Experiment: Peptone 2.5 mg/mL (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02405 and BACOVA_02406 are separated by 101 nucleotides BACOVA_02406 and BACOVA_02407 are separated by 33 nucleotides
BACOVA_02405: BACOVA_02405 - hypothetical protein, at 172,530 to 174,047
_02405
BACOVA_02406: BACOVA_02406 - chloramphenicol O-acetyltransferase, at 174,149 to 174,772
_02406
BACOVA_02407: BACOVA_02407 - hypothetical protein, at 174,806 to 176,200
_02407
Position (kb) 174
175 Strain fitness (log2 ratio) -2
-1
0
1
2 at 173.179 kb on + strand, within BACOVA_02405 at 173.206 kb on + strand, within BACOVA_02405 at 173.212 kb on - strand, within BACOVA_02405 at 173.212 kb on - strand, within BACOVA_02405 at 173.212 kb on - strand, within BACOVA_02405 at 173.214 kb on + strand, within BACOVA_02405 at 173.215 kb on - strand, within BACOVA_02405 at 173.363 kb on + strand, within BACOVA_02405 at 173.364 kb on - strand, within BACOVA_02405 at 173.364 kb on - strand, within BACOVA_02405 at 173.364 kb on - strand, within BACOVA_02405 at 173.389 kb on + strand, within BACOVA_02405 at 173.390 kb on - strand, within BACOVA_02405 at 173.420 kb on + strand, within BACOVA_02405 at 173.421 kb on - strand, within BACOVA_02405 at 173.424 kb on + strand, within BACOVA_02405 at 173.425 kb on - strand, within BACOVA_02405 at 173.426 kb on + strand, within BACOVA_02405 at 173.484 kb on - strand, within BACOVA_02405 at 173.501 kb on + strand, within BACOVA_02405 at 173.694 kb on + strand, within BACOVA_02405 at 173.695 kb on - strand, within BACOVA_02405 at 173.831 kb on + strand, within BACOVA_02405 at 173.831 kb on + strand, within BACOVA_02405 at 173.831 kb on + strand, within BACOVA_02405 at 173.832 kb on - strand, within BACOVA_02405 at 173.840 kb on + strand, within BACOVA_02405 at 173.841 kb on - strand, within BACOVA_02405 at 173.859 kb on + strand, within BACOVA_02405 at 173.859 kb on + strand, within BACOVA_02405 at 173.860 kb on - strand, within BACOVA_02405 at 173.863 kb on + strand, within BACOVA_02405 at 174.060 kb on + strand at 174.093 kb on - strand at 174.145 kb on + strand at 174.146 kb on - strand at 174.203 kb on + strand at 174.203 kb on + strand at 174.256 kb on - strand, within BACOVA_02406 at 174.312 kb on + strand, within BACOVA_02406 at 174.379 kb on + strand, within BACOVA_02406 at 174.392 kb on + strand, within BACOVA_02406 at 174.437 kb on - strand, within BACOVA_02406 at 174.735 kb on - strand at 174.752 kb on - strand at 174.770 kb on + strand at 174.800 kb on + strand at 174.803 kb on + strand at 174.804 kb on - strand at 174.804 kb on - strand at 174.805 kb on + strand at 174.805 kb on + strand at 174.805 kb on + strand at 174.806 kb on - strand at 174.806 kb on - strand at 174.806 kb on - strand at 174.806 kb on - strand at 174.813 kb on + strand at 174.814 kb on - strand at 174.820 kb on - strand at 174.934 kb on - strand at 175.044 kb on + strand, within BACOVA_02407 at 175.045 kb on - strand, within BACOVA_02407 at 175.069 kb on - strand, within BACOVA_02407 at 175.103 kb on + strand, within BACOVA_02407 at 175.404 kb on - strand, within BACOVA_02407 at 175.476 kb on - strand, within BACOVA_02407 at 175.604 kb on + strand, within BACOVA_02407 at 175.727 kb on + strand, within BACOVA_02407 at 175.727 kb on + strand, within BACOVA_02407 at 175.728 kb on - strand, within BACOVA_02407 at 175.728 kb on - strand, within BACOVA_02407
Per-strain Table
Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media remove 173,179 + BACOVA_02405 0.43 -0.1 173,206 + BACOVA_02405 0.45 -0.8 173,212 - BACOVA_02405 0.45 -0.2 173,212 - BACOVA_02405 0.45 +0.7 173,212 - BACOVA_02405 0.45 -0.2 173,214 + BACOVA_02405 0.45 +0.2 173,215 - BACOVA_02405 0.45 -0.1 173,363 + BACOVA_02405 0.55 -0.2 173,364 - BACOVA_02405 0.55 +0.3 173,364 - BACOVA_02405 0.55 +0.7 173,364 - BACOVA_02405 0.55 -0.6 173,389 + BACOVA_02405 0.57 -0.2 173,390 - BACOVA_02405 0.57 -0.1 173,420 + BACOVA_02405 0.59 +0.2 173,421 - BACOVA_02405 0.59 -0.3 173,424 + BACOVA_02405 0.59 +1.3 173,425 - BACOVA_02405 0.59 +1.7 173,426 + BACOVA_02405 0.59 -0.2 173,484 - BACOVA_02405 0.63 +0.3 173,501 + BACOVA_02405 0.64 -0.1 173,694 + BACOVA_02405 0.77 +0.7 173,695 - BACOVA_02405 0.77 -1.0 173,831 + BACOVA_02405 0.86 +0.4 173,831 + BACOVA_02405 0.86 +0.5 173,831 + BACOVA_02405 0.86 +0.1 173,832 - BACOVA_02405 0.86 -0.2 173,840 + BACOVA_02405 0.86 -2.3 173,841 - BACOVA_02405 0.86 +0.8 173,859 + BACOVA_02405 0.88 -0.9 173,859 + BACOVA_02405 0.88 +0.4 173,860 - BACOVA_02405 0.88 +1.0 173,863 + BACOVA_02405 0.88 -0.9 174,060 + -1.1 174,093 - +1.7 174,145 + +0.3 174,146 - -0.1 174,203 + +2.1 174,203 + +0.2 174,256 - BACOVA_02406 0.17 +0.1 174,312 + BACOVA_02406 0.26 +0.6 174,379 + BACOVA_02406 0.37 +0.8 174,392 + BACOVA_02406 0.39 +1.9 174,437 - BACOVA_02406 0.46 +0.5 174,735 - -2.1 174,752 - +0.1 174,770 + -0.1 174,800 + -2.0 174,803 + +0.2 174,804 - -1.2 174,804 - -0.6 174,805 + -0.7 174,805 + -0.6 174,805 + +0.5 174,806 - -0.9 174,806 - +0.2 174,806 - -0.7 174,806 - -0.2 174,813 + +0.6 174,814 - -2.2 174,820 - +0.7 174,934 - -0.3 175,044 + BACOVA_02407 0.17 -0.8 175,045 - BACOVA_02407 0.17 +0.4 175,069 - BACOVA_02407 0.19 +1.4 175,103 + BACOVA_02407 0.21 +0.6 175,404 - BACOVA_02407 0.43 +0.3 175,476 - BACOVA_02407 0.48 +1.0 175,604 + BACOVA_02407 0.57 +0.6 175,727 + BACOVA_02407 0.66 +0.9 175,727 + BACOVA_02407 0.66 +1.2 175,728 - BACOVA_02407 0.66 +0.3 175,728 - BACOVA_02407 0.66 -1.3
Or see this region's nucleotide sequence