Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00762

Experiment: Peptone 2.5 mg/mL (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00761 and BACOVA_00762 are separated by 50 nucleotidesBACOVA_00762 and BACOVA_00763 overlap by 30 nucleotidesBACOVA_00763 and BACOVA_00764 are separated by 13 nucleotides BACOVA_00761: BACOVA_00761 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 439,819 to 443,805 _00761 BACOVA_00762: BACOVA_00762 - hypothetical protein, at 443,856 to 443,966 _00762 BACOVA_00763: BACOVA_00763 - hypothetical protein, at 443,937 to 444,449 _00763 BACOVA_00764: BACOVA_00764 - TonB-dependent receptor, at 444,463 to 446,295 _00764 Position (kb) 443 444Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 442.887 kb on + strand, within BACOVA_00761at 442.888 kb on - strand, within BACOVA_00761at 442.989 kb on - strand, within BACOVA_00761at 443.040 kb on - strand, within BACOVA_00761at 443.047 kb on + strand, within BACOVA_00761at 443.048 kb on - strand, within BACOVA_00761at 443.048 kb on - strand, within BACOVA_00761at 443.048 kb on - strand, within BACOVA_00761at 443.070 kb on + strand, within BACOVA_00761at 443.071 kb on - strand, within BACOVA_00761at 443.072 kb on + strand, within BACOVA_00761at 443.073 kb on - strand, within BACOVA_00761at 443.073 kb on - strand, within BACOVA_00761at 443.076 kb on + strand, within BACOVA_00761at 443.076 kb on + strand, within BACOVA_00761at 443.082 kb on - strand, within BACOVA_00761at 443.116 kb on - strand, within BACOVA_00761at 443.128 kb on + strand, within BACOVA_00761at 443.340 kb on + strand, within BACOVA_00761at 443.346 kb on + strand, within BACOVA_00761at 443.383 kb on + strand, within BACOVA_00761at 443.383 kb on + strand, within BACOVA_00761at 443.436 kb on + strandat 443.436 kb on + strandat 443.459 kb on + strandat 443.468 kb on + strandat 443.468 kb on + strandat 443.557 kb on + strandat 443.653 kb on + strandat 443.731 kb on - strandat 443.755 kb on - strandat 443.821 kb on + strandat 443.825 kb on + strandat 443.832 kb on + strandat 443.833 kb on - strandat 443.856 kb on - strandat 443.865 kb on + strandat 443.865 kb on + strandat 443.865 kb on + strandat 443.865 kb on + strandat 443.866 kb on - strandat 443.866 kb on - strandat 443.866 kb on - strandat 443.898 kb on - strand, within BACOVA_00762at 443.929 kb on + strand, within BACOVA_00762at 443.953 kb on + strandat 443.965 kb on - strandat 443.968 kb on + strandat 443.969 kb on - strandat 443.980 kb on - strandat 444.043 kb on - strand, within BACOVA_00763at 444.043 kb on - strand, within BACOVA_00763at 444.044 kb on + strand, within BACOVA_00763at 444.046 kb on + strand, within BACOVA_00763at 444.047 kb on - strand, within BACOVA_00763at 444.047 kb on - strand, within BACOVA_00763at 444.047 kb on - strand, within BACOVA_00763at 444.080 kb on - strand, within BACOVA_00763at 444.080 kb on - strand, within BACOVA_00763at 444.083 kb on + strand, within BACOVA_00763at 444.084 kb on - strand, within BACOVA_00763at 444.162 kb on + strand, within BACOVA_00763at 444.171 kb on + strand, within BACOVA_00763at 444.271 kb on + strand, within BACOVA_00763at 444.275 kb on + strand, within BACOVA_00763at 444.275 kb on + strand, within BACOVA_00763at 444.276 kb on - strand, within BACOVA_00763at 444.302 kb on - strand, within BACOVA_00763at 444.305 kb on + strand, within BACOVA_00763at 444.305 kb on + strand, within BACOVA_00763at 444.432 kb on + strandat 444.433 kb on - strandat 444.438 kb on - strandat 444.449 kb on + strandat 444.458 kb on - strandat 444.460 kb on + strandat 444.490 kb on - strandat 444.560 kb on - strandat 444.672 kb on - strand, within BACOVA_00764at 444.676 kb on + strand, within BACOVA_00764at 444.677 kb on - strand, within BACOVA_00764at 444.689 kb on - strand, within BACOVA_00764at 444.691 kb on - strand, within BACOVA_00764at 444.779 kb on + strand, within BACOVA_00764at 444.780 kb on - strand, within BACOVA_00764at 444.815 kb on + strand, within BACOVA_00764at 444.821 kb on - strand, within BACOVA_00764at 444.822 kb on + strand, within BACOVA_00764at 444.848 kb on - strand, within BACOVA_00764at 444.864 kb on + strand, within BACOVA_00764at 444.916 kb on - strand, within BACOVA_00764at 444.917 kb on + strand, within BACOVA_00764at 444.918 kb on - strand, within BACOVA_00764at 444.920 kb on + strand, within BACOVA_00764

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Per-strain Table

Position Strand Gene LocusTag Fraction Peptone 2.5 mg/mL (C) complex media
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442,887 + BACOVA_00761 0.77 -1.7
442,888 - BACOVA_00761 0.77 +0.7
442,989 - BACOVA_00761 0.80 +1.7
443,040 - BACOVA_00761 0.81 -0.4
443,047 + BACOVA_00761 0.81 -0.7
443,048 - BACOVA_00761 0.81 -1.3
443,048 - BACOVA_00761 0.81 -0.9
443,048 - BACOVA_00761 0.81 -0.4
443,070 + BACOVA_00761 0.82 -0.4
443,071 - BACOVA_00761 0.82 -1.1
443,072 + BACOVA_00761 0.82 -2.3
443,073 - BACOVA_00761 0.82 -1.1
443,073 - BACOVA_00761 0.82 -1.0
443,076 + BACOVA_00761 0.82 +0.3
443,076 + BACOVA_00761 0.82 +1.1
443,082 - BACOVA_00761 0.82 +0.2
443,116 - BACOVA_00761 0.83 -0.7
443,128 + BACOVA_00761 0.83 +0.2
443,340 + BACOVA_00761 0.88 +0.2
443,346 + BACOVA_00761 0.88 -2.5
443,383 + BACOVA_00761 0.89 +0.8
443,383 + BACOVA_00761 0.89 -2.5
443,436 + +0.5
443,436 + -0.9
443,459 + +0.2
443,468 + -1.7
443,468 + -0.7
443,557 + -1.0
443,653 + -0.6
443,731 - +0.3
443,755 - -0.4
443,821 + -1.1
443,825 + -0.3
443,832 + +0.3
443,833 - +0.3
443,856 - -2.4
443,865 + +1.9
443,865 + -0.4
443,865 + -0.4
443,865 + +0.3
443,866 - -1.4
443,866 - -0.7
443,866 - -0.4
443,898 - BACOVA_00762 0.38 -2.9
443,929 + BACOVA_00762 0.66 -0.7
443,953 + -0.9
443,965 - +0.6
443,968 + -0.1
443,969 - +0.4
443,980 - -1.3
444,043 - BACOVA_00763 0.21 -0.7
444,043 - BACOVA_00763 0.21 +0.9
444,044 + BACOVA_00763 0.21 +0.1
444,046 + BACOVA_00763 0.21 -0.4
444,047 - BACOVA_00763 0.21 -0.4
444,047 - BACOVA_00763 0.21 -0.7
444,047 - BACOVA_00763 0.21 +0.4
444,080 - BACOVA_00763 0.28 -0.4
444,080 - BACOVA_00763 0.28 +0.7
444,083 + BACOVA_00763 0.28 -0.4
444,084 - BACOVA_00763 0.29 -1.1
444,162 + BACOVA_00763 0.44 -0.9
444,171 + BACOVA_00763 0.46 -1.7
444,271 + BACOVA_00763 0.65 +0.6
444,275 + BACOVA_00763 0.66 -0.1
444,275 + BACOVA_00763 0.66 +0.1
444,276 - BACOVA_00763 0.66 +0.5
444,302 - BACOVA_00763 0.71 +0.1
444,305 + BACOVA_00763 0.72 -2.6
444,305 + BACOVA_00763 0.72 -0.4
444,432 + -0.1
444,433 - +0.2
444,438 - +1.9
444,449 + +1.5
444,458 - +1.1
444,460 + +0.9
444,490 - -0.4
444,560 - +0.5
444,672 - BACOVA_00764 0.11 +1.1
444,676 + BACOVA_00764 0.12 +0.4
444,677 - BACOVA_00764 0.12 -1.2
444,689 - BACOVA_00764 0.12 -1.1
444,691 - BACOVA_00764 0.12 -2.1
444,779 + BACOVA_00764 0.17 -0.4
444,780 - BACOVA_00764 0.17 -1.4
444,815 + BACOVA_00764 0.19 -2.8
444,821 - BACOVA_00764 0.20 +1.9
444,822 + BACOVA_00764 0.20 -0.8
444,848 - BACOVA_00764 0.21 +0.3
444,864 + BACOVA_00764 0.22 -0.7
444,916 - BACOVA_00764 0.25 +1.1
444,917 + BACOVA_00764 0.25 +0.4
444,918 - BACOVA_00764 0.25 -0.3
444,920 + BACOVA_00764 0.25 -0.2

Or see this region's nucleotide sequence