Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02798

Experiment: Yeast Extract 2.5 mg/mL (C) complex media

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBACOVA_02797 and BACOVA_02798 are separated by 47 nucleotidesBACOVA_02798 and BACOVA_02799 are separated by 201 nucleotides BACOVA_02797: BACOVA_02797 - glycosyl hydrolase, family 43, at 252,467 to 253,654 _02797 BACOVA_02798: BACOVA_02798 - arylsulfatase, at 253,702 to 255,255 _02798 BACOVA_02799: BACOVA_02799 - hypothetical protein, at 255,457 to 257,511 _02799 Position (kb) 253 254 255 256Strain fitness (log2 ratio) -2 -1 0 1 2at 252.715 kb on + strand, within BACOVA_02797at 252.715 kb on + strand, within BACOVA_02797at 252.756 kb on + strand, within BACOVA_02797at 252.756 kb on + strand, within BACOVA_02797at 252.757 kb on - strand, within BACOVA_02797at 252.760 kb on + strand, within BACOVA_02797at 252.760 kb on + strand, within BACOVA_02797at 252.761 kb on - strand, within BACOVA_02797at 252.790 kb on + strand, within BACOVA_02797at 252.791 kb on - strand, within BACOVA_02797at 252.807 kb on + strand, within BACOVA_02797at 252.807 kb on + strand, within BACOVA_02797at 252.807 kb on + strand, within BACOVA_02797at 252.808 kb on - strand, within BACOVA_02797at 252.845 kb on - strand, within BACOVA_02797at 252.847 kb on - strand, within BACOVA_02797at 252.929 kb on - strand, within BACOVA_02797at 252.929 kb on - strand, within BACOVA_02797at 252.929 kb on - strand, within BACOVA_02797at 252.931 kb on - strand, within BACOVA_02797at 252.968 kb on - strand, within BACOVA_02797at 253.018 kb on + strand, within BACOVA_02797at 253.117 kb on + strand, within BACOVA_02797at 253.141 kb on + strand, within BACOVA_02797at 253.216 kb on - strand, within BACOVA_02797at 253.216 kb on - strand, within BACOVA_02797at 253.231 kb on + strand, within BACOVA_02797at 253.231 kb on + strand, within BACOVA_02797at 253.232 kb on - strand, within BACOVA_02797at 253.232 kb on - strand, within BACOVA_02797at 253.233 kb on + strand, within BACOVA_02797at 253.280 kb on + strand, within BACOVA_02797at 253.310 kb on - strand, within BACOVA_02797at 253.388 kb on - strand, within BACOVA_02797at 253.388 kb on - strand, within BACOVA_02797at 253.407 kb on + strand, within BACOVA_02797at 253.408 kb on - strand, within BACOVA_02797at 253.410 kb on + strand, within BACOVA_02797at 253.411 kb on - strand, within BACOVA_02797at 253.411 kb on - strand, within BACOVA_02797at 253.411 kb on - strand, within BACOVA_02797at 253.491 kb on - strand, within BACOVA_02797at 253.491 kb on - strand, within BACOVA_02797at 253.522 kb on - strand, within BACOVA_02797at 253.524 kb on - strand, within BACOVA_02797at 253.524 kb on - strand, within BACOVA_02797at 253.524 kb on - strand, within BACOVA_02797at 253.552 kb on + strandat 253.599 kb on + strandat 253.611 kb on - strandat 253.616 kb on + strandat 253.623 kb on - strandat 253.669 kb on - strandat 253.677 kb on + strandat 253.677 kb on + strandat 253.681 kb on + strandat 253.685 kb on + strandat 253.686 kb on - strandat 253.686 kb on - strandat 253.696 kb on + strandat 253.722 kb on - strandat 253.836 kb on - strandat 253.858 kb on - strand, within BACOVA_02798at 253.888 kb on - strand, within BACOVA_02798at 253.889 kb on + strand, within BACOVA_02798at 254.081 kb on - strand, within BACOVA_02798at 254.142 kb on + strand, within BACOVA_02798at 254.223 kb on + strand, within BACOVA_02798at 254.267 kb on - strand, within BACOVA_02798at 254.325 kb on - strand, within BACOVA_02798at 254.337 kb on - strand, within BACOVA_02798at 254.450 kb on + strand, within BACOVA_02798at 254.450 kb on + strand, within BACOVA_02798at 254.525 kb on + strand, within BACOVA_02798at 254.603 kb on + strand, within BACOVA_02798at 254.604 kb on - strand, within BACOVA_02798at 254.604 kb on - strand, within BACOVA_02798at 254.841 kb on - strand, within BACOVA_02798at 254.907 kb on + strand, within BACOVA_02798at 254.927 kb on - strand, within BACOVA_02798at 254.964 kb on + strand, within BACOVA_02798at 254.980 kb on + strand, within BACOVA_02798at 255.053 kb on + strand, within BACOVA_02798at 255.054 kb on - strand, within BACOVA_02798at 255.070 kb on + strand, within BACOVA_02798at 255.070 kb on + strand, within BACOVA_02798at 255.070 kb on + strand, within BACOVA_02798at 255.071 kb on - strand, within BACOVA_02798at 255.162 kb on + strandat 255.163 kb on - strandat 255.165 kb on + strandat 255.175 kb on - strandat 255.220 kb on + strandat 255.221 kb on - strandat 255.283 kb on + strandat 255.338 kb on - strandat 255.374 kb on + strandat 255.375 kb on - strandat 255.384 kb on + strandat 255.385 kb on - strandat 255.385 kb on - strandat 255.469 kb on + strandat 255.469 kb on + strandat 255.469 kb on + strandat 255.470 kb on - strandat 255.527 kb on + strandat 255.600 kb on + strandat 255.600 kb on + strandat 255.601 kb on - strandat 255.601 kb on - strandat 255.643 kb on + strandat 255.644 kb on - strandat 255.670 kb on + strand, within BACOVA_02799at 255.685 kb on - strand, within BACOVA_02799at 255.686 kb on + strand, within BACOVA_02799at 255.687 kb on - strand, within BACOVA_02799at 255.703 kb on - strand, within BACOVA_02799at 255.707 kb on + strand, within BACOVA_02799at 255.743 kb on - strand, within BACOVA_02799at 255.807 kb on - strand, within BACOVA_02799at 255.824 kb on - strand, within BACOVA_02799at 255.829 kb on - strand, within BACOVA_02799at 255.835 kb on + strand, within BACOVA_02799at 255.844 kb on - strand, within BACOVA_02799at 255.975 kb on + strand, within BACOVA_02799at 255.976 kb on - strand, within BACOVA_02799at 256.037 kb on + strand, within BACOVA_02799at 256.038 kb on - strand, within BACOVA_02799at 256.085 kb on + strand, within BACOVA_02799at 256.085 kb on + strand, within BACOVA_02799at 256.233 kb on - strand, within BACOVA_02799

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Yeast Extract 2.5 mg/mL (C) complex media
remove
252,715 + BACOVA_02797 0.21 +0.2
252,715 + BACOVA_02797 0.21 +0.1
252,756 + BACOVA_02797 0.24 -0.7
252,756 + BACOVA_02797 0.24 -0.7
252,757 - BACOVA_02797 0.24 -0.4
252,760 + BACOVA_02797 0.25 -0.8
252,760 + BACOVA_02797 0.25 +0.1
252,761 - BACOVA_02797 0.25 -0.5
252,790 + BACOVA_02797 0.27 -0.1
252,791 - BACOVA_02797 0.27 +0.1
252,807 + BACOVA_02797 0.29 -0.0
252,807 + BACOVA_02797 0.29 -0.5
252,807 + BACOVA_02797 0.29 -0.1
252,808 - BACOVA_02797 0.29 -0.1
252,845 - BACOVA_02797 0.32 -0.5
252,847 - BACOVA_02797 0.32 +0.1
252,929 - BACOVA_02797 0.39 +0.3
252,929 - BACOVA_02797 0.39 -1.6
252,929 - BACOVA_02797 0.39 -0.7
252,931 - BACOVA_02797 0.39 -0.3
252,968 - BACOVA_02797 0.42 -0.4
253,018 + BACOVA_02797 0.46 -0.9
253,117 + BACOVA_02797 0.55 -0.5
253,141 + BACOVA_02797 0.57 +1.1
253,216 - BACOVA_02797 0.63 +0.3
253,216 - BACOVA_02797 0.63 -0.7
253,231 + BACOVA_02797 0.64 -0.4
253,231 + BACOVA_02797 0.64 -0.2
253,232 - BACOVA_02797 0.64 -0.0
253,232 - BACOVA_02797 0.64 -0.6
253,233 + BACOVA_02797 0.64 -0.9
253,280 + BACOVA_02797 0.68 +0.2
253,310 - BACOVA_02797 0.71 -1.2
253,388 - BACOVA_02797 0.78 -0.9
253,388 - BACOVA_02797 0.78 -0.7
253,407 + BACOVA_02797 0.79 -0.9
253,408 - BACOVA_02797 0.79 +0.2
253,410 + BACOVA_02797 0.79 +0.2
253,411 - BACOVA_02797 0.79 +0.3
253,411 - BACOVA_02797 0.79 -0.6
253,411 - BACOVA_02797 0.79 +0.4
253,491 - BACOVA_02797 0.86 -0.2
253,491 - BACOVA_02797 0.86 +0.1
253,522 - BACOVA_02797 0.89 +0.5
253,524 - BACOVA_02797 0.89 -0.3
253,524 - BACOVA_02797 0.89 -0.3
253,524 - BACOVA_02797 0.89 -0.3
253,552 + +0.4
253,599 + +0.1
253,611 - +0.2
253,616 + -1.1
253,623 - +0.0
253,669 - -0.2
253,677 + +0.3
253,677 + -0.2
253,681 + +0.5
253,685 + -0.3
253,686 - -0.7
253,686 - -0.1
253,696 + -0.5
253,722 - -0.3
253,836 - +0.1
253,858 - BACOVA_02798 0.10 -2.3
253,888 - BACOVA_02798 0.12 +0.1
253,889 + BACOVA_02798 0.12 -1.0
254,081 - BACOVA_02798 0.24 -0.5
254,142 + BACOVA_02798 0.28 +0.9
254,223 + BACOVA_02798 0.34 +0.2
254,267 - BACOVA_02798 0.36 -1.4
254,325 - BACOVA_02798 0.40 -0.4
254,337 - BACOVA_02798 0.41 -1.8
254,450 + BACOVA_02798 0.48 -2.1
254,450 + BACOVA_02798 0.48 -0.4
254,525 + BACOVA_02798 0.53 -0.8
254,603 + BACOVA_02798 0.58 -0.9
254,604 - BACOVA_02798 0.58 -0.5
254,604 - BACOVA_02798 0.58 +0.5
254,841 - BACOVA_02798 0.73 -1.6
254,907 + BACOVA_02798 0.78 -1.1
254,927 - BACOVA_02798 0.79 -0.8
254,964 + BACOVA_02798 0.81 +0.0
254,980 + BACOVA_02798 0.82 -1.1
255,053 + BACOVA_02798 0.87 -0.5
255,054 - BACOVA_02798 0.87 +0.2
255,070 + BACOVA_02798 0.88 +0.3
255,070 + BACOVA_02798 0.88 +0.3
255,070 + BACOVA_02798 0.88 -0.3
255,071 - BACOVA_02798 0.88 -0.2
255,162 + +0.2
255,163 - +0.2
255,165 + +0.5
255,175 - +0.0
255,220 + -1.1
255,221 - +0.4
255,283 + +0.3
255,338 - -0.1
255,374 + +0.7
255,375 - -0.2
255,384 + +0.2
255,385 - -0.6
255,385 - +2.6
255,469 + +0.4
255,469 + +0.6
255,469 + +0.3
255,470 - -0.7
255,527 + +0.6
255,600 + +0.6
255,600 + -0.2
255,601 - +0.3
255,601 - -1.0
255,643 + +0.4
255,644 - -0.1
255,670 + BACOVA_02799 0.10 +0.9
255,685 - BACOVA_02799 0.11 +0.0
255,686 + BACOVA_02799 0.11 +0.3
255,687 - BACOVA_02799 0.11 -0.1
255,703 - BACOVA_02799 0.12 -1.3
255,707 + BACOVA_02799 0.12 -0.8
255,743 - BACOVA_02799 0.14 -0.7
255,807 - BACOVA_02799 0.17 +0.5
255,824 - BACOVA_02799 0.18 -0.6
255,829 - BACOVA_02799 0.18 -0.0
255,835 + BACOVA_02799 0.18 +0.2
255,844 - BACOVA_02799 0.19 -0.5
255,975 + BACOVA_02799 0.25 -0.5
255,976 - BACOVA_02799 0.25 -1.0
256,037 + BACOVA_02799 0.28 -1.0
256,038 - BACOVA_02799 0.28 +0.7
256,085 + BACOVA_02799 0.31 +0.5
256,085 + BACOVA_02799 0.31 +1.1
256,233 - BACOVA_02799 0.38 -1.5

Or see this region's nucleotide sequence