Experiment: Yeast Extract 2.5 mg/mL (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01578 and BACOVA_01579 are separated by 25 nucleotides BACOVA_01579 and BACOVA_01580 are separated by 40 nucleotides BACOVA_01580 and BACOVA_01581 overlap by 14 nucleotides BACOVA_01581 and BACOVA_01582 are separated by 73 nucleotides BACOVA_01582 and BACOVA_01583 are separated by 24 nucleotides
BACOVA_01578: BACOVA_01578 - Ser/Thr phosphatase family protein, at 80,531 to 81,370
_01578
BACOVA_01579: BACOVA_01579 - 5'-nucleotidase, C-terminal domain protein, at 81,396 to 82,181
_01579
BACOVA_01580: BACOVA_01580 - hypothetical protein, at 82,222 to 82,350
_01580
BACOVA_01581: BACOVA_01581 - ribosomal protein L19, at 82,337 to 82,687
_01581
BACOVA_01582: BACOVA_01582 - hypothetical protein, at 82,761 to 82,892
_01582
BACOVA_01583: BACOVA_01583 - ROK family protein, at 82,917 to 83,885
_01583
Position (kb)
82
83 Strain fitness (log2 ratio)
-1
0
1 at 81.341 kb on + strand at 81.351 kb on - strand at 81.351 kb on - strand at 81.354 kb on - strand at 81.383 kb on + strand at 81.402 kb on + strand at 81.407 kb on + strand at 81.410 kb on + strand at 81.410 kb on + strand at 81.411 kb on - strand at 81.431 kb on + strand at 81.466 kb on + strand at 81.467 kb on - strand at 81.508 kb on - strand, within BACOVA_01579 at 81.738 kb on + strand, within BACOVA_01579 at 81.784 kb on - strand, within BACOVA_01579 at 81.792 kb on - strand, within BACOVA_01579 at 81.810 kb on - strand, within BACOVA_01579 at 81.810 kb on - strand, within BACOVA_01579 at 81.810 kb on - strand, within BACOVA_01579 at 81.831 kb on + strand, within BACOVA_01579 at 81.832 kb on - strand, within BACOVA_01579 at 81.832 kb on - strand, within BACOVA_01579 at 81.964 kb on + strand, within BACOVA_01579 at 81.964 kb on + strand, within BACOVA_01579 at 81.991 kb on + strand, within BACOVA_01579 at 81.991 kb on + strand, within BACOVA_01579 at 82.073 kb on + strand, within BACOVA_01579 at 82.074 kb on - strand, within BACOVA_01579 at 82.078 kb on - strand, within BACOVA_01579 at 82.159 kb on + strand at 82.160 kb on - strand at 82.160 kb on - strand at 82.168 kb on + strand at 82.198 kb on + strand at 82.198 kb on + strand at 82.199 kb on - strand at 82.212 kb on - strand at 82.227 kb on + strand at 82.288 kb on + strand, within BACOVA_01580 at 82.295 kb on + strand, within BACOVA_01580 at 82.295 kb on + strand, within BACOVA_01580 at 82.748 kb on - strand at 82.786 kb on + strand, within BACOVA_01582 at 82.787 kb on - strand, within BACOVA_01582 at 82.831 kb on + strand, within BACOVA_01582 at 82.849 kb on - strand, within BACOVA_01582 at 82.875 kb on - strand, within BACOVA_01582 at 82.903 kb on - strand at 82.903 kb on - strand at 82.903 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Yeast Extract 2.5 mg/mL (C) complex media remove 81,341 + -0.5 81,351 - +1.3 81,351 - +0.1 81,354 - -0.8 81,383 + -1.0 81,402 + -1.0 81,407 + -0.2 81,410 + -0.2 81,410 + +0.3 81,411 - -0.5 81,431 + -0.1 81,466 + -0.4 81,467 - +0.7 81,508 - BACOVA_01579 0.14 -0.1 81,738 + BACOVA_01579 0.44 +0.3 81,784 - BACOVA_01579 0.49 +0.2 81,792 - BACOVA_01579 0.50 -0.3 81,810 - BACOVA_01579 0.53 -0.8 81,810 - BACOVA_01579 0.53 +0.4 81,810 - BACOVA_01579 0.53 +0.4 81,831 + BACOVA_01579 0.55 -1.5 81,832 - BACOVA_01579 0.55 -0.3 81,832 - BACOVA_01579 0.55 +0.1 81,964 + BACOVA_01579 0.72 -0.2 81,964 + BACOVA_01579 0.72 -0.2 81,991 + BACOVA_01579 0.76 -0.3 81,991 + BACOVA_01579 0.76 -1.4 82,073 + BACOVA_01579 0.86 -0.2 82,074 - BACOVA_01579 0.86 -0.3 82,078 - BACOVA_01579 0.87 -0.9 82,159 + +0.4 82,160 - -1.3 82,160 - -0.2 82,168 + -0.5 82,198 + -0.4 82,198 + -0.1 82,199 - +0.6 82,212 - -1.6 82,227 + -0.6 82,288 + BACOVA_01580 0.51 -0.9 82,295 + BACOVA_01580 0.57 -0.2 82,295 + BACOVA_01580 0.57 +0.7 82,748 - -0.1 82,786 + BACOVA_01582 0.19 +1.1 82,787 - BACOVA_01582 0.20 +1.1 82,831 + BACOVA_01582 0.53 +1.6 82,849 - BACOVA_01582 0.67 -0.3 82,875 - BACOVA_01582 0.86 +1.0 82,903 - +0.7 82,903 - -0.4 82,903 - +0.3
Or see this region's nucleotide sequence