Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03151

Experiment: Peptone 2.5 mg/mL (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03149 and BACOVA_03150 are separated by 54 nucleotidesBACOVA_03150 and BACOVA_03151 are separated by 36 nucleotidesBACOVA_03151 and BACOVA_03152 are separated by 56 nucleotides BACOVA_03149: BACOVA_03149 - hypothetical protein, at 238,008 to 238,340 _03149 BACOVA_03150: BACOVA_03150 - leucine Rich Repeat protein, at 238,395 to 239,135 _03150 BACOVA_03151: BACOVA_03151 - peptidase, M28 family, at 239,172 to 240,173 _03151 BACOVA_03152: BACOVA_03152 - acetyltransferase, GNAT family, at 240,230 to 240,979 _03152 Position (kb) 239 240 241Strain fitness (log2 ratio) -2 -1 0 1 2 3at 238.196 kb on - strand, within BACOVA_03149at 238.219 kb on + strand, within BACOVA_03149at 238.219 kb on + strand, within BACOVA_03149at 238.220 kb on - strand, within BACOVA_03149at 238.250 kb on - strand, within BACOVA_03149at 238.282 kb on + strand, within BACOVA_03149at 238.283 kb on - strand, within BACOVA_03149at 238.283 kb on - strand, within BACOVA_03149at 238.283 kb on - strand, within BACOVA_03149at 238.285 kb on - strand, within BACOVA_03149at 238.286 kb on + strand, within BACOVA_03149at 238.286 kb on + strand, within BACOVA_03149at 238.286 kb on + strand, within BACOVA_03149at 238.286 kb on + strand, within BACOVA_03149at 238.286 kb on + strand, within BACOVA_03149at 238.287 kb on - strand, within BACOVA_03149at 238.287 kb on - strand, within BACOVA_03149at 238.287 kb on - strand, within BACOVA_03149at 238.287 kb on - strand, within BACOVA_03149at 238.287 kb on - strand, within BACOVA_03149at 238.287 kb on - strand, within BACOVA_03149at 238.287 kb on - strand, within BACOVA_03149at 238.299 kb on - strand, within BACOVA_03149at 238.306 kb on + strand, within BACOVA_03149at 238.307 kb on - strandat 238.308 kb on + strandat 238.309 kb on - strandat 238.309 kb on - strandat 238.338 kb on + strandat 238.338 kb on + strandat 238.339 kb on - strandat 238.344 kb on - strandat 238.349 kb on + strandat 238.351 kb on + strandat 238.351 kb on + strandat 238.351 kb on + strandat 238.352 kb on - strandat 238.383 kb on + strandat 238.457 kb on + strandat 238.469 kb on + strand, within BACOVA_03150at 238.469 kb on + strand, within BACOVA_03150at 238.469 kb on + strand, within BACOVA_03150at 238.485 kb on - strand, within BACOVA_03150at 238.547 kb on + strand, within BACOVA_03150at 238.548 kb on - strand, within BACOVA_03150at 238.549 kb on + strand, within BACOVA_03150at 238.582 kb on + strand, within BACOVA_03150at 238.617 kb on + strand, within BACOVA_03150at 238.626 kb on + strand, within BACOVA_03150at 238.627 kb on - strand, within BACOVA_03150at 238.628 kb on + strand, within BACOVA_03150at 238.677 kb on - strand, within BACOVA_03150at 238.691 kb on + strand, within BACOVA_03150at 238.699 kb on + strand, within BACOVA_03150at 238.699 kb on + strand, within BACOVA_03150at 238.699 kb on + strand, within BACOVA_03150at 238.700 kb on - strand, within BACOVA_03150at 238.744 kb on + strand, within BACOVA_03150at 238.744 kb on + strand, within BACOVA_03150at 238.781 kb on + strand, within BACOVA_03150at 238.782 kb on - strand, within BACOVA_03150at 238.783 kb on + strand, within BACOVA_03150at 238.813 kb on + strand, within BACOVA_03150at 238.824 kb on + strand, within BACOVA_03150at 238.825 kb on - strand, within BACOVA_03150at 238.862 kb on + strand, within BACOVA_03150at 238.863 kb on - strand, within BACOVA_03150at 238.865 kb on + strand, within BACOVA_03150at 238.866 kb on - strand, within BACOVA_03150at 238.889 kb on + strand, within BACOVA_03150at 238.890 kb on - strand, within BACOVA_03150at 238.898 kb on - strand, within BACOVA_03150at 238.898 kb on - strand, within BACOVA_03150at 238.898 kb on - strand, within BACOVA_03150at 238.930 kb on + strand, within BACOVA_03150at 238.931 kb on - strand, within BACOVA_03150at 238.941 kb on + strand, within BACOVA_03150at 238.980 kb on - strand, within BACOVA_03150at 238.980 kb on - strand, within BACOVA_03150at 239.060 kb on + strand, within BACOVA_03150at 239.066 kb on + strandat 239.066 kb on + strandat 239.087 kb on + strandat 239.139 kb on - strandat 239.155 kb on + strandat 239.155 kb on + strandat 239.162 kb on + strandat 239.162 kb on + strandat 239.166 kb on + strandat 239.166 kb on + strandat 239.167 kb on - strandat 239.167 kb on - strandat 239.167 kb on - strandat 239.167 kb on - strandat 239.167 kb on - strandat 239.224 kb on + strandat 239.262 kb on - strandat 239.285 kb on + strand, within BACOVA_03151at 239.288 kb on + strand, within BACOVA_03151at 239.361 kb on + strand, within BACOVA_03151at 239.362 kb on - strand, within BACOVA_03151at 239.362 kb on - strand, within BACOVA_03151at 239.363 kb on + strand, within BACOVA_03151at 239.364 kb on - strand, within BACOVA_03151at 239.378 kb on - strand, within BACOVA_03151at 239.392 kb on + strand, within BACOVA_03151at 239.392 kb on + strand, within BACOVA_03151at 239.412 kb on + strand, within BACOVA_03151at 239.433 kb on + strand, within BACOVA_03151at 239.434 kb on - strand, within BACOVA_03151at 239.485 kb on + strand, within BACOVA_03151at 239.490 kb on - strand, within BACOVA_03151at 239.558 kb on + strand, within BACOVA_03151at 239.568 kb on + strand, within BACOVA_03151at 239.568 kb on + strand, within BACOVA_03151at 239.599 kb on + strand, within BACOVA_03151at 239.600 kb on - strand, within BACOVA_03151at 239.632 kb on + strand, within BACOVA_03151at 239.632 kb on + strand, within BACOVA_03151at 239.632 kb on + strand, within BACOVA_03151at 239.633 kb on - strand, within BACOVA_03151at 239.634 kb on + strand, within BACOVA_03151at 239.684 kb on - strand, within BACOVA_03151at 239.775 kb on - strand, within BACOVA_03151at 239.803 kb on + strand, within BACOVA_03151at 239.846 kb on + strand, within BACOVA_03151at 239.886 kb on + strand, within BACOVA_03151at 240.024 kb on - strand, within BACOVA_03151at 240.040 kb on - strand, within BACOVA_03151at 240.044 kb on + strand, within BACOVA_03151at 240.045 kb on - strand, within BACOVA_03151at 240.045 kb on - strand, within BACOVA_03151at 240.113 kb on - strandat 240.122 kb on + strandat 240.263 kb on - strandat 240.298 kb on - strandat 240.302 kb on + strandat 240.353 kb on - strand, within BACOVA_03152at 240.357 kb on - strand, within BACOVA_03152at 240.365 kb on - strand, within BACOVA_03152at 240.396 kb on + strand, within BACOVA_03152at 240.396 kb on + strand, within BACOVA_03152at 240.418 kb on - strand, within BACOVA_03152at 240.421 kb on + strand, within BACOVA_03152at 240.424 kb on - strand, within BACOVA_03152at 240.429 kb on + strand, within BACOVA_03152at 240.429 kb on + strand, within BACOVA_03152at 240.442 kb on + strand, within BACOVA_03152at 240.443 kb on - strand, within BACOVA_03152at 240.443 kb on - strand, within BACOVA_03152at 240.450 kb on + strand, within BACOVA_03152at 240.451 kb on - strand, within BACOVA_03152at 240.637 kb on + strand, within BACOVA_03152at 240.637 kb on + strand, within BACOVA_03152at 240.638 kb on - strand, within BACOVA_03152at 240.638 kb on - strand, within BACOVA_03152at 240.674 kb on + strand, within BACOVA_03152at 240.676 kb on + strand, within BACOVA_03152at 240.676 kb on + strand, within BACOVA_03152at 240.677 kb on - strand, within BACOVA_03152at 240.681 kb on + strand, within BACOVA_03152at 240.682 kb on - strand, within BACOVA_03152at 240.682 kb on - strand, within BACOVA_03152at 240.682 kb on - strand, within BACOVA_03152at 240.687 kb on - strand, within BACOVA_03152at 240.687 kb on - strand, within BACOVA_03152at 240.722 kb on - strand, within BACOVA_03152at 240.726 kb on - strand, within BACOVA_03152at 240.726 kb on - strand, within BACOVA_03152at 240.726 kb on - strand, within BACOVA_03152at 240.741 kb on + strand, within BACOVA_03152at 240.741 kb on + strand, within BACOVA_03152at 240.742 kb on - strand, within BACOVA_03152at 240.742 kb on - strand, within BACOVA_03152at 240.747 kb on + strand, within BACOVA_03152at 240.751 kb on - strand, within BACOVA_03152at 240.753 kb on + strand, within BACOVA_03152at 240.754 kb on - strand, within BACOVA_03152at 240.754 kb on - strand, within BACOVA_03152at 240.799 kb on - strand, within BACOVA_03152at 240.799 kb on - strand, within BACOVA_03152at 240.890 kb on - strand, within BACOVA_03152at 240.916 kb on + strandat 240.917 kb on - strandat 240.926 kb on + strandat 240.926 kb on + strandat 240.938 kb on - strandat 240.956 kb on + strandat 240.957 kb on - strandat 240.964 kb on + strandat 240.979 kb on + strandat 240.980 kb on - strandat 240.981 kb on + strandat 240.981 kb on + strandat 240.981 kb on + strandat 240.982 kb on - strandat 240.999 kb on + strandat 241.003 kb on + strandat 241.004 kb on - strandat 241.023 kb on - strandat 241.025 kb on + strandat 241.035 kb on - strandat 241.035 kb on - strandat 241.035 kb on - strandat 241.055 kb on - strandat 241.058 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media
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238,196 - BACOVA_03149 0.56 -0.1
238,219 + BACOVA_03149 0.63 -0.4
238,219 + BACOVA_03149 0.63 +1.1
238,220 - BACOVA_03149 0.64 +0.2
238,250 - BACOVA_03149 0.73 +0.8
238,282 + BACOVA_03149 0.82 +1.1
238,283 - BACOVA_03149 0.83 +0.0
238,283 - BACOVA_03149 0.83 -0.4
238,283 - BACOVA_03149 0.83 -0.6
238,285 - BACOVA_03149 0.83 +2.4
238,286 + BACOVA_03149 0.83 +0.5
238,286 + BACOVA_03149 0.83 +0.1
238,286 + BACOVA_03149 0.83 +0.0
238,286 + BACOVA_03149 0.83 -0.7
238,286 + BACOVA_03149 0.83 -0.8
238,287 - BACOVA_03149 0.84 -2.7
238,287 - BACOVA_03149 0.84 +0.5
238,287 - BACOVA_03149 0.84 +0.3
238,287 - BACOVA_03149 0.84 -0.8
238,287 - BACOVA_03149 0.84 +0.8
238,287 - BACOVA_03149 0.84 -0.1
238,287 - BACOVA_03149 0.84 -1.3
238,299 - BACOVA_03149 0.87 +0.1
238,306 + BACOVA_03149 0.89 +0.7
238,307 - -0.7
238,308 + -0.5
238,309 - +1.9
238,309 - -0.5
238,338 + -1.1
238,338 + +0.1
238,339 - +0.6
238,344 - -1.1
238,349 + -0.8
238,351 + -1.6
238,351 + +0.2
238,351 + +1.8
238,352 - -1.5
238,383 + +1.2
238,457 + -1.2
238,469 + BACOVA_03150 0.10 +0.8
238,469 + BACOVA_03150 0.10 +0.6
238,469 + BACOVA_03150 0.10 -0.5
238,485 - BACOVA_03150 0.12 -0.6
238,547 + BACOVA_03150 0.21 +1.2
238,548 - BACOVA_03150 0.21 +0.5
238,549 + BACOVA_03150 0.21 +0.4
238,582 + BACOVA_03150 0.25 -0.2
238,617 + BACOVA_03150 0.30 -1.3
238,626 + BACOVA_03150 0.31 +0.0
238,627 - BACOVA_03150 0.31 -0.7
238,628 + BACOVA_03150 0.31 -0.5
238,677 - BACOVA_03150 0.38 +0.4
238,691 + BACOVA_03150 0.40 -0.5
238,699 + BACOVA_03150 0.41 +0.3
238,699 + BACOVA_03150 0.41 -0.6
238,699 + BACOVA_03150 0.41 +0.3
238,700 - BACOVA_03150 0.41 +0.3
238,744 + BACOVA_03150 0.47 +0.5
238,744 + BACOVA_03150 0.47 +0.2
238,781 + BACOVA_03150 0.52 -0.9
238,782 - BACOVA_03150 0.52 +0.6
238,783 + BACOVA_03150 0.52 +0.8
238,813 + BACOVA_03150 0.56 +2.4
238,824 + BACOVA_03150 0.58 -0.3
238,825 - BACOVA_03150 0.58 +0.1
238,862 + BACOVA_03150 0.63 -0.4
238,863 - BACOVA_03150 0.63 +2.1
238,865 + BACOVA_03150 0.63 +0.1
238,866 - BACOVA_03150 0.64 -0.5
238,889 + BACOVA_03150 0.67 +0.8
238,890 - BACOVA_03150 0.67 -1.0
238,898 - BACOVA_03150 0.68 -1.0
238,898 - BACOVA_03150 0.68 +0.9
238,898 - BACOVA_03150 0.68 -1.2
238,930 + BACOVA_03150 0.72 -0.7
238,931 - BACOVA_03150 0.72 -0.2
238,941 + BACOVA_03150 0.74 +0.3
238,980 - BACOVA_03150 0.79 -0.1
238,980 - BACOVA_03150 0.79 -0.5
239,060 + BACOVA_03150 0.90 +0.4
239,066 + -0.2
239,066 + -0.9
239,087 + +1.1
239,139 - +0.7
239,155 + -0.4
239,155 + +1.5
239,162 + -0.5
239,162 + -0.3
239,166 + +0.1
239,166 + -0.4
239,167 - -0.9
239,167 - +1.3
239,167 - +0.3
239,167 - +1.4
239,167 - -1.1
239,224 + +0.5
239,262 - +0.3
239,285 + BACOVA_03151 0.11 +0.3
239,288 + BACOVA_03151 0.12 -0.7
239,361 + BACOVA_03151 0.19 -0.5
239,362 - BACOVA_03151 0.19 -0.8
239,362 - BACOVA_03151 0.19 +0.7
239,363 + BACOVA_03151 0.19 -2.0
239,364 - BACOVA_03151 0.19 +0.3
239,378 - BACOVA_03151 0.21 +0.5
239,392 + BACOVA_03151 0.22 -0.6
239,392 + BACOVA_03151 0.22 +0.9
239,412 + BACOVA_03151 0.24 +0.5
239,433 + BACOVA_03151 0.26 -0.8
239,434 - BACOVA_03151 0.26 -0.6
239,485 + BACOVA_03151 0.31 +0.7
239,490 - BACOVA_03151 0.32 -0.2
239,558 + BACOVA_03151 0.39 +1.2
239,568 + BACOVA_03151 0.40 -1.2
239,568 + BACOVA_03151 0.40 +0.5
239,599 + BACOVA_03151 0.43 -0.3
239,600 - BACOVA_03151 0.43 -1.0
239,632 + BACOVA_03151 0.46 +0.3
239,632 + BACOVA_03151 0.46 -1.1
239,632 + BACOVA_03151 0.46 -2.0
239,633 - BACOVA_03151 0.46 -0.8
239,634 + BACOVA_03151 0.46 -0.7
239,684 - BACOVA_03151 0.51 +1.2
239,775 - BACOVA_03151 0.60 -1.3
239,803 + BACOVA_03151 0.63 +3.0
239,846 + BACOVA_03151 0.67 -0.9
239,886 + BACOVA_03151 0.71 +1.4
240,024 - BACOVA_03151 0.85 +0.6
240,040 - BACOVA_03151 0.87 +0.4
240,044 + BACOVA_03151 0.87 +2.8
240,045 - BACOVA_03151 0.87 +1.2
240,045 - BACOVA_03151 0.87 -1.4
240,113 - -0.7
240,122 + +1.4
240,263 - +2.1
240,298 - -1.0
240,302 + -1.3
240,353 - BACOVA_03152 0.16 -0.3
240,357 - BACOVA_03152 0.17 +0.2
240,365 - BACOVA_03152 0.18 +0.3
240,396 + BACOVA_03152 0.22 -0.5
240,396 + BACOVA_03152 0.22 -0.6
240,418 - BACOVA_03152 0.25 +1.7
240,421 + BACOVA_03152 0.25 +0.3
240,424 - BACOVA_03152 0.26 -0.2
240,429 + BACOVA_03152 0.27 +0.7
240,429 + BACOVA_03152 0.27 -0.1
240,442 + BACOVA_03152 0.28 +1.0
240,443 - BACOVA_03152 0.28 +1.6
240,443 - BACOVA_03152 0.28 +0.6
240,450 + BACOVA_03152 0.29 -0.7
240,451 - BACOVA_03152 0.29 -0.3
240,637 + BACOVA_03152 0.54 -2.1
240,637 + BACOVA_03152 0.54 +0.2
240,638 - BACOVA_03152 0.54 +1.8
240,638 - BACOVA_03152 0.54 -1.0
240,674 + BACOVA_03152 0.59 +1.1
240,676 + BACOVA_03152 0.59 -0.6
240,676 + BACOVA_03152 0.59 +0.2
240,677 - BACOVA_03152 0.60 -0.4
240,681 + BACOVA_03152 0.60 +1.5
240,682 - BACOVA_03152 0.60 -0.3
240,682 - BACOVA_03152 0.60 +0.1
240,682 - BACOVA_03152 0.60 -0.2
240,687 - BACOVA_03152 0.61 -2.1
240,687 - BACOVA_03152 0.61 -0.5
240,722 - BACOVA_03152 0.66 -0.5
240,726 - BACOVA_03152 0.66 -0.7
240,726 - BACOVA_03152 0.66 -1.1
240,726 - BACOVA_03152 0.66 -0.0
240,741 + BACOVA_03152 0.68 -2.1
240,741 + BACOVA_03152 0.68 -0.6
240,742 - BACOVA_03152 0.68 +1.0
240,742 - BACOVA_03152 0.68 -0.2
240,747 + BACOVA_03152 0.69 +0.4
240,751 - BACOVA_03152 0.69 -0.2
240,753 + BACOVA_03152 0.70 -1.6
240,754 - BACOVA_03152 0.70 -1.4
240,754 - BACOVA_03152 0.70 +0.0
240,799 - BACOVA_03152 0.76 +0.1
240,799 - BACOVA_03152 0.76 -0.8
240,890 - BACOVA_03152 0.88 +0.5
240,916 + -2.1
240,917 - +1.6
240,926 + -0.8
240,926 + +0.1
240,938 - -0.1
240,956 + -0.6
240,957 - -0.9
240,964 + +1.3
240,979 + +1.1
240,980 - +0.8
240,981 + -0.8
240,981 + +0.9
240,981 + +0.3
240,982 - +0.3
240,999 + +0.5
241,003 + -0.1
241,004 - +0.7
241,023 - -2.1
241,025 + -0.1
241,035 - +0.2
241,035 - +0.0
241,035 - +0.5
241,055 - +0.2
241,058 + +0.6

Or see this region's nucleotide sequence