Experiment: Peptone 2.5 mg/mL (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02476 and BACOVA_02477 are separated by 68 nucleotides BACOVA_02477 and BACOVA_02478 are separated by 253 nucleotides BACOVA_02478 and BACOVA_02479 are separated by 4 nucleotides BACOVA_02479 and BACOVA_02480 are separated by 0 nucleotides
BACOVA_02476: BACOVA_02476 - putative DNA-binding protein, at 241,605 to 242,129
_02476
BACOVA_02477: BACOVA_02477 - hypothetical protein, at 242,198 to 242,290
_02477
BACOVA_02478: BACOVA_02478 - transglycosylase, at 242,544 to 244,871
_02478
BACOVA_02479: BACOVA_02479 - putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, at 244,876 to 245,262
_02479
BACOVA_02480: BACOVA_02480 - 3-deoxy-D-manno-octulosonate cytidylyltransferase, at 245,263 to 246,015
_02480
Position (kb) 242
243
244
245 Strain fitness (log2 ratio) -2
-1
0
1
2 at 241.567 kb on + strand at 241.604 kb on + strand at 241.605 kb on - strand at 241.618 kb on - strand at 241.664 kb on + strand, within BACOVA_02476 at 241.671 kb on + strand, within BACOVA_02476 at 241.672 kb on - strand, within BACOVA_02476 at 241.674 kb on + strand, within BACOVA_02476 at 241.717 kb on - strand, within BACOVA_02476 at 241.810 kb on + strand, within BACOVA_02476 at 241.853 kb on + strand, within BACOVA_02476 at 241.854 kb on - strand, within BACOVA_02476 at 241.944 kb on - strand, within BACOVA_02476 at 242.014 kb on - strand, within BACOVA_02476 at 242.034 kb on - strand, within BACOVA_02476 at 242.146 kb on - strand at 242.265 kb on + strand, within BACOVA_02477 at 242.265 kb on + strand, within BACOVA_02477 at 242.289 kb on - strand at 242.289 kb on - strand at 242.302 kb on - strand at 242.303 kb on + strand at 242.304 kb on - strand at 242.311 kb on + strand at 242.311 kb on + strand at 242.311 kb on + strand at 242.312 kb on - strand at 242.313 kb on + strand at 242.314 kb on - strand at 242.328 kb on - strand at 242.328 kb on - strand at 242.366 kb on + strand at 242.367 kb on - strand at 242.367 kb on - strand at 242.369 kb on + strand at 242.369 kb on + strand at 242.370 kb on - strand at 242.370 kb on - strand at 242.370 kb on - strand at 242.418 kb on + strand at 242.419 kb on - strand at 242.426 kb on - strand at 242.447 kb on - strand at 242.454 kb on + strand at 242.529 kb on + strand at 245.249 kb on + strand at 245.249 kb on + strand at 245.249 kb on + strand at 245.253 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media remove 241,567 + -0.7 241,604 + +0.1 241,605 - -0.8 241,618 - -0.9 241,664 + BACOVA_02476 0.11 -1.2 241,671 + BACOVA_02476 0.13 -0.9 241,672 - BACOVA_02476 0.13 -0.9 241,674 + BACOVA_02476 0.13 -0.6 241,717 - BACOVA_02476 0.21 +0.2 241,810 + BACOVA_02476 0.39 -0.0 241,853 + BACOVA_02476 0.47 -0.9 241,854 - BACOVA_02476 0.47 -1.9 241,944 - BACOVA_02476 0.65 +0.2 242,014 - BACOVA_02476 0.78 -1.2 242,034 - BACOVA_02476 0.82 -0.3 242,146 - -0.0 242,265 + BACOVA_02477 0.72 -0.3 242,265 + BACOVA_02477 0.72 +0.1 242,289 - -1.4 242,289 - -0.8 242,302 - -0.2 242,303 + -0.1 242,304 - +0.2 242,311 + -2.3 242,311 + +1.4 242,311 + +0.0 242,312 - -0.9 242,313 + +1.3 242,314 - -2.4 242,328 - -0.7 242,328 - +0.4 242,366 + +0.9 242,367 - +0.0 242,367 - -1.1 242,369 + +0.7 242,369 + +0.5 242,370 - +0.1 242,370 - -0.1 242,370 - +0.6 242,418 + -0.0 242,419 - +1.0 242,426 - +0.6 242,447 - -2.0 242,454 + +1.0 242,529 + -0.7 245,249 + +2.1 245,249 + -1.2 245,249 + -1.4 245,253 + +0.1
Or see this region's nucleotide sequence