Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02298

Experiment: Peptone 2.5 mg/mL (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02296 and BACOVA_02297 overlap by 7 nucleotidesBACOVA_02297 and BACOVA_02298 are separated by 18 nucleotidesBACOVA_02298 and BACOVA_02299 overlap by 11 nucleotidesBACOVA_02299 and BACOVA_02300 are separated by 24 nucleotides BACOVA_02296: BACOVA_02296 - hypothetical protein, at 65,919 to 67,463 _02296 BACOVA_02297: BACOVA_02297 - hypothetical protein, at 67,457 to 68,197 _02297 BACOVA_02298: BACOVA_02298 - hypothetical protein, at 68,216 to 68,920 _02298 BACOVA_02299: BACOVA_02299 - hypothetical protein, at 68,910 to 69,587 _02299 BACOVA_02300: BACOVA_02300 - hypothetical protein, at 69,612 to 70,739 _02300 Position (kb) 68 69Strain fitness (log2 ratio) -3 -2 -1 0 1at 67.254 kb on + strand, within BACOVA_02296at 67.255 kb on - strand, within BACOVA_02296at 67.255 kb on - strand, within BACOVA_02296at 67.282 kb on - strand, within BACOVA_02296at 67.327 kb on + strandat 67.328 kb on - strandat 67.330 kb on - strandat 67.330 kb on - strandat 67.341 kb on + strandat 67.407 kb on + strandat 67.473 kb on - strandat 67.573 kb on + strand, within BACOVA_02297at 67.689 kb on - strand, within BACOVA_02297at 67.737 kb on - strand, within BACOVA_02297at 67.770 kb on + strand, within BACOVA_02297at 67.770 kb on + strand, within BACOVA_02297at 67.795 kb on - strand, within BACOVA_02297at 67.795 kb on - strand, within BACOVA_02297at 68.015 kb on + strand, within BACOVA_02297at 68.018 kb on - strand, within BACOVA_02297at 68.035 kb on - strand, within BACOVA_02297at 68.040 kb on - strand, within BACOVA_02297at 68.193 kb on - strandat 68.232 kb on + strandat 68.232 kb on + strandat 68.242 kb on - strandat 68.248 kb on + strandat 68.298 kb on + strand, within BACOVA_02298at 68.476 kb on + strand, within BACOVA_02298at 68.553 kb on - strand, within BACOVA_02298at 68.564 kb on - strand, within BACOVA_02298at 68.587 kb on - strand, within BACOVA_02298at 68.587 kb on - strand, within BACOVA_02298at 68.613 kb on - strand, within BACOVA_02298at 68.615 kb on + strand, within BACOVA_02298at 68.661 kb on - strand, within BACOVA_02298at 68.661 kb on - strand, within BACOVA_02298at 68.667 kb on + strand, within BACOVA_02298at 68.667 kb on + strand, within BACOVA_02298at 68.670 kb on - strand, within BACOVA_02298at 68.772 kb on - strand, within BACOVA_02298at 68.772 kb on - strand, within BACOVA_02298at 68.835 kb on - strand, within BACOVA_02298at 68.945 kb on + strandat 68.947 kb on + strandat 69.057 kb on + strand, within BACOVA_02299at 69.058 kb on - strand, within BACOVA_02299at 69.060 kb on + strand, within BACOVA_02299at 69.060 kb on + strand, within BACOVA_02299at 69.060 kb on + strand, within BACOVA_02299at 69.060 kb on + strand, within BACOVA_02299at 69.061 kb on - strand, within BACOVA_02299at 69.161 kb on - strand, within BACOVA_02299at 69.244 kb on + strand, within BACOVA_02299at 69.244 kb on + strand, within BACOVA_02299at 69.245 kb on - strand, within BACOVA_02299at 69.303 kb on + strand, within BACOVA_02299at 69.312 kb on + strand, within BACOVA_02299at 69.332 kb on + strand, within BACOVA_02299at 69.363 kb on + strand, within BACOVA_02299at 69.453 kb on - strand, within BACOVA_02299at 69.508 kb on - strand, within BACOVA_02299at 69.582 kb on + strandat 69.585 kb on + strandat 69.594 kb on + strandat 69.611 kb on + strandat 69.619 kb on + strandat 69.623 kb on - strandat 69.627 kb on - strandat 69.640 kb on + strandat 69.641 kb on - strandat 69.641 kb on - strandat 69.641 kb on - strandat 69.778 kb on - strand, within BACOVA_02300at 69.877 kb on + strand, within BACOVA_02300

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Per-strain Table

Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media
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67,254 + BACOVA_02296 0.86 +0.5
67,255 - BACOVA_02296 0.86 +1.3
67,255 - BACOVA_02296 0.86 +1.6
67,282 - BACOVA_02296 0.88 +0.5
67,327 + -0.8
67,328 - -0.4
67,330 - -1.1
67,330 - +0.1
67,341 + -0.8
67,407 + -2.0
67,473 - -0.2
67,573 + BACOVA_02297 0.16 -0.7
67,689 - BACOVA_02297 0.31 -0.2
67,737 - BACOVA_02297 0.38 -0.2
67,770 + BACOVA_02297 0.42 -1.1
67,770 + BACOVA_02297 0.42 -2.3
67,795 - BACOVA_02297 0.46 +0.4
67,795 - BACOVA_02297 0.46 -0.9
68,015 + BACOVA_02297 0.75 -0.3
68,018 - BACOVA_02297 0.76 -0.7
68,035 - BACOVA_02297 0.78 +0.4
68,040 - BACOVA_02297 0.79 +1.2
68,193 - +1.1
68,232 + +0.6
68,232 + -0.9
68,242 - +0.6
68,248 + +0.2
68,298 + BACOVA_02298 0.12 -1.3
68,476 + BACOVA_02298 0.37 -0.4
68,553 - BACOVA_02298 0.48 +0.9
68,564 - BACOVA_02298 0.49 -0.4
68,587 - BACOVA_02298 0.53 +0.1
68,587 - BACOVA_02298 0.53 +1.1
68,613 - BACOVA_02298 0.56 +1.0
68,615 + BACOVA_02298 0.57 -1.1
68,661 - BACOVA_02298 0.63 +0.7
68,661 - BACOVA_02298 0.63 -1.9
68,667 + BACOVA_02298 0.64 -0.4
68,667 + BACOVA_02298 0.64 -0.4
68,670 - BACOVA_02298 0.64 +1.0
68,772 - BACOVA_02298 0.79 -1.6
68,772 - BACOVA_02298 0.79 +1.0
68,835 - BACOVA_02298 0.88 +1.6
68,945 + -1.4
68,947 + -2.7
69,057 + BACOVA_02299 0.22 +1.4
69,058 - BACOVA_02299 0.22 -1.0
69,060 + BACOVA_02299 0.22 -1.1
69,060 + BACOVA_02299 0.22 -0.4
69,060 + BACOVA_02299 0.22 -0.5
69,060 + BACOVA_02299 0.22 -2.8
69,061 - BACOVA_02299 0.22 +1.6
69,161 - BACOVA_02299 0.37 -0.6
69,244 + BACOVA_02299 0.49 -1.2
69,244 + BACOVA_02299 0.49 -2.0
69,245 - BACOVA_02299 0.49 +1.4
69,303 + BACOVA_02299 0.58 -0.8
69,312 + BACOVA_02299 0.59 -0.9
69,332 + BACOVA_02299 0.62 -0.4
69,363 + BACOVA_02299 0.67 -0.3
69,453 - BACOVA_02299 0.80 +1.1
69,508 - BACOVA_02299 0.88 +1.0
69,582 + -1.6
69,585 + +1.6
69,594 + -1.4
69,611 + -0.4
69,619 + +1.6
69,623 - -0.4
69,627 - -1.0
69,640 + +1.2
69,641 - +0.6
69,641 - +0.7
69,641 - +0.6
69,778 - BACOVA_02300 0.15 -0.2
69,877 + BACOVA_02300 0.23 +0.4

Or see this region's nucleotide sequence