Experiment: Bas61
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gsiA and iaaA overlap by 14 nucleotides iaaA and gsiA are separated by 12 nucleotides gsiA and moeA are separated by 203 nucleotides
NIAGMN_04145: gsiA - glutathione ABC transporter ATP-binding protein GsiA, at 747,315 to 749,186
gsiA
NIAGMN_04150: iaaA - beta-aspartyl-peptidase, at 749,173 to 749,778
iaaA
NIAGMN_04155: gsiA - glutathione ABC transporter ATP-binding protein GsiA, at 749,791 to 750,138
gsiA
NIAGMN_04160: moeA - molybdopterin molybdotransferase MoeA, at 750,342 to 751,577
moeA
Position (kb) 749
750 Strain fitness (log2 ratio) -2
-1
0
1
2 at 748.460 kb on - strand, within gsiA at 748.515 kb on - strand, within gsiA at 748.549 kb on - strand, within gsiA at 748.557 kb on + strand, within gsiA at 748.558 kb on - strand, within gsiA at 748.824 kb on - strand, within gsiA at 748.824 kb on - strand, within gsiA at 749.024 kb on + strand at 749.100 kb on + strand at 749.101 kb on - strand at 749.120 kb on + strand at 749.132 kb on + strand at 749.133 kb on - strand at 749.133 kb on - strand at 749.207 kb on + strand at 749.207 kb on + strand at 749.207 kb on + strand at 749.208 kb on - strand at 749.238 kb on - strand, within iaaA at 749.348 kb on - strand, within iaaA at 749.377 kb on + strand, within iaaA at 749.412 kb on - strand, within iaaA at 749.412 kb on - strand, within iaaA at 749.681 kb on - strand, within iaaA at 749.691 kb on - strand, within iaaA at 749.871 kb on + strand, within gsiA at 750.057 kb on - strand, within gsiA at 750.062 kb on - strand, within gsiA at 750.141 kb on + strand at 750.141 kb on + strand at 750.142 kb on - strand at 750.142 kb on - strand at 750.176 kb on - strand at 750.177 kb on + strand at 750.178 kb on - strand at 750.181 kb on + strand at 750.220 kb on - strand at 750.221 kb on + strand at 750.222 kb on - strand at 750.234 kb on - strand at 750.242 kb on + strand at 750.242 kb on + strand at 750.242 kb on + strand at 750.242 kb on + strand at 750.243 kb on - strand at 750.243 kb on - strand at 750.243 kb on - strand at 750.261 kb on + strand at 750.277 kb on + strand at 750.277 kb on + strand at 750.277 kb on + strand at 750.302 kb on + strand at 750.302 kb on + strand at 750.302 kb on + strand at 750.302 kb on + strand at 750.303 kb on - strand at 750.455 kb on + strand at 750.456 kb on - strand at 750.632 kb on + strand, within moeA at 750.767 kb on + strand, within moeA at 750.767 kb on + strand, within moeA
Per-strain Table
Position Strand Gene LocusTag Fraction Bas61 remove 748,460 - gsiA NIAGMN_04145 0.61 +1.3 748,515 - gsiA NIAGMN_04145 0.64 +1.3 748,549 - gsiA NIAGMN_04145 0.66 +0.3 748,557 + gsiA NIAGMN_04145 0.66 +1.3 748,558 - gsiA NIAGMN_04145 0.66 +1.8 748,824 - gsiA NIAGMN_04145 0.81 +1.8 748,824 - gsiA NIAGMN_04145 0.81 -0.9 749,024 + -0.7 749,100 + +0.8 749,101 - +0.6 749,120 + -1.2 749,132 + +1.3 749,133 - +0.3 749,133 - -0.5 749,207 + -0.2 749,207 + -0.4 749,207 + +0.6 749,208 - -2.0 749,238 - iaaA NIAGMN_04150 0.11 -0.4 749,348 - iaaA NIAGMN_04150 0.29 -1.0 749,377 + iaaA NIAGMN_04150 0.34 +1.3 749,412 - iaaA NIAGMN_04150 0.39 -1.2 749,412 - iaaA NIAGMN_04150 0.39 -0.7 749,681 - iaaA NIAGMN_04150 0.84 -0.7 749,691 - iaaA NIAGMN_04150 0.85 -0.1 749,871 + gsiA NIAGMN_04155 0.23 +0.6 750,057 - gsiA NIAGMN_04155 0.76 -0.7 750,062 - gsiA NIAGMN_04155 0.78 +0.1 750,141 + +1.3 750,141 + -1.7 750,142 - -2.0 750,142 - +0.1 750,176 - +0.8 750,177 + -0.2 750,178 - -0.3 750,181 + +0.1 750,220 - +0.1 750,221 + -0.1 750,222 - -1.0 750,234 - -1.2 750,242 + +0.3 750,242 + -0.0 750,242 + +0.5 750,242 + -0.2 750,243 - -0.2 750,243 - +0.8 750,243 - +0.3 750,261 + +0.8 750,277 + -1.0 750,277 + -0.4 750,277 + -0.3 750,302 + -1.1 750,302 + -0.1 750,302 + +2.3 750,302 + -0.2 750,303 - +0.0 750,455 + +0.0 750,456 - +1.8 750,632 + moeA NIAGMN_04160 0.23 +0.3 750,767 + moeA NIAGMN_04160 0.34 +0.6 750,767 + moeA NIAGMN_04160 0.34 +1.3
Or see this region's nucleotide sequence