Experiment: Bas61
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yafS and gloB are separated by 33 nucleotides gloB and mltD are separated by 209 nucleotides mltD and ubiE are separated by 47 nucleotides ubiE and yafD are separated by 77 nucleotides
NIAGMN_07825: yafS - Uncharacterized protein YafS, at 1,502,956 to 1,503,678
yafS
NIAGMN_07830: gloB - hydroxyacylglutathione hydrolase, at 1,503,712 to 1,504,467
gloB
NIAGMN_07835: mltD - murein transglycosylase D, at 1,504,677 to 1,505,897
mltD
NIAGMN_07840: ubiE - SAM-dependent methyltransferase, at 1,505,945 to 1,506,715
ubiE
NIAGMN_07845: yafD - endonuclease/exonuclease/phosphatase family protein, at 1,506,793 to 1,507,593
yafD
Position (kb) 1504
1505
1506 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1503.707 kb on - strand at 1503.707 kb on - strand at 1503.707 kb on - strand at 1503.707 kb on - strand at 1503.711 kb on + strand at 1503.712 kb on - strand at 1503.712 kb on - strand at 1503.721 kb on - strand at 1503.721 kb on - strand at 1503.726 kb on + strand at 1503.748 kb on + strand at 1503.748 kb on + strand at 1503.748 kb on + strand at 1503.748 kb on + strand at 1503.748 kb on + strand at 1503.748 kb on + strand at 1503.748 kb on + strand at 1503.749 kb on - strand at 1503.749 kb on - strand at 1503.749 kb on - strand at 1503.815 kb on + strand, within gloB at 1503.818 kb on + strand, within gloB at 1503.819 kb on - strand, within gloB at 1503.819 kb on - strand, within gloB at 1503.837 kb on + strand, within gloB at 1503.857 kb on + strand, within gloB at 1503.858 kb on - strand, within gloB at 1503.858 kb on - strand, within gloB at 1503.858 kb on - strand, within gloB at 1503.896 kb on + strand, within gloB at 1503.934 kb on + strand, within gloB at 1503.934 kb on + strand, within gloB at 1503.934 kb on + strand, within gloB at 1503.934 kb on + strand, within gloB at 1503.934 kb on + strand, within gloB at 1503.934 kb on + strand, within gloB at 1503.935 kb on - strand, within gloB at 1503.935 kb on - strand, within gloB at 1504.022 kb on + strand, within gloB at 1504.047 kb on - strand, within gloB at 1504.185 kb on + strand, within gloB at 1504.193 kb on + strand, within gloB at 1504.212 kb on + strand, within gloB at 1504.212 kb on + strand, within gloB at 1504.212 kb on + strand, within gloB at 1504.212 kb on + strand, within gloB at 1504.213 kb on - strand, within gloB at 1504.243 kb on - strand, within gloB at 1504.273 kb on + strand, within gloB at 1504.274 kb on - strand, within gloB at 1504.313 kb on + strand, within gloB at 1504.459 kb on - strand at 1504.518 kb on + strand at 1504.518 kb on + strand at 1504.518 kb on + strand at 1504.526 kb on + strand at 1504.555 kb on + strand at 1504.659 kb on - strand at 1504.799 kb on + strand, within mltD at 1504.806 kb on + strand, within mltD at 1504.806 kb on + strand, within mltD at 1504.819 kb on + strand, within mltD at 1504.819 kb on + strand, within mltD at 1504.819 kb on + strand, within mltD at 1504.839 kb on + strand, within mltD at 1504.841 kb on + strand, within mltD at 1504.841 kb on + strand, within mltD at 1504.841 kb on + strand, within mltD at 1504.841 kb on + strand, within mltD at 1504.841 kb on + strand, within mltD at 1504.841 kb on + strand, within mltD at 1504.845 kb on + strand, within mltD at 1504.845 kb on + strand, within mltD at 1504.845 kb on + strand, within mltD at 1504.845 kb on + strand, within mltD at 1504.846 kb on - strand, within mltD at 1504.874 kb on + strand, within mltD at 1504.894 kb on + strand, within mltD at 1504.897 kb on + strand, within mltD at 1504.897 kb on + strand, within mltD at 1504.897 kb on + strand, within mltD at 1504.897 kb on + strand, within mltD at 1504.897 kb on + strand, within mltD at 1504.897 kb on + strand, within mltD at 1504.897 kb on + strand, within mltD at 1504.900 kb on + strand, within mltD at 1504.900 kb on + strand, within mltD at 1505.121 kb on + strand, within mltD at 1505.121 kb on + strand, within mltD at 1505.121 kb on + strand, within mltD at 1505.123 kb on + strand, within mltD at 1505.156 kb on + strand, within mltD at 1505.156 kb on + strand, within mltD at 1505.226 kb on + strand, within mltD at 1505.226 kb on + strand, within mltD at 1505.227 kb on - strand, within mltD at 1505.278 kb on - strand, within mltD at 1505.284 kb on + strand, within mltD at 1505.284 kb on + strand, within mltD at 1505.284 kb on + strand, within mltD at 1505.284 kb on + strand, within mltD at 1505.366 kb on + strand, within mltD at 1505.448 kb on + strand, within mltD at 1505.518 kb on + strand, within mltD at 1505.518 kb on + strand, within mltD at 1505.518 kb on + strand, within mltD at 1505.543 kb on + strand, within mltD at 1505.552 kb on + strand, within mltD at 1505.572 kb on + strand, within mltD at 1505.660 kb on + strand, within mltD at 1505.660 kb on + strand, within mltD at 1505.699 kb on + strand, within mltD at 1505.700 kb on - strand, within mltD at 1505.703 kb on - strand, within mltD at 1505.738 kb on + strand, within mltD at 1505.738 kb on + strand, within mltD at 1505.738 kb on + strand, within mltD at 1505.738 kb on + strand, within mltD at 1505.738 kb on + strand, within mltD at 1505.738 kb on + strand, within mltD at 1505.738 kb on + strand, within mltD at 1505.742 kb on + strand, within mltD at 1505.742 kb on + strand, within mltD at 1505.742 kb on + strand, within mltD at 1505.742 kb on + strand, within mltD at 1505.910 kb on + strand at 1505.910 kb on + strand at 1505.910 kb on + strand at 1505.947 kb on - strand at 1505.956 kb on + strand at 1505.957 kb on - strand at 1505.966 kb on + strand at 1505.967 kb on - strand at 1505.967 kb on - strand at 1505.967 kb on - strand at 1505.967 kb on - strand at 1505.967 kb on - strand at 1506.016 kb on - strand at 1506.125 kb on - strand, within ubiE at 1506.125 kb on - strand, within ubiE at 1506.125 kb on - strand, within ubiE at 1506.125 kb on - strand, within ubiE at 1506.125 kb on - strand, within ubiE at 1506.131 kb on - strand, within ubiE at 1506.131 kb on - strand, within ubiE at 1506.139 kb on + strand, within ubiE at 1506.192 kb on + strand, within ubiE at 1506.193 kb on - strand, within ubiE at 1506.200 kb on + strand, within ubiE at 1506.218 kb on + strand, within ubiE at 1506.227 kb on + strand, within ubiE at 1506.273 kb on - strand, within ubiE at 1506.273 kb on - strand, within ubiE at 1506.273 kb on - strand, within ubiE at 1506.273 kb on - strand, within ubiE at 1506.373 kb on + strand, within ubiE at 1506.380 kb on - strand, within ubiE at 1506.418 kb on - strand, within ubiE at 1506.572 kb on + strand, within ubiE at 1506.572 kb on + strand, within ubiE at 1506.572 kb on + strand, within ubiE at 1506.573 kb on - strand, within ubiE at 1506.573 kb on - strand, within ubiE at 1506.618 kb on - strand, within ubiE at 1506.638 kb on + strand, within ubiE at 1506.638 kb on + strand, within ubiE at 1506.639 kb on - strand at 1506.639 kb on - strand at 1506.639 kb on - strand at 1506.655 kb on - strand at 1506.740 kb on + strand at 1506.742 kb on + strand at 1506.742 kb on + strand at 1506.743 kb on - strand at 1506.789 kb on + strand at 1506.789 kb on + strand at 1506.790 kb on - strand at 1506.790 kb on - strand at 1506.790 kb on - strand at 1506.790 kb on - strand at 1506.790 kb on - strand at 1506.794 kb on + strand at 1506.794 kb on + strand at 1506.794 kb on + strand at 1506.795 kb on - strand at 1506.795 kb on - strand at 1506.795 kb on - strand at 1506.798 kb on + strand at 1506.799 kb on - strand at 1506.799 kb on - strand at 1506.799 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas61 remove 1,503,707 - +1.9 1,503,707 - +1.6 1,503,707 - -1.5 1,503,707 - +0.3 1,503,711 + -0.4 1,503,712 - +0.4 1,503,712 - -0.1 1,503,721 - +0.8 1,503,721 - -0.9 1,503,726 + -2.1 1,503,748 + +0.0 1,503,748 + -2.2 1,503,748 + -0.4 1,503,748 + +0.1 1,503,748 + +0.1 1,503,748 + -0.4 1,503,748 + +0.9 1,503,749 - +0.2 1,503,749 - +0.2 1,503,749 - -2.2 1,503,815 + gloB NIAGMN_07830 0.14 -0.7 1,503,818 + gloB NIAGMN_07830 0.14 +0.6 1,503,819 - gloB NIAGMN_07830 0.14 +1.6 1,503,819 - gloB NIAGMN_07830 0.14 -1.3 1,503,837 + gloB NIAGMN_07830 0.17 -0.3 1,503,857 + gloB NIAGMN_07830 0.19 +1.0 1,503,858 - gloB NIAGMN_07830 0.19 -0.1 1,503,858 - gloB NIAGMN_07830 0.19 +0.0 1,503,858 - gloB NIAGMN_07830 0.19 +0.8 1,503,896 + gloB NIAGMN_07830 0.24 +1.6 1,503,934 + gloB NIAGMN_07830 0.29 +1.9 1,503,934 + gloB NIAGMN_07830 0.29 -0.1 1,503,934 + gloB NIAGMN_07830 0.29 -0.5 1,503,934 + gloB NIAGMN_07830 0.29 +0.0 1,503,934 + gloB NIAGMN_07830 0.29 +0.6 1,503,934 + gloB NIAGMN_07830 0.29 +0.3 1,503,935 - gloB NIAGMN_07830 0.29 +0.4 1,503,935 - gloB NIAGMN_07830 0.29 -0.4 1,504,022 + gloB NIAGMN_07830 0.41 +0.0 1,504,047 - gloB NIAGMN_07830 0.44 +0.0 1,504,185 + gloB NIAGMN_07830 0.63 +1.0 1,504,193 + gloB NIAGMN_07830 0.64 +1.0 1,504,212 + gloB NIAGMN_07830 0.66 +0.6 1,504,212 + gloB NIAGMN_07830 0.66 -1.2 1,504,212 + gloB NIAGMN_07830 0.66 +0.2 1,504,212 + gloB NIAGMN_07830 0.66 +0.0 1,504,213 - gloB NIAGMN_07830 0.66 +0.2 1,504,243 - gloB NIAGMN_07830 0.70 +1.3 1,504,273 + gloB NIAGMN_07830 0.74 +0.2 1,504,274 - gloB NIAGMN_07830 0.74 -0.2 1,504,313 + gloB NIAGMN_07830 0.79 -0.9 1,504,459 - -0.7 1,504,518 + +0.0 1,504,518 + -0.1 1,504,518 + +0.1 1,504,526 + -0.2 1,504,555 + +0.1 1,504,659 - +2.0 1,504,799 + mltD NIAGMN_07835 0.10 +0.0 1,504,806 + mltD NIAGMN_07835 0.11 +0.5 1,504,806 + mltD NIAGMN_07835 0.11 -0.1 1,504,819 + mltD NIAGMN_07835 0.12 -0.4 1,504,819 + mltD NIAGMN_07835 0.12 -0.4 1,504,819 + mltD NIAGMN_07835 0.12 +1.0 1,504,839 + mltD NIAGMN_07835 0.13 -0.6 1,504,841 + mltD NIAGMN_07835 0.13 +0.1 1,504,841 + mltD NIAGMN_07835 0.13 +1.3 1,504,841 + mltD NIAGMN_07835 0.13 -1.6 1,504,841 + mltD NIAGMN_07835 0.13 +1.6 1,504,841 + mltD NIAGMN_07835 0.13 +0.4 1,504,841 + mltD NIAGMN_07835 0.13 -0.8 1,504,845 + mltD NIAGMN_07835 0.14 +0.8 1,504,845 + mltD NIAGMN_07835 0.14 +0.3 1,504,845 + mltD NIAGMN_07835 0.14 -0.7 1,504,845 + mltD NIAGMN_07835 0.14 +0.1 1,504,846 - mltD NIAGMN_07835 0.14 +0.7 1,504,874 + mltD NIAGMN_07835 0.16 -0.6 1,504,894 + mltD NIAGMN_07835 0.18 -0.3 1,504,897 + mltD NIAGMN_07835 0.18 -1.3 1,504,897 + mltD NIAGMN_07835 0.18 -0.8 1,504,897 + mltD NIAGMN_07835 0.18 +0.6 1,504,897 + mltD NIAGMN_07835 0.18 +0.6 1,504,897 + mltD NIAGMN_07835 0.18 -1.7 1,504,897 + mltD NIAGMN_07835 0.18 -1.9 1,504,897 + mltD NIAGMN_07835 0.18 -0.7 1,504,900 + mltD NIAGMN_07835 0.18 -0.5 1,504,900 + mltD NIAGMN_07835 0.18 -1.7 1,505,121 + mltD NIAGMN_07835 0.36 +1.3 1,505,121 + mltD NIAGMN_07835 0.36 +0.3 1,505,121 + mltD NIAGMN_07835 0.36 +0.2 1,505,123 + mltD NIAGMN_07835 0.37 +0.0 1,505,156 + mltD NIAGMN_07835 0.39 -1.2 1,505,156 + mltD NIAGMN_07835 0.39 +0.0 1,505,226 + mltD NIAGMN_07835 0.45 +0.3 1,505,226 + mltD NIAGMN_07835 0.45 +0.4 1,505,227 - mltD NIAGMN_07835 0.45 +0.9 1,505,278 - mltD NIAGMN_07835 0.49 -1.4 1,505,284 + mltD NIAGMN_07835 0.50 +0.0 1,505,284 + mltD NIAGMN_07835 0.50 -0.7 1,505,284 + mltD NIAGMN_07835 0.50 +0.8 1,505,284 + mltD NIAGMN_07835 0.50 +0.0 1,505,366 + mltD NIAGMN_07835 0.56 +0.0 1,505,448 + mltD NIAGMN_07835 0.63 -2.1 1,505,518 + mltD NIAGMN_07835 0.69 +0.2 1,505,518 + mltD NIAGMN_07835 0.69 +1.2 1,505,518 + mltD NIAGMN_07835 0.69 -0.5 1,505,543 + mltD NIAGMN_07835 0.71 -0.7 1,505,552 + mltD NIAGMN_07835 0.72 +0.3 1,505,572 + mltD NIAGMN_07835 0.73 -0.1 1,505,660 + mltD NIAGMN_07835 0.81 -1.1 1,505,660 + mltD NIAGMN_07835 0.81 -1.2 1,505,699 + mltD NIAGMN_07835 0.84 -1.0 1,505,700 - mltD NIAGMN_07835 0.84 +0.6 1,505,703 - mltD NIAGMN_07835 0.84 +0.4 1,505,738 + mltD NIAGMN_07835 0.87 -0.6 1,505,738 + mltD NIAGMN_07835 0.87 +1.6 1,505,738 + mltD NIAGMN_07835 0.87 -0.3 1,505,738 + mltD NIAGMN_07835 0.87 -0.4 1,505,738 + mltD NIAGMN_07835 0.87 -0.7 1,505,738 + mltD NIAGMN_07835 0.87 +0.6 1,505,738 + mltD NIAGMN_07835 0.87 +0.6 1,505,742 + mltD NIAGMN_07835 0.87 -0.6 1,505,742 + mltD NIAGMN_07835 0.87 +0.1 1,505,742 + mltD NIAGMN_07835 0.87 +1.6 1,505,742 + mltD NIAGMN_07835 0.87 -0.4 1,505,910 + -1.1 1,505,910 + +0.4 1,505,910 + +0.2 1,505,947 - +1.2 1,505,956 + +0.0 1,505,957 - +0.4 1,505,966 + +0.0 1,505,967 - +0.5 1,505,967 - +0.6 1,505,967 - -0.1 1,505,967 - -0.7 1,505,967 - -0.9 1,506,016 - +0.9 1,506,125 - ubiE NIAGMN_07840 0.23 +1.0 1,506,125 - ubiE NIAGMN_07840 0.23 +1.6 1,506,125 - ubiE NIAGMN_07840 0.23 +1.6 1,506,125 - ubiE NIAGMN_07840 0.23 +0.3 1,506,125 - ubiE NIAGMN_07840 0.23 -0.4 1,506,131 - ubiE NIAGMN_07840 0.24 +1.6 1,506,131 - ubiE NIAGMN_07840 0.24 -0.6 1,506,139 + ubiE NIAGMN_07840 0.25 +1.2 1,506,192 + ubiE NIAGMN_07840 0.32 -0.2 1,506,193 - ubiE NIAGMN_07840 0.32 +1.3 1,506,200 + ubiE NIAGMN_07840 0.33 +1.6 1,506,218 + ubiE NIAGMN_07840 0.35 -0.7 1,506,227 + ubiE NIAGMN_07840 0.37 +1.4 1,506,273 - ubiE NIAGMN_07840 0.43 +0.4 1,506,273 - ubiE NIAGMN_07840 0.43 +0.0 1,506,273 - ubiE NIAGMN_07840 0.43 +0.3 1,506,273 - ubiE NIAGMN_07840 0.43 +1.9 1,506,373 + ubiE NIAGMN_07840 0.56 +0.0 1,506,380 - ubiE NIAGMN_07840 0.56 +1.0 1,506,418 - ubiE NIAGMN_07840 0.61 -1.2 1,506,572 + ubiE NIAGMN_07840 0.81 +0.4 1,506,572 + ubiE NIAGMN_07840 0.81 -1.4 1,506,572 + ubiE NIAGMN_07840 0.81 -1.0 1,506,573 - ubiE NIAGMN_07840 0.81 -0.4 1,506,573 - ubiE NIAGMN_07840 0.81 +2.6 1,506,618 - ubiE NIAGMN_07840 0.87 -0.4 1,506,638 + ubiE NIAGMN_07840 0.90 +1.3 1,506,638 + ubiE NIAGMN_07840 0.90 +0.2 1,506,639 - -0.4 1,506,639 - -0.5 1,506,639 - -0.3 1,506,655 - +0.7 1,506,740 + +0.4 1,506,742 + +0.9 1,506,742 + -0.1 1,506,743 - -0.7 1,506,789 + +2.4 1,506,789 + -0.7 1,506,790 - -0.1 1,506,790 - +0.7 1,506,790 - -0.9 1,506,790 - +0.6 1,506,790 - -0.4 1,506,794 + -0.3 1,506,794 + -0.1 1,506,794 + +0.0 1,506,795 - -0.3 1,506,795 - +0.5 1,506,795 - +0.6 1,506,798 + -0.2 1,506,799 - -1.7 1,506,799 - -0.4 1,506,799 - -0.1
Or see this region's nucleotide sequence