Experiment: Peptone 2.5 mg/mL (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02798 and BACOVA_02799 are separated by 201 nucleotides BACOVA_02799 and BACOVA_02800 are separated by 208 nucleotides
BACOVA_02798: BACOVA_02798 - arylsulfatase, at 253,702 to 255,255
_02798
BACOVA_02799: BACOVA_02799 - hypothetical protein, at 255,457 to 257,511
_02799
BACOVA_02800: BACOVA_02800 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 257,720 to 261,730
_02800
Position (kb) 255
256
257
258 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 254.525 kb on + strand, within BACOVA_02798 at 254.603 kb on + strand, within BACOVA_02798 at 254.604 kb on - strand, within BACOVA_02798 at 254.604 kb on - strand, within BACOVA_02798 at 254.841 kb on - strand, within BACOVA_02798 at 254.907 kb on + strand, within BACOVA_02798 at 254.927 kb on - strand, within BACOVA_02798 at 254.964 kb on + strand, within BACOVA_02798 at 254.980 kb on + strand, within BACOVA_02798 at 255.053 kb on + strand, within BACOVA_02798 at 255.054 kb on - strand, within BACOVA_02798 at 255.070 kb on + strand, within BACOVA_02798 at 255.070 kb on + strand, within BACOVA_02798 at 255.070 kb on + strand, within BACOVA_02798 at 255.071 kb on - strand, within BACOVA_02798 at 255.162 kb on + strand at 255.163 kb on - strand at 255.165 kb on + strand at 255.175 kb on - strand at 255.220 kb on + strand at 255.221 kb on - strand at 255.283 kb on + strand at 255.338 kb on - strand at 255.374 kb on + strand at 255.375 kb on - strand at 255.384 kb on + strand at 255.385 kb on - strand at 255.385 kb on - strand at 255.469 kb on + strand at 255.469 kb on + strand at 255.469 kb on + strand at 255.470 kb on - strand at 255.527 kb on + strand at 255.600 kb on + strand at 255.600 kb on + strand at 255.601 kb on - strand at 255.601 kb on - strand at 255.643 kb on + strand at 255.644 kb on - strand at 255.670 kb on + strand, within BACOVA_02799 at 255.685 kb on - strand, within BACOVA_02799 at 255.686 kb on + strand, within BACOVA_02799 at 255.687 kb on - strand, within BACOVA_02799 at 255.703 kb on - strand, within BACOVA_02799 at 255.707 kb on + strand, within BACOVA_02799 at 255.743 kb on - strand, within BACOVA_02799 at 255.807 kb on - strand, within BACOVA_02799 at 255.824 kb on - strand, within BACOVA_02799 at 255.829 kb on - strand, within BACOVA_02799 at 255.835 kb on + strand, within BACOVA_02799 at 255.844 kb on - strand, within BACOVA_02799 at 255.975 kb on + strand, within BACOVA_02799 at 255.976 kb on - strand, within BACOVA_02799 at 256.037 kb on + strand, within BACOVA_02799 at 256.038 kb on - strand, within BACOVA_02799 at 256.085 kb on + strand, within BACOVA_02799 at 256.085 kb on + strand, within BACOVA_02799 at 256.233 kb on - strand, within BACOVA_02799 at 256.292 kb on + strand, within BACOVA_02799 at 256.297 kb on + strand, within BACOVA_02799 at 256.371 kb on - strand, within BACOVA_02799 at 256.401 kb on - strand, within BACOVA_02799 at 256.401 kb on - strand, within BACOVA_02799 at 256.401 kb on - strand, within BACOVA_02799 at 256.479 kb on + strand, within BACOVA_02799 at 256.490 kb on + strand, within BACOVA_02799 at 256.490 kb on + strand, within BACOVA_02799 at 256.491 kb on - strand, within BACOVA_02799 at 256.491 kb on - strand, within BACOVA_02799 at 256.560 kb on - strand, within BACOVA_02799 at 256.563 kb on - strand, within BACOVA_02799 at 256.563 kb on - strand, within BACOVA_02799 at 256.628 kb on + strand, within BACOVA_02799 at 256.629 kb on - strand, within BACOVA_02799 at 256.629 kb on - strand, within BACOVA_02799 at 256.780 kb on + strand, within BACOVA_02799 at 256.781 kb on - strand, within BACOVA_02799 at 256.781 kb on - strand, within BACOVA_02799 at 256.811 kb on - strand, within BACOVA_02799 at 256.811 kb on - strand, within BACOVA_02799 at 256.940 kb on - strand, within BACOVA_02799 at 256.946 kb on - strand, within BACOVA_02799 at 256.999 kb on - strand, within BACOVA_02799 at 256.999 kb on - strand, within BACOVA_02799 at 256.999 kb on - strand, within BACOVA_02799 at 257.024 kb on + strand, within BACOVA_02799 at 257.024 kb on + strand, within BACOVA_02799 at 257.093 kb on + strand, within BACOVA_02799 at 257.094 kb on - strand, within BACOVA_02799 at 257.137 kb on - strand, within BACOVA_02799 at 257.137 kb on - strand, within BACOVA_02799 at 257.140 kb on + strand, within BACOVA_02799 at 257.140 kb on + strand, within BACOVA_02799 at 257.148 kb on + strand, within BACOVA_02799 at 257.148 kb on + strand, within BACOVA_02799 at 257.148 kb on + strand, within BACOVA_02799 at 257.149 kb on - strand, within BACOVA_02799 at 257.151 kb on - strand, within BACOVA_02799 at 257.151 kb on - strand, within BACOVA_02799 at 257.151 kb on - strand, within BACOVA_02799 at 257.151 kb on - strand, within BACOVA_02799 at 257.162 kb on + strand, within BACOVA_02799 at 257.163 kb on - strand, within BACOVA_02799 at 257.163 kb on - strand, within BACOVA_02799 at 257.163 kb on - strand, within BACOVA_02799 at 257.295 kb on + strand, within BACOVA_02799 at 257.300 kb on - strand, within BACOVA_02799 at 257.300 kb on - strand, within BACOVA_02799 at 257.300 kb on - strand, within BACOVA_02799 at 257.394 kb on + strand at 257.394 kb on + strand at 257.403 kb on - strand at 257.437 kb on - strand at 257.445 kb on - strand at 257.484 kb on + strand at 257.484 kb on + strand at 257.485 kb on - strand at 257.485 kb on - strand at 257.511 kb on + strand at 257.583 kb on + strand at 257.584 kb on + strand at 257.584 kb on - strand at 257.587 kb on - strand at 257.659 kb on + strand at 257.659 kb on + strand at 257.659 kb on + strand at 257.660 kb on - strand at 257.733 kb on + strand at 257.733 kb on + strand at 257.734 kb on - strand at 257.738 kb on - strand at 257.751 kb on + strand at 257.751 kb on + strand at 257.782 kb on - strand at 257.801 kb on + strand at 257.803 kb on + strand at 257.806 kb on + strand at 257.809 kb on + strand at 257.810 kb on - strand at 257.826 kb on + strand at 257.826 kb on + strand at 257.826 kb on + strand at 257.826 kb on + strand at 257.826 kb on + strand at 257.831 kb on - strand at 257.831 kb on - strand at 257.831 kb on - strand at 257.833 kb on - strand at 257.855 kb on - strand at 257.934 kb on - strand at 257.956 kb on + strand at 257.957 kb on - strand at 258.005 kb on + strand at 258.007 kb on + strand at 258.007 kb on + strand at 258.030 kb on + strand at 258.031 kb on - strand at 258.031 kb on - strand at 258.062 kb on + strand at 258.062 kb on + strand at 258.064 kb on + strand at 258.064 kb on + strand at 258.064 kb on + strand at 258.069 kb on - strand at 258.166 kb on + strand, within BACOVA_02800 at 258.167 kb on - strand, within BACOVA_02800 at 258.167 kb on - strand, within BACOVA_02800 at 258.187 kb on - strand, within BACOVA_02800 at 258.248 kb on + strand, within BACOVA_02800 at 258.249 kb on - strand, within BACOVA_02800 at 258.276 kb on + strand, within BACOVA_02800 at 258.362 kb on - strand, within BACOVA_02800 at 258.409 kb on - strand, within BACOVA_02800 at 258.437 kb on + strand, within BACOVA_02800 at 258.443 kb on - strand, within BACOVA_02800 at 258.444 kb on + strand, within BACOVA_02800 at 258.464 kb on - strand, within BACOVA_02800 at 258.464 kb on - strand, within BACOVA_02800 at 258.464 kb on - strand, within BACOVA_02800
Per-strain Table
Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media remove 254,525 + BACOVA_02798 0.53 -1.1 254,603 + BACOVA_02798 0.58 -0.5 254,604 - BACOVA_02798 0.58 +0.1 254,604 - BACOVA_02798 0.58 +0.9 254,841 - BACOVA_02798 0.73 +0.6 254,907 + BACOVA_02798 0.78 -1.1 254,927 - BACOVA_02798 0.79 +0.6 254,964 + BACOVA_02798 0.81 -0.3 254,980 + BACOVA_02798 0.82 -1.0 255,053 + BACOVA_02798 0.87 +0.1 255,054 - BACOVA_02798 0.87 -1.0 255,070 + BACOVA_02798 0.88 -1.2 255,070 + BACOVA_02798 0.88 +1.2 255,070 + BACOVA_02798 0.88 -0.9 255,071 - BACOVA_02798 0.88 -2.1 255,162 + -2.3 255,163 - -0.4 255,165 + +0.1 255,175 - -0.7 255,220 + -1.2 255,221 - +1.4 255,283 + -0.4 255,338 - +0.0 255,374 + -1.2 255,375 - -0.0 255,384 + -0.1 255,385 - +0.4 255,385 - +0.4 255,469 + +0.5 255,469 + +0.9 255,469 + +0.4 255,470 - -1.8 255,527 + +0.0 255,600 + +0.2 255,600 + +0.7 255,601 - -1.5 255,601 - -1.6 255,643 + +0.2 255,644 - +0.2 255,670 + BACOVA_02799 0.10 +1.0 255,685 - BACOVA_02799 0.11 -2.0 255,686 + BACOVA_02799 0.11 +0.3 255,687 - BACOVA_02799 0.11 +0.5 255,703 - BACOVA_02799 0.12 +0.8 255,707 + BACOVA_02799 0.12 -0.9 255,743 - BACOVA_02799 0.14 -1.3 255,807 - BACOVA_02799 0.17 +1.0 255,824 - BACOVA_02799 0.18 -0.3 255,829 - BACOVA_02799 0.18 +0.3 255,835 + BACOVA_02799 0.18 +0.0 255,844 - BACOVA_02799 0.19 -0.3 255,975 + BACOVA_02799 0.25 -0.6 255,976 - BACOVA_02799 0.25 -1.6 256,037 + BACOVA_02799 0.28 -0.4 256,038 - BACOVA_02799 0.28 +1.1 256,085 + BACOVA_02799 0.31 -0.2 256,085 + BACOVA_02799 0.31 +0.8 256,233 - BACOVA_02799 0.38 -0.9 256,292 + BACOVA_02799 0.41 -0.4 256,297 + BACOVA_02799 0.41 -0.4 256,371 - BACOVA_02799 0.44 -0.3 256,401 - BACOVA_02799 0.46 -0.4 256,401 - BACOVA_02799 0.46 -0.7 256,401 - BACOVA_02799 0.46 -2.6 256,479 + BACOVA_02799 0.50 -0.0 256,490 + BACOVA_02799 0.50 -0.5 256,490 + BACOVA_02799 0.50 +0.1 256,491 - BACOVA_02799 0.50 -0.8 256,491 - BACOVA_02799 0.50 -0.1 256,560 - BACOVA_02799 0.54 -0.0 256,563 - BACOVA_02799 0.54 -1.0 256,563 - BACOVA_02799 0.54 -1.3 256,628 + BACOVA_02799 0.57 -1.8 256,629 - BACOVA_02799 0.57 +0.3 256,629 - BACOVA_02799 0.57 +0.4 256,780 + BACOVA_02799 0.64 +0.4 256,781 - BACOVA_02799 0.64 -1.1 256,781 - BACOVA_02799 0.64 -0.4 256,811 - BACOVA_02799 0.66 -0.5 256,811 - BACOVA_02799 0.66 +0.4 256,940 - BACOVA_02799 0.72 +0.4 256,946 - BACOVA_02799 0.72 +0.8 256,999 - BACOVA_02799 0.75 +0.0 256,999 - BACOVA_02799 0.75 +1.3 256,999 - BACOVA_02799 0.75 +0.2 257,024 + BACOVA_02799 0.76 +1.6 257,024 + BACOVA_02799 0.76 -0.2 257,093 + BACOVA_02799 0.80 -0.4 257,094 - BACOVA_02799 0.80 -0.4 257,137 - BACOVA_02799 0.82 +3.3 257,137 - BACOVA_02799 0.82 -0.4 257,140 + BACOVA_02799 0.82 -1.0 257,140 + BACOVA_02799 0.82 +0.7 257,148 + BACOVA_02799 0.82 -1.0 257,148 + BACOVA_02799 0.82 -1.0 257,148 + BACOVA_02799 0.82 -0.4 257,149 - BACOVA_02799 0.82 -1.0 257,151 - BACOVA_02799 0.82 -0.6 257,151 - BACOVA_02799 0.82 -0.8 257,151 - BACOVA_02799 0.82 -0.3 257,151 - BACOVA_02799 0.82 -0.2 257,162 + BACOVA_02799 0.83 -1.7 257,163 - BACOVA_02799 0.83 +0.2 257,163 - BACOVA_02799 0.83 -0.2 257,163 - BACOVA_02799 0.83 +1.6 257,295 + BACOVA_02799 0.89 +0.7 257,300 - BACOVA_02799 0.90 -1.0 257,300 - BACOVA_02799 0.90 +0.5 257,300 - BACOVA_02799 0.90 -0.4 257,394 + -0.1 257,394 + -2.0 257,403 - +0.3 257,437 - -1.2 257,445 - -0.1 257,484 + -2.2 257,484 + +0.2 257,485 - -0.6 257,485 - -0.7 257,511 + -0.8 257,583 + +1.3 257,584 + +1.5 257,584 - +1.2 257,587 - -1.2 257,659 + -0.6 257,659 + -1.3 257,659 + -1.6 257,660 - +0.6 257,733 + +0.3 257,733 + +1.7 257,734 - -1.8 257,738 - +0.2 257,751 + -1.7 257,751 + +0.9 257,782 - +0.4 257,801 + +0.1 257,803 + -1.4 257,806 + -2.8 257,809 + -0.3 257,810 - -0.4 257,826 + -0.8 257,826 + -0.3 257,826 + -0.1 257,826 + -0.0 257,826 + -0.2 257,831 - -1.3 257,831 - -1.7 257,831 - -1.9 257,833 - -2.1 257,855 - -0.8 257,934 - -0.2 257,956 + +0.6 257,957 - +1.1 258,005 + +0.3 258,007 + +0.0 258,007 + -0.0 258,030 + +0.9 258,031 - +0.6 258,031 - +0.3 258,062 + -0.5 258,062 + -0.1 258,064 + +0.8 258,064 + +0.3 258,064 + +1.9 258,069 - +1.6 258,166 + BACOVA_02800 0.11 -0.5 258,167 - BACOVA_02800 0.11 -1.0 258,167 - BACOVA_02800 0.11 +0.1 258,187 - BACOVA_02800 0.12 -0.1 258,248 + BACOVA_02800 0.13 +0.7 258,249 - BACOVA_02800 0.13 +0.5 258,276 + BACOVA_02800 0.14 -0.2 258,362 - BACOVA_02800 0.16 -0.5 258,409 - BACOVA_02800 0.17 -1.4 258,437 + BACOVA_02800 0.18 -1.0 258,443 - BACOVA_02800 0.18 -0.4 258,444 + BACOVA_02800 0.18 +1.1 258,464 - BACOVA_02800 0.19 -1.2 258,464 - BACOVA_02800 0.19 -0.1 258,464 - BACOVA_02800 0.19 +0.0
Or see this region's nucleotide sequence