BACOVA_05519 0.23 +0.7 1,030,587 - BACOVA_05519 0.37 -1.9 1,030,600 - BACOVA_05519 0.38 +0.4 1,030,614 + BACOVA_05519 0.39 +0.5 1,030,615 - BACOVA_05519 0.39 -0.8 1,030,646 - BACOVA_05519 0.42 +0.2 1,030,646 - BACOVA_05519 0.42 +0.0 1,030,680 - BACOVA_05519 0.44 +1.0 1,030,699 - BACOVA_05519 0.46 -1.7 1,030,792 - BACOVA_05519 0.53 -0.8 1,030,796 + BACOVA_05519 0.54 -0.5 1,030,797 - BACOVA_05519 0.54 +0.1 1,030,798 + BACOVA_05519 0.54 -0.3 1,030,799 - BACOVA_05519 0.54 -0.3 1,030,801 + BACOVA_05519 0.54 +1.5 1,030,819 - BACOVA_05519 0.55 +0.6 1,030,850 - BACOVA_05519 0.58 -1.2 1,030,913 - BACOVA_05519 0.63 -1.5 1,030,917 + BACOVA_05519 0.63 -0.6 1,030,942 + BACOVA_05519 0.65 -0.1 1,031,007 - BACOVA_05519 0.70 +0.6 1,031,008 + BACOVA_05519 0.70 -1.8 1,031,008 + BACOVA_05519 0.70 -0.5 1,031,023 - BACOVA_05519 0.72 -0.4 1,031,050 + BACOVA_05519 0.74 +0.6 1,031,054 - BACOVA_05519 0.74 +0.9 1,031,055 + BACOVA_05519 0.74 -0.9 1,031,055 + BACOVA_05519 0.74 +0.1 1,031,060 - BACOVA_05519 0.75 +1.3 1,031,084 - BACOVA_05519 0.77 +0.7 1,031,119 + BACOVA_05519 0.79 +0.3
Or see this region's nucleotide sequence