Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01581

Experiment: Yeast Extract 2.5 mg/mL (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01578 and BACOVA_01579 are separated by 25 nucleotidesBACOVA_01579 and BACOVA_01580 are separated by 40 nucleotidesBACOVA_01580 and BACOVA_01581 overlap by 14 nucleotidesBACOVA_01581 and BACOVA_01582 are separated by 73 nucleotidesBACOVA_01582 and BACOVA_01583 are separated by 24 nucleotides BACOVA_01578: BACOVA_01578 - Ser/Thr phosphatase family protein, at 80,531 to 81,370 _01578 BACOVA_01579: BACOVA_01579 - 5'-nucleotidase, C-terminal domain protein, at 81,396 to 82,181 _01579 BACOVA_01580: BACOVA_01580 - hypothetical protein, at 82,222 to 82,350 _01580 BACOVA_01581: BACOVA_01581 - ribosomal protein L19, at 82,337 to 82,687 _01581 BACOVA_01582: BACOVA_01582 - hypothetical protein, at 82,761 to 82,892 _01582 BACOVA_01583: BACOVA_01583 - ROK family protein, at 82,917 to 83,885 _01583 Position (kb) 82 83Strain fitness (log2 ratio) -1 0 1at 81.341 kb on + strandat 81.351 kb on - strandat 81.351 kb on - strandat 81.354 kb on - strandat 81.383 kb on + strandat 81.402 kb on + strandat 81.407 kb on + strandat 81.410 kb on + strandat 81.410 kb on + strandat 81.411 kb on - strandat 81.431 kb on + strandat 81.466 kb on + strandat 81.467 kb on - strandat 81.508 kb on - strand, within BACOVA_01579at 81.738 kb on + strand, within BACOVA_01579at 81.784 kb on - strand, within BACOVA_01579at 81.792 kb on - strand, within BACOVA_01579at 81.810 kb on - strand, within BACOVA_01579at 81.810 kb on - strand, within BACOVA_01579at 81.810 kb on - strand, within BACOVA_01579at 81.831 kb on + strand, within BACOVA_01579at 81.832 kb on - strand, within BACOVA_01579at 81.832 kb on - strand, within BACOVA_01579at 81.964 kb on + strand, within BACOVA_01579at 81.964 kb on + strand, within BACOVA_01579at 81.991 kb on + strand, within BACOVA_01579at 81.991 kb on + strand, within BACOVA_01579at 82.073 kb on + strand, within BACOVA_01579at 82.074 kb on - strand, within BACOVA_01579at 82.078 kb on - strand, within BACOVA_01579at 82.159 kb on + strandat 82.160 kb on - strandat 82.160 kb on - strandat 82.168 kb on + strandat 82.198 kb on + strandat 82.198 kb on + strandat 82.199 kb on - strandat 82.212 kb on - strandat 82.227 kb on + strandat 82.288 kb on + strand, within BACOVA_01580at 82.295 kb on + strand, within BACOVA_01580at 82.295 kb on + strand, within BACOVA_01580at 82.748 kb on - strandat 82.786 kb on + strand, within BACOVA_01582at 82.787 kb on - strand, within BACOVA_01582at 82.831 kb on + strand, within BACOVA_01582at 82.849 kb on - strand, within BACOVA_01582at 82.875 kb on - strand, within BACOVA_01582at 82.903 kb on - strandat 82.903 kb on - strandat 82.903 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Yeast Extract 2.5 mg/mL (C) complex media
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81,341 + -0.5
81,351 - +1.3
81,351 - +0.1
81,354 - -0.8
81,383 + -1.0
81,402 + -1.0
81,407 + -0.2
81,410 + -0.2
81,410 + +0.3
81,411 - -0.5
81,431 + -0.1
81,466 + -0.4
81,467 - +0.7
81,508 - BACOVA_01579 0.14 -0.1
81,738 + BACOVA_01579 0.44 +0.3
81,784 - BACOVA_01579 0.49 +0.2
81,792 - BACOVA_01579 0.50 -0.3
81,810 - BACOVA_01579 0.53 -0.8
81,810 - BACOVA_01579 0.53 +0.4
81,810 - BACOVA_01579 0.53 +0.4
81,831 + BACOVA_01579 0.55 -1.5
81,832 - BACOVA_01579 0.55 -0.3
81,832 - BACOVA_01579 0.55 +0.1
81,964 + BACOVA_01579 0.72 -0.2
81,964 + BACOVA_01579 0.72 -0.2
81,991 + BACOVA_01579 0.76 -0.3
81,991 + BACOVA_01579 0.76 -1.4
82,073 + BACOVA_01579 0.86 -0.2
82,074 - BACOVA_01579 0.86 -0.3
82,078 - BACOVA_01579 0.87 -0.9
82,159 + +0.4
82,160 - -1.3
82,160 - -0.2
82,168 + -0.5
82,198 + -0.4
82,198 + -0.1
82,199 - +0.6
82,212 - -1.6
82,227 + -0.6
82,288 + BACOVA_01580 0.51 -0.9
82,295 + BACOVA_01580 0.57 -0.2
82,295 + BACOVA_01580 0.57 +0.7
82,748 - -0.1
82,786 + BACOVA_01582 0.19 +1.1
82,787 - BACOVA_01582 0.20 +1.1
82,831 + BACOVA_01582 0.53 +1.6
82,849 - BACOVA_01582 0.67 -0.3
82,875 - BACOVA_01582 0.86 +1.0
82,903 - +0.7
82,903 - -0.4
82,903 - +0.3

Or see this region's nucleotide sequence