Experiment: Peptone 2.5 mg/mL (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02065 and BACOVA_02066 are separated by 187 nucleotides BACOVA_02066 and BACOVA_02067 are separated by 250 nucleotides
BACOVA_02065: BACOVA_02065 - response regulator receiver domain protein, at 381,936 to 385,883
_02065
BACOVA_02066: BACOVA_02066 - hypothetical protein, at 386,071 to 386,778
_02066
BACOVA_02067: BACOVA_02067 - alkyl hydroperoxide reductase, F subunit, at 387,029 to 388,579
_02067
Position (kb) 386
387 Strain fitness (log2 ratio) -2
-1
0
1
2 at 385.097 kb on - strand, within BACOVA_02065 at 385.121 kb on - strand, within BACOVA_02065 at 385.121 kb on - strand, within BACOVA_02065 at 385.163 kb on + strand, within BACOVA_02065 at 385.185 kb on + strand, within BACOVA_02065 at 385.186 kb on - strand, within BACOVA_02065 at 385.186 kb on - strand, within BACOVA_02065 at 385.208 kb on - strand, within BACOVA_02065 at 385.220 kb on + strand, within BACOVA_02065 at 385.223 kb on + strand, within BACOVA_02065 at 385.244 kb on + strand, within BACOVA_02065 at 385.246 kb on + strand, within BACOVA_02065 at 385.250 kb on - strand, within BACOVA_02065 at 385.250 kb on - strand, within BACOVA_02065 at 385.259 kb on - strand, within BACOVA_02065 at 385.282 kb on - strand, within BACOVA_02065 at 385.288 kb on + strand, within BACOVA_02065 at 385.316 kb on + strand, within BACOVA_02065 at 385.325 kb on + strand, within BACOVA_02065 at 385.375 kb on + strand, within BACOVA_02065 at 385.376 kb on - strand, within BACOVA_02065 at 385.376 kb on - strand, within BACOVA_02065 at 385.402 kb on - strand, within BACOVA_02065 at 385.471 kb on - strand, within BACOVA_02065 at 385.551 kb on - strand at 385.620 kb on - strand at 385.648 kb on + strand at 385.648 kb on + strand at 385.648 kb on + strand at 385.649 kb on - strand at 385.649 kb on - strand at 385.649 kb on - strand at 385.649 kb on - strand at 385.650 kb on + strand at 385.650 kb on + strand at 385.651 kb on - strand at 385.652 kb on + strand at 385.653 kb on - strand at 385.656 kb on - strand at 385.656 kb on - strand at 385.693 kb on - strand at 385.695 kb on - strand at 385.733 kb on - strand at 385.785 kb on + strand at 385.785 kb on + strand at 385.807 kb on + strand at 385.812 kb on - strand at 385.895 kb on + strand at 385.895 kb on + strand at 385.907 kb on + strand at 385.909 kb on + strand at 385.912 kb on - strand at 385.919 kb on - strand at 386.000 kb on + strand at 386.001 kb on - strand at 386.058 kb on - strand at 386.067 kb on + strand at 386.067 kb on + strand at 386.080 kb on + strand at 386.087 kb on + strand at 386.087 kb on + strand at 386.087 kb on + strand at 386.096 kb on + strand at 386.099 kb on + strand at 386.099 kb on + strand at 386.099 kb on + strand at 386.244 kb on - strand, within BACOVA_02066 at 386.246 kb on + strand, within BACOVA_02066 at 386.246 kb on + strand, within BACOVA_02066 at 386.257 kb on + strand, within BACOVA_02066 at 386.312 kb on + strand, within BACOVA_02066 at 386.313 kb on - strand, within BACOVA_02066 at 386.325 kb on + strand, within BACOVA_02066 at 386.326 kb on - strand, within BACOVA_02066 at 386.338 kb on + strand, within BACOVA_02066 at 386.339 kb on - strand, within BACOVA_02066 at 386.339 kb on - strand, within BACOVA_02066 at 386.339 kb on - strand, within BACOVA_02066 at 386.339 kb on - strand, within BACOVA_02066 at 386.340 kb on + strand, within BACOVA_02066 at 386.385 kb on + strand, within BACOVA_02066 at 386.405 kb on - strand, within BACOVA_02066 at 386.448 kb on + strand, within BACOVA_02066 at 386.501 kb on - strand, within BACOVA_02066 at 386.501 kb on - strand, within BACOVA_02066 at 386.501 kb on - strand, within BACOVA_02066 at 386.503 kb on - strand, within BACOVA_02066 at 386.518 kb on + strand, within BACOVA_02066 at 386.518 kb on + strand, within BACOVA_02066 at 386.586 kb on - strand, within BACOVA_02066 at 386.600 kb on + strand, within BACOVA_02066 at 386.600 kb on - strand, within BACOVA_02066 at 386.603 kb on - strand, within BACOVA_02066 at 386.603 kb on - strand, within BACOVA_02066 at 386.618 kb on + strand, within BACOVA_02066 at 386.619 kb on - strand, within BACOVA_02066 at 386.691 kb on - strand, within BACOVA_02066 at 386.762 kb on - strand at 386.762 kb on - strand at 386.763 kb on + strand at 386.763 kb on + strand at 386.763 kb on + strand at 386.763 kb on + strand at 386.763 kb on + strand at 386.764 kb on - strand at 386.767 kb on + strand at 386.767 kb on + strand at 386.767 kb on + strand at 386.768 kb on - strand at 386.768 kb on - strand at 386.768 kb on - strand at 386.780 kb on + strand at 386.804 kb on + strand at 386.805 kb on - strand at 386.821 kb on - strand at 386.821 kb on - strand at 386.917 kb on + strand at 386.921 kb on + strand at 386.929 kb on - strand at 386.949 kb on - strand at 386.957 kb on + strand at 386.974 kb on - strand at 386.974 kb on - strand at 386.974 kb on - strand at 386.988 kb on + strand at 387.000 kb on + strand at 387.001 kb on - strand at 387.014 kb on - strand at 387.021 kb on + strand at 387.035 kb on - strand at 387.092 kb on - strand at 387.097 kb on + strand at 387.097 kb on + strand at 387.109 kb on + strand at 387.110 kb on - strand at 387.111 kb on + strand at 387.111 kb on + strand at 387.111 kb on + strand at 387.112 kb on - strand at 387.112 kb on - strand at 387.112 kb on - strand at 387.112 kb on - strand at 387.121 kb on + strand at 387.141 kb on + strand at 387.141 kb on + strand at 387.141 kb on + strand at 387.146 kb on - strand at 387.221 kb on + strand, within BACOVA_02067 at 387.229 kb on + strand, within BACOVA_02067 at 387.257 kb on + strand, within BACOVA_02067 at 387.257 kb on + strand, within BACOVA_02067 at 387.258 kb on - strand, within BACOVA_02067 at 387.258 kb on - strand, within BACOVA_02067 at 387.326 kb on - strand, within BACOVA_02067 at 387.326 kb on - strand, within BACOVA_02067 at 387.338 kb on + strand, within BACOVA_02067 at 387.338 kb on + strand, within BACOVA_02067 at 387.463 kb on + strand, within BACOVA_02067 at 387.509 kb on + strand, within BACOVA_02067 at 387.510 kb on - strand, within BACOVA_02067 at 387.510 kb on - strand, within BACOVA_02067 at 387.518 kb on + strand, within BACOVA_02067 at 387.519 kb on - strand, within BACOVA_02067 at 387.519 kb on - strand, within BACOVA_02067 at 387.581 kb on - strand, within BACOVA_02067 at 387.605 kb on - strand, within BACOVA_02067 at 387.674 kb on - strand, within BACOVA_02067 at 387.674 kb on - strand, within BACOVA_02067 at 387.714 kb on - strand, within BACOVA_02067 at 387.718 kb on + strand, within BACOVA_02067 at 387.719 kb on - strand, within BACOVA_02067
Per-strain Table
Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media remove 385,097 - BACOVA_02065 0.80 +0.2 385,121 - BACOVA_02065 0.81 +1.0 385,121 - BACOVA_02065 0.81 +1.2 385,163 + BACOVA_02065 0.82 -0.9 385,185 + BACOVA_02065 0.82 -0.1 385,186 - BACOVA_02065 0.82 +0.3 385,186 - BACOVA_02065 0.82 -0.3 385,208 - BACOVA_02065 0.83 +1.0 385,220 + BACOVA_02065 0.83 +1.5 385,223 + BACOVA_02065 0.83 -0.2 385,244 + BACOVA_02065 0.84 -0.0 385,246 + BACOVA_02065 0.84 +0.6 385,250 - BACOVA_02065 0.84 +0.8 385,250 - BACOVA_02065 0.84 -0.0 385,259 - BACOVA_02065 0.84 +0.1 385,282 - BACOVA_02065 0.85 -0.5 385,288 + BACOVA_02065 0.85 -0.2 385,316 + BACOVA_02065 0.86 -2.0 385,325 + BACOVA_02065 0.86 +0.9 385,375 + BACOVA_02065 0.87 -0.1 385,376 - BACOVA_02065 0.87 +0.2 385,376 - BACOVA_02065 0.87 +0.9 385,402 - BACOVA_02065 0.88 -0.2 385,471 - BACOVA_02065 0.90 +1.5 385,551 - +0.1 385,620 - -1.5 385,648 + -2.1 385,648 + +0.3 385,648 + +0.1 385,649 - -0.7 385,649 - -0.5 385,649 - -0.1 385,649 - +0.1 385,650 + -0.6 385,650 + -1.4 385,651 - -0.9 385,652 + -0.3 385,653 - +1.0 385,656 - -2.5 385,656 - -1.8 385,693 - -1.3 385,695 - -0.4 385,733 - -1.5 385,785 + -1.8 385,785 + -1.6 385,807 + -0.2 385,812 - +0.1 385,895 + +1.3 385,895 + -1.2 385,907 + -1.0 385,909 + -0.9 385,912 - -1.5 385,919 - -0.7 386,000 + +0.7 386,001 - -0.6 386,058 - -0.8 386,067 + -0.3 386,067 + -0.0 386,080 + +0.5 386,087 + +0.5 386,087 + +1.1 386,087 + +0.9 386,096 + -0.2 386,099 + +0.8 386,099 + +0.5 386,099 + +0.7 386,244 - BACOVA_02066 0.24 +2.6 386,246 + BACOVA_02066 0.25 +0.5 386,246 + BACOVA_02066 0.25 +0.3 386,257 + BACOVA_02066 0.26 +1.5 386,312 + BACOVA_02066 0.34 -2.5 386,313 - BACOVA_02066 0.34 -0.2 386,325 + BACOVA_02066 0.36 -0.8 386,326 - BACOVA_02066 0.36 +0.1 386,338 + BACOVA_02066 0.38 -0.8 386,339 - BACOVA_02066 0.38 -1.5 386,339 - BACOVA_02066 0.38 -0.4 386,339 - BACOVA_02066 0.38 +0.9 386,339 - BACOVA_02066 0.38 +0.8 386,340 + BACOVA_02066 0.38 +0.9 386,385 + BACOVA_02066 0.44 +0.0 386,405 - BACOVA_02066 0.47 -1.1 386,448 + BACOVA_02066 0.53 -2.5 386,501 - BACOVA_02066 0.61 -0.1 386,501 - BACOVA_02066 0.61 +0.4 386,501 - BACOVA_02066 0.61 +1.0 386,503 - BACOVA_02066 0.61 +0.3 386,518 + BACOVA_02066 0.63 +0.6 386,518 + BACOVA_02066 0.63 +1.1 386,586 - BACOVA_02066 0.73 +0.3 386,600 + BACOVA_02066 0.75 -0.6 386,600 - BACOVA_02066 0.75 +0.7 386,603 - BACOVA_02066 0.75 -1.3 386,603 - BACOVA_02066 0.75 +0.8 386,618 + BACOVA_02066 0.77 +0.9 386,619 - BACOVA_02066 0.77 +0.6 386,691 - BACOVA_02066 0.88 -0.0 386,762 - +0.5 386,762 - +0.6 386,763 + +1.3 386,763 + -1.5 386,763 + +0.7 386,763 + -0.5 386,763 + -1.5 386,764 - -0.5 386,767 + +0.0 386,767 + +0.7 386,767 + +0.2 386,768 - -0.2 386,768 - +0.6 386,768 - +0.1 386,780 + -0.9 386,804 + +0.5 386,805 - -0.3 386,821 - -0.4 386,821 - -0.7 386,917 + +1.2 386,921 + +0.6 386,929 - -1.0 386,949 - -1.6 386,957 + -0.3 386,974 - -1.6 386,974 - +0.1 386,974 - +0.2 386,988 + +0.4 387,000 + -0.2 387,001 - -0.9 387,014 - +0.2 387,021 + +0.3 387,035 - -1.6 387,092 - +1.3 387,097 + -0.6 387,097 + +0.3 387,109 + -1.8 387,110 - -1.4 387,111 + -0.6 387,111 + +0.2 387,111 + +0.6 387,112 - -0.4 387,112 - -0.4 387,112 - +0.1 387,112 - +0.7 387,121 + -1.1 387,141 + +0.8 387,141 + -0.8 387,141 + +0.1 387,146 - -1.4 387,221 + BACOVA_02067 0.12 -0.9 387,229 + BACOVA_02067 0.13 +0.0 387,257 + BACOVA_02067 0.15 +0.8 387,257 + BACOVA_02067 0.15 -0.5 387,258 - BACOVA_02067 0.15 -1.2 387,258 - BACOVA_02067 0.15 -0.5 387,326 - BACOVA_02067 0.19 -0.3 387,326 - BACOVA_02067 0.19 -2.0 387,338 + BACOVA_02067 0.20 -0.6 387,338 + BACOVA_02067 0.20 -0.0 387,463 + BACOVA_02067 0.28 -0.1 387,509 + BACOVA_02067 0.31 -0.3 387,510 - BACOVA_02067 0.31 +0.9 387,510 - BACOVA_02067 0.31 -1.9 387,518 + BACOVA_02067 0.32 -0.3 387,519 - BACOVA_02067 0.32 -0.0 387,519 - BACOVA_02067 0.32 -0.5 387,581 - BACOVA_02067 0.36 +0.3 387,605 - BACOVA_02067 0.37 -2.2 387,674 - BACOVA_02067 0.42 -0.8 387,674 - BACOVA_02067 0.42 +0.2 387,714 - BACOVA_02067 0.44 -0.3 387,718 + BACOVA_02067 0.44 +0.6 387,719 - BACOVA_02067 0.44 -0.6
Or see this region's nucleotide sequence