Strain Fitness in Escherichia coli ECRC102 around NIAGMN_05390

Experiment: Bas61

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntleuS and lptE are separated by 14 nucleotideslptE and holA overlap by 1 nucleotides NIAGMN_05385: leuS - leucine--tRNA ligase, at 984,899 to 987,481 leuS NIAGMN_05390: lptE - LPS assembly lipoprotein LptE, at 987,496 to 988,077 lptE NIAGMN_05395: holA - DNA polymerase III subunit delta, at 988,077 to 989,108 holA Position (kb) 987 988 989Strain fitness (log2 ratio) -1 0 1at 989.076 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas61
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989,076 - -1.6

Or see this region's nucleotide sequence