Experiment: Peptone 2.5 mg/mL (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02296 and BACOVA_02297 overlap by 7 nucleotides BACOVA_02297 and BACOVA_02298 are separated by 18 nucleotides BACOVA_02298 and BACOVA_02299 overlap by 11 nucleotides BACOVA_02299 and BACOVA_02300 are separated by 24 nucleotides
BACOVA_02296: BACOVA_02296 - hypothetical protein, at 65,919 to 67,463
_02296
BACOVA_02297: BACOVA_02297 - hypothetical protein, at 67,457 to 68,197
_02297
BACOVA_02298: BACOVA_02298 - hypothetical protein, at 68,216 to 68,920
_02298
BACOVA_02299: BACOVA_02299 - hypothetical protein, at 68,910 to 69,587
_02299
BACOVA_02300: BACOVA_02300 - hypothetical protein, at 69,612 to 70,739
_02300
Position (kb)
68
69 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 67.254 kb on + strand, within BACOVA_02296 at 67.255 kb on - strand, within BACOVA_02296 at 67.255 kb on - strand, within BACOVA_02296 at 67.282 kb on - strand, within BACOVA_02296 at 67.327 kb on + strand at 67.328 kb on - strand at 67.330 kb on - strand at 67.330 kb on - strand at 67.341 kb on + strand at 67.407 kb on + strand at 67.473 kb on - strand at 67.573 kb on + strand, within BACOVA_02297 at 67.689 kb on - strand, within BACOVA_02297 at 67.737 kb on - strand, within BACOVA_02297 at 67.770 kb on + strand, within BACOVA_02297 at 67.770 kb on + strand, within BACOVA_02297 at 67.795 kb on - strand, within BACOVA_02297 at 67.795 kb on - strand, within BACOVA_02297 at 68.015 kb on + strand, within BACOVA_02297 at 68.018 kb on - strand, within BACOVA_02297 at 68.035 kb on - strand, within BACOVA_02297 at 68.040 kb on - strand, within BACOVA_02297 at 68.193 kb on - strand at 68.232 kb on + strand at 68.232 kb on + strand at 68.242 kb on - strand at 68.248 kb on + strand at 68.298 kb on + strand, within BACOVA_02298 at 68.476 kb on + strand, within BACOVA_02298 at 68.553 kb on - strand, within BACOVA_02298 at 68.564 kb on - strand, within BACOVA_02298 at 68.587 kb on - strand, within BACOVA_02298 at 68.587 kb on - strand, within BACOVA_02298 at 68.613 kb on - strand, within BACOVA_02298 at 68.615 kb on + strand, within BACOVA_02298 at 68.661 kb on - strand, within BACOVA_02298 at 68.661 kb on - strand, within BACOVA_02298 at 68.667 kb on + strand, within BACOVA_02298 at 68.667 kb on + strand, within BACOVA_02298 at 68.670 kb on - strand, within BACOVA_02298 at 68.772 kb on - strand, within BACOVA_02298 at 68.772 kb on - strand, within BACOVA_02298 at 68.835 kb on - strand, within BACOVA_02298 at 68.945 kb on + strand at 68.947 kb on + strand at 69.057 kb on + strand, within BACOVA_02299 at 69.058 kb on - strand, within BACOVA_02299 at 69.060 kb on + strand, within BACOVA_02299 at 69.060 kb on + strand, within BACOVA_02299 at 69.060 kb on + strand, within BACOVA_02299 at 69.060 kb on + strand, within BACOVA_02299 at 69.061 kb on - strand, within BACOVA_02299 at 69.161 kb on - strand, within BACOVA_02299 at 69.244 kb on + strand, within BACOVA_02299 at 69.244 kb on + strand, within BACOVA_02299 at 69.245 kb on - strand, within BACOVA_02299 at 69.303 kb on + strand, within BACOVA_02299 at 69.312 kb on + strand, within BACOVA_02299 at 69.332 kb on + strand, within BACOVA_02299 at 69.363 kb on + strand, within BACOVA_02299 at 69.453 kb on - strand, within BACOVA_02299 at 69.508 kb on - strand, within BACOVA_02299 at 69.582 kb on + strand at 69.585 kb on + strand at 69.594 kb on + strand at 69.611 kb on + strand at 69.619 kb on + strand at 69.623 kb on - strand at 69.627 kb on - strand at 69.640 kb on + strand at 69.641 kb on - strand at 69.641 kb on - strand at 69.641 kb on - strand at 69.778 kb on - strand, within BACOVA_02300 at 69.877 kb on + strand, within BACOVA_02300
Per-strain Table
Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media remove 67,254 + BACOVA_02296 0.86 +0.5 67,255 - BACOVA_02296 0.86 +1.3 67,255 - BACOVA_02296 0.86 +1.6 67,282 - BACOVA_02296 0.88 +0.5 67,327 + -0.8 67,328 - -0.4 67,330 - -1.1 67,330 - +0.1 67,341 + -0.8 67,407 + -2.0 67,473 - -0.2 67,573 + BACOVA_02297 0.16 -0.7 67,689 - BACOVA_02297 0.31 -0.2 67,737 - BACOVA_02297 0.38 -0.2 67,770 + BACOVA_02297 0.42 -1.1 67,770 + BACOVA_02297 0.42 -2.3 67,795 - BACOVA_02297 0.46 +0.4 67,795 - BACOVA_02297 0.46 -0.9 68,015 + BACOVA_02297 0.75 -0.3 68,018 - BACOVA_02297 0.76 -0.7 68,035 - BACOVA_02297 0.78 +0.4 68,040 - BACOVA_02297 0.79 +1.2 68,193 - +1.1 68,232 + +0.6 68,232 + -0.9 68,242 - +0.6 68,248 + +0.2 68,298 + BACOVA_02298 0.12 -1.3 68,476 + BACOVA_02298 0.37 -0.4 68,553 - BACOVA_02298 0.48 +0.9 68,564 - BACOVA_02298 0.49 -0.4 68,587 - BACOVA_02298 0.53 +0.1 68,587 - BACOVA_02298 0.53 +1.1 68,613 - BACOVA_02298 0.56 +1.0 68,615 + BACOVA_02298 0.57 -1.1 68,661 - BACOVA_02298 0.63 +0.7 68,661 - BACOVA_02298 0.63 -1.9 68,667 + BACOVA_02298 0.64 -0.4 68,667 + BACOVA_02298 0.64 -0.4 68,670 - BACOVA_02298 0.64 +1.0 68,772 - BACOVA_02298 0.79 -1.6 68,772 - BACOVA_02298 0.79 +1.0 68,835 - BACOVA_02298 0.88 +1.6 68,945 + -1.4 68,947 + -2.7 69,057 + BACOVA_02299 0.22 +1.4 69,058 - BACOVA_02299 0.22 -1.0 69,060 + BACOVA_02299 0.22 -1.1 69,060 + BACOVA_02299 0.22 -0.4 69,060 + BACOVA_02299 0.22 -0.5 69,060 + BACOVA_02299 0.22 -2.8 69,061 - BACOVA_02299 0.22 +1.6 69,161 - BACOVA_02299 0.37 -0.6 69,244 + BACOVA_02299 0.49 -1.2 69,244 + BACOVA_02299 0.49 -2.0 69,245 - BACOVA_02299 0.49 +1.4 69,303 + BACOVA_02299 0.58 -0.8 69,312 + BACOVA_02299 0.59 -0.9 69,332 + BACOVA_02299 0.62 -0.4 69,363 + BACOVA_02299 0.67 -0.3 69,453 - BACOVA_02299 0.80 +1.1 69,508 - BACOVA_02299 0.88 +1.0 69,582 + -1.6 69,585 + +1.6 69,594 + -1.4 69,611 + -0.4 69,619 + +1.6 69,623 - -0.4 69,627 - -1.0 69,640 + +1.2 69,641 - +0.6 69,641 - +0.7 69,641 - +0.6 69,778 - BACOVA_02300 0.15 -0.2 69,877 + BACOVA_02300 0.23 +0.4
Or see this region's nucleotide sequence