Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00787

Experiment: Yeast Extract 2.5 mg/mL (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00786 and BACOVA_00787 are separated by 58 nucleotidesBACOVA_00787 and BACOVA_00788 are separated by 173 nucleotides BACOVA_00786: BACOVA_00786 - hypothetical protein, at 471,662 to 473,344 _00786 BACOVA_00787: BACOVA_00787 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 473,403 to 477,797 _00787 BACOVA_00788: BACOVA_00788 - glycosyl hydrolase family 2, sugar binding domain protein, at 477,971 to 480,625 _00788 Position (kb) 473 474 475 476 477 478Strain fitness (log2 ratio) -2 -1 0 1 2at 472.534 kb on + strand, within BACOVA_00786at 472.541 kb on - strand, within BACOVA_00786at 472.576 kb on - strand, within BACOVA_00786at 472.579 kb on + strand, within BACOVA_00786at 472.615 kb on + strand, within BACOVA_00786at 472.622 kb on + strand, within BACOVA_00786at 472.681 kb on + strand, within BACOVA_00786at 472.681 kb on + strand, within BACOVA_00786at 472.682 kb on - strand, within BACOVA_00786at 472.900 kb on - strand, within BACOVA_00786at 472.911 kb on - strand, within BACOVA_00786at 472.946 kb on + strand, within BACOVA_00786at 472.960 kb on + strand, within BACOVA_00786at 473.063 kb on - strand, within BACOVA_00786at 473.065 kb on - strand, within BACOVA_00786at 473.143 kb on + strand, within BACOVA_00786at 473.268 kb on - strandat 473.294 kb on + strandat 473.358 kb on - strandat 473.361 kb on + strandat 473.362 kb on - strandat 473.369 kb on + strandat 473.397 kb on - strandat 473.477 kb on + strandat 473.478 kb on - strandat 473.478 kb on - strandat 473.479 kb on + strandat 473.480 kb on - strandat 473.482 kb on + strandat 473.556 kb on - strandat 473.661 kb on + strandat 473.676 kb on - strandat 473.863 kb on + strand, within BACOVA_00787at 473.864 kb on - strand, within BACOVA_00787at 473.864 kb on - strand, within BACOVA_00787at 473.874 kb on - strand, within BACOVA_00787at 473.966 kb on + strand, within BACOVA_00787at 474.061 kb on + strand, within BACOVA_00787at 474.062 kb on - strand, within BACOVA_00787at 474.095 kb on + strand, within BACOVA_00787at 474.139 kb on - strand, within BACOVA_00787at 474.282 kb on - strand, within BACOVA_00787at 474.293 kb on - strand, within BACOVA_00787at 474.451 kb on + strand, within BACOVA_00787at 474.451 kb on + strand, within BACOVA_00787at 474.522 kb on + strand, within BACOVA_00787at 474.522 kb on + strand, within BACOVA_00787at 474.523 kb on - strand, within BACOVA_00787at 474.543 kb on + strand, within BACOVA_00787at 474.547 kb on + strand, within BACOVA_00787at 474.547 kb on + strand, within BACOVA_00787at 474.578 kb on + strand, within BACOVA_00787at 474.582 kb on + strand, within BACOVA_00787at 474.583 kb on - strand, within BACOVA_00787at 474.585 kb on - strand, within BACOVA_00787at 474.586 kb on + strand, within BACOVA_00787at 474.587 kb on - strand, within BACOVA_00787at 474.590 kb on + strand, within BACOVA_00787at 474.590 kb on + strand, within BACOVA_00787at 474.678 kb on - strand, within BACOVA_00787at 474.759 kb on + strand, within BACOVA_00787at 474.844 kb on - strand, within BACOVA_00787at 474.887 kb on - strand, within BACOVA_00787at 474.987 kb on - strand, within BACOVA_00787at 475.031 kb on + strand, within BACOVA_00787at 475.078 kb on + strand, within BACOVA_00787at 475.102 kb on - strand, within BACOVA_00787at 475.152 kb on - strand, within BACOVA_00787at 475.154 kb on + strand, within BACOVA_00787at 475.164 kb on - strand, within BACOVA_00787at 475.164 kb on - strand, within BACOVA_00787at 475.198 kb on - strand, within BACOVA_00787at 475.217 kb on + strand, within BACOVA_00787at 475.218 kb on - strand, within BACOVA_00787at 475.218 kb on - strand, within BACOVA_00787at 475.242 kb on - strand, within BACOVA_00787at 475.270 kb on + strand, within BACOVA_00787at 475.300 kb on - strand, within BACOVA_00787at 475.303 kb on + strand, within BACOVA_00787at 475.304 kb on - strand, within BACOVA_00787at 475.439 kb on + strand, within BACOVA_00787at 475.482 kb on - strand, within BACOVA_00787at 475.486 kb on + strand, within BACOVA_00787at 475.493 kb on + strand, within BACOVA_00787at 475.493 kb on + strand, within BACOVA_00787at 475.653 kb on - strand, within BACOVA_00787at 475.682 kb on + strand, within BACOVA_00787at 475.683 kb on - strand, within BACOVA_00787at 475.710 kb on + strand, within BACOVA_00787at 475.824 kb on + strand, within BACOVA_00787at 475.824 kb on + strand, within BACOVA_00787at 475.851 kb on - strand, within BACOVA_00787at 475.864 kb on - strand, within BACOVA_00787at 475.864 kb on - strand, within BACOVA_00787at 475.868 kb on - strand, within BACOVA_00787at 475.871 kb on + strand, within BACOVA_00787at 475.878 kb on - strand, within BACOVA_00787at 475.912 kb on + strand, within BACOVA_00787at 476.018 kb on + strand, within BACOVA_00787at 476.019 kb on - strand, within BACOVA_00787at 476.031 kb on - strand, within BACOVA_00787at 476.031 kb on - strand, within BACOVA_00787at 476.031 kb on - strand, within BACOVA_00787at 476.031 kb on - strand, within BACOVA_00787at 476.032 kb on + strand, within BACOVA_00787at 476.032 kb on + strand, within BACOVA_00787at 476.032 kb on + strand, within BACOVA_00787at 476.033 kb on - strand, within BACOVA_00787at 476.034 kb on + strand, within BACOVA_00787at 476.034 kb on + strand, within BACOVA_00787at 476.034 kb on + strand, within BACOVA_00787at 476.041 kb on + strand, within BACOVA_00787at 476.050 kb on + strand, within BACOVA_00787at 476.051 kb on - strand, within BACOVA_00787at 476.084 kb on + strand, within BACOVA_00787at 476.164 kb on + strand, within BACOVA_00787at 476.165 kb on - strand, within BACOVA_00787at 476.169 kb on - strand, within BACOVA_00787at 476.169 kb on - strand, within BACOVA_00787at 476.173 kb on + strand, within BACOVA_00787at 476.174 kb on - strand, within BACOVA_00787at 476.278 kb on + strand, within BACOVA_00787at 476.325 kb on - strand, within BACOVA_00787at 476.327 kb on + strand, within BACOVA_00787at 476.327 kb on + strand, within BACOVA_00787at 476.328 kb on - strand, within BACOVA_00787at 476.328 kb on - strand, within BACOVA_00787at 476.328 kb on - strand, within BACOVA_00787at 476.334 kb on + strand, within BACOVA_00787at 476.335 kb on - strand, within BACOVA_00787at 476.463 kb on + strand, within BACOVA_00787at 476.552 kb on + strand, within BACOVA_00787at 476.558 kb on + strand, within BACOVA_00787at 476.560 kb on + strand, within BACOVA_00787at 476.560 kb on + strand, within BACOVA_00787at 476.562 kb on + strand, within BACOVA_00787at 476.576 kb on + strand, within BACOVA_00787at 476.726 kb on + strand, within BACOVA_00787at 476.726 kb on + strand, within BACOVA_00787at 476.795 kb on + strand, within BACOVA_00787at 476.796 kb on - strand, within BACOVA_00787at 476.827 kb on + strand, within BACOVA_00787at 476.827 kb on + strand, within BACOVA_00787at 476.827 kb on + strand, within BACOVA_00787at 476.828 kb on - strand, within BACOVA_00787at 476.862 kb on + strand, within BACOVA_00787at 476.872 kb on + strand, within BACOVA_00787at 476.882 kb on - strand, within BACOVA_00787at 476.882 kb on - strand, within BACOVA_00787at 476.886 kb on + strand, within BACOVA_00787at 476.915 kb on + strand, within BACOVA_00787at 476.953 kb on + strand, within BACOVA_00787at 476.959 kb on + strand, within BACOVA_00787at 476.959 kb on + strand, within BACOVA_00787at 476.960 kb on - strand, within BACOVA_00787at 476.983 kb on + strand, within BACOVA_00787at 476.984 kb on - strand, within BACOVA_00787at 477.015 kb on - strand, within BACOVA_00787at 477.015 kb on - strand, within BACOVA_00787at 477.082 kb on + strand, within BACOVA_00787at 477.082 kb on + strand, within BACOVA_00787at 477.082 kb on + strand, within BACOVA_00787at 477.170 kb on + strand, within BACOVA_00787at 477.174 kb on + strand, within BACOVA_00787at 477.239 kb on + strand, within BACOVA_00787at 477.276 kb on + strand, within BACOVA_00787at 477.277 kb on - strand, within BACOVA_00787at 477.315 kb on - strand, within BACOVA_00787at 477.367 kb on + strandat 477.367 kb on + strandat 477.405 kb on + strandat 477.406 kb on - strandat 477.515 kb on - strandat 477.530 kb on + strandat 477.557 kb on + strandat 477.557 kb on + strandat 477.558 kb on - strandat 477.638 kb on + strandat 477.657 kb on + strandat 477.658 kb on - strandat 477.714 kb on + strandat 477.756 kb on + strandat 477.764 kb on + strandat 477.765 kb on - strandat 477.784 kb on + strandat 477.785 kb on - strandat 477.807 kb on + strandat 477.810 kb on + strandat 477.813 kb on + strandat 477.814 kb on - strandat 477.814 kb on - strandat 477.841 kb on + strandat 477.842 kb on - strandat 477.844 kb on - strandat 477.853 kb on + strandat 477.894 kb on + strandat 477.902 kb on + strandat 477.964 kb on + strandat 477.965 kb on - strandat 477.969 kb on + strandat 477.973 kb on - strandat 478.008 kb on - strandat 478.087 kb on + strandat 478.212 kb on - strandat 478.306 kb on + strand, within BACOVA_00788at 478.309 kb on + strand, within BACOVA_00788at 478.355 kb on - strand, within BACOVA_00788at 478.409 kb on + strand, within BACOVA_00788at 478.410 kb on - strand, within BACOVA_00788at 478.410 kb on - strand, within BACOVA_00788at 478.457 kb on - strand, within BACOVA_00788at 478.460 kb on + strand, within BACOVA_00788at 478.577 kb on - strand, within BACOVA_00788at 478.579 kb on - strand, within BACOVA_00788at 478.583 kb on - strand, within BACOVA_00788at 478.583 kb on - strand, within BACOVA_00788at 478.693 kb on - strand, within BACOVA_00788at 478.693 kb on - strand, within BACOVA_00788at 478.733 kb on + strand, within BACOVA_00788at 478.733 kb on + strand, within BACOVA_00788at 478.733 kb on + strand, within BACOVA_00788at 478.734 kb on - strand, within BACOVA_00788at 478.775 kb on + strand, within BACOVA_00788

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Per-strain Table

Position Strand Gene LocusTag Fraction Yeast Extract 2.5 mg/mL (C) complex media
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472,534 + BACOVA_00786 0.52 -1.4
472,541 - BACOVA_00786 0.52 -0.7
472,576 - BACOVA_00786 0.54 -0.2
472,579 + BACOVA_00786 0.54 -1.0
472,615 + BACOVA_00786 0.57 +0.6
472,622 + BACOVA_00786 0.57 +1.1
472,681 + BACOVA_00786 0.61 +1.2
472,681 + BACOVA_00786 0.61 +0.7
472,682 - BACOVA_00786 0.61 -1.4
472,900 - BACOVA_00786 0.74 -0.1
472,911 - BACOVA_00786 0.74 -0.8
472,946 + BACOVA_00786 0.76 -1.8
472,960 + BACOVA_00786 0.77 -0.0
473,063 - BACOVA_00786 0.83 +0.7
473,065 - BACOVA_00786 0.83 -2.2
473,143 + BACOVA_00786 0.88 -0.6
473,268 - -1.9
473,294 + -0.6
473,358 - -1.8
473,361 + -1.1
473,362 - -0.5
473,369 + +1.4
473,397 - +0.6
473,477 + -0.1
473,478 - -0.6
473,478 - +1.0
473,479 + +1.7
473,480 - -0.3
473,482 + +0.7
473,556 - +0.6
473,661 + -2.1
473,676 - +0.1
473,863 + BACOVA_00787 0.10 -0.0
473,864 - BACOVA_00787 0.10 -0.0
473,864 - BACOVA_00787 0.10 -0.8
473,874 - BACOVA_00787 0.11 +0.3
473,966 + BACOVA_00787 0.13 +0.4
474,061 + BACOVA_00787 0.15 +0.6
474,062 - BACOVA_00787 0.15 -0.5
474,095 + BACOVA_00787 0.16 -1.0
474,139 - BACOVA_00787 0.17 -0.2
474,282 - BACOVA_00787 0.20 -0.8
474,293 - BACOVA_00787 0.20 +1.4
474,451 + BACOVA_00787 0.24 +0.7
474,451 + BACOVA_00787 0.24 -0.1
474,522 + BACOVA_00787 0.25 +0.0
474,522 + BACOVA_00787 0.25 -0.2
474,523 - BACOVA_00787 0.25 -0.6
474,543 + BACOVA_00787 0.26 +1.1
474,547 + BACOVA_00787 0.26 -0.1
474,547 + BACOVA_00787 0.26 +0.1
474,578 + BACOVA_00787 0.27 -0.9
474,582 + BACOVA_00787 0.27 +0.7
474,583 - BACOVA_00787 0.27 -0.0
474,585 - BACOVA_00787 0.27 -0.0
474,586 + BACOVA_00787 0.27 +0.7
474,587 - BACOVA_00787 0.27 -0.2
474,590 + BACOVA_00787 0.27 +1.7
474,590 + BACOVA_00787 0.27 -0.2
474,678 - BACOVA_00787 0.29 -0.5
474,759 + BACOVA_00787 0.31 +0.8
474,844 - BACOVA_00787 0.33 -1.3
474,887 - BACOVA_00787 0.34 -0.2
474,987 - BACOVA_00787 0.36 +0.2
475,031 + BACOVA_00787 0.37 +0.0
475,078 + BACOVA_00787 0.38 -0.1
475,102 - BACOVA_00787 0.39 +0.6
475,152 - BACOVA_00787 0.40 -0.9
475,154 + BACOVA_00787 0.40 +1.2
475,164 - BACOVA_00787 0.40 -0.3
475,164 - BACOVA_00787 0.40 +1.1
475,198 - BACOVA_00787 0.41 -0.3
475,217 + BACOVA_00787 0.41 -1.1
475,218 - BACOVA_00787 0.41 +0.5
475,218 - BACOVA_00787 0.41 +0.7
475,242 - BACOVA_00787 0.42 +1.1
475,270 + BACOVA_00787 0.42 +0.5
475,300 - BACOVA_00787 0.43 +0.2
475,303 + BACOVA_00787 0.43 -0.9
475,304 - BACOVA_00787 0.43 +0.2
475,439 + BACOVA_00787 0.46 -2.0
475,482 - BACOVA_00787 0.47 +0.1
475,486 + BACOVA_00787 0.47 +0.5
475,493 + BACOVA_00787 0.48 -1.2
475,493 + BACOVA_00787 0.48 -0.9
475,653 - BACOVA_00787 0.51 -0.7
475,682 + BACOVA_00787 0.52 -0.3
475,683 - BACOVA_00787 0.52 +0.4
475,710 + BACOVA_00787 0.52 +0.5
475,824 + BACOVA_00787 0.55 +0.7
475,824 + BACOVA_00787 0.55 +0.4
475,851 - BACOVA_00787 0.56 -0.7
475,864 - BACOVA_00787 0.56 -1.7
475,864 - BACOVA_00787 0.56 +0.9
475,868 - BACOVA_00787 0.56 -0.9
475,871 + BACOVA_00787 0.56 +0.2
475,878 - BACOVA_00787 0.56 -0.3
475,912 + BACOVA_00787 0.57 +0.0
476,018 + BACOVA_00787 0.59 -2.0
476,019 - BACOVA_00787 0.60 +0.3
476,031 - BACOVA_00787 0.60 -1.6
476,031 - BACOVA_00787 0.60 -0.8
476,031 - BACOVA_00787 0.60 +0.1
476,031 - BACOVA_00787 0.60 -0.4
476,032 + BACOVA_00787 0.60 -2.0
476,032 + BACOVA_00787 0.60 -1.6
476,032 + BACOVA_00787 0.60 -0.1
476,033 - BACOVA_00787 0.60 +1.3
476,034 + BACOVA_00787 0.60 +1.3
476,034 + BACOVA_00787 0.60 -0.4
476,034 + BACOVA_00787 0.60 -1.5
476,041 + BACOVA_00787 0.60 +0.9
476,050 + BACOVA_00787 0.60 -0.4
476,051 - BACOVA_00787 0.60 -2.3
476,084 + BACOVA_00787 0.61 +1.0
476,164 + BACOVA_00787 0.63 -1.3
476,165 - BACOVA_00787 0.63 -0.4
476,169 - BACOVA_00787 0.63 -1.3
476,169 - BACOVA_00787 0.63 +0.0
476,173 + BACOVA_00787 0.63 +1.4
476,174 - BACOVA_00787 0.63 +0.1
476,278 + BACOVA_00787 0.65 -0.6
476,325 - BACOVA_00787 0.66 -0.6
476,327 + BACOVA_00787 0.67 +0.1
476,327 + BACOVA_00787 0.67 +0.2
476,328 - BACOVA_00787 0.67 -0.5
476,328 - BACOVA_00787 0.67 -1.0
476,328 - BACOVA_00787 0.67 -1.4
476,334 + BACOVA_00787 0.67 -0.0
476,335 - BACOVA_00787 0.67 +0.4
476,463 + BACOVA_00787 0.70 +1.3
476,552 + BACOVA_00787 0.72 -0.0
476,558 + BACOVA_00787 0.72 -0.2
476,560 + BACOVA_00787 0.72 -0.8
476,560 + BACOVA_00787 0.72 -0.0
476,562 + BACOVA_00787 0.72 -0.3
476,576 + BACOVA_00787 0.72 +0.6
476,726 + BACOVA_00787 0.76 -1.9
476,726 + BACOVA_00787 0.76 -0.2
476,795 + BACOVA_00787 0.77 +0.5
476,796 - BACOVA_00787 0.77 +0.4
476,827 + BACOVA_00787 0.78 +1.9
476,827 + BACOVA_00787 0.78 -1.0
476,827 + BACOVA_00787 0.78 +1.2
476,828 - BACOVA_00787 0.78 -2.2
476,862 + BACOVA_00787 0.79 -0.3
476,872 + BACOVA_00787 0.79 -0.3
476,882 - BACOVA_00787 0.79 +0.9
476,882 - BACOVA_00787 0.79 -0.5
476,886 + BACOVA_00787 0.79 -0.1
476,915 + BACOVA_00787 0.80 +1.1
476,953 + BACOVA_00787 0.81 -0.4
476,959 + BACOVA_00787 0.81 +0.1
476,959 + BACOVA_00787 0.81 -0.8
476,960 - BACOVA_00787 0.81 -1.1
476,983 + BACOVA_00787 0.81 -0.1
476,984 - BACOVA_00787 0.81 +1.1
477,015 - BACOVA_00787 0.82 +0.0
477,015 - BACOVA_00787 0.82 -0.8
477,082 + BACOVA_00787 0.84 +0.2
477,082 + BACOVA_00787 0.84 +0.2
477,082 + BACOVA_00787 0.84 +1.4
477,170 + BACOVA_00787 0.86 +0.4
477,174 + BACOVA_00787 0.86 +0.2
477,239 + BACOVA_00787 0.87 -0.3
477,276 + BACOVA_00787 0.88 -0.7
477,277 - BACOVA_00787 0.88 +0.0
477,315 - BACOVA_00787 0.89 -0.3
477,367 + +0.3
477,367 + +0.4
477,405 + -1.5
477,406 - +0.6
477,515 - -1.5
477,530 + +0.5
477,557 + -2.0
477,557 + +0.7
477,558 - +0.7
477,638 + +1.2
477,657 + +1.0
477,658 - +0.2
477,714 + -0.5
477,756 + -0.3
477,764 + +0.4
477,765 - +0.2
477,784 + +0.7
477,785 - +0.5
477,807 + -1.3
477,810 + +0.7
477,813 + +0.3
477,814 - +0.2
477,814 - +0.2
477,841 + -0.2
477,842 - -0.5
477,844 - +1.0
477,853 + +0.7
477,894 + -0.6
477,902 + -0.9
477,964 + -0.9
477,965 - +1.2
477,969 + -0.1
477,973 - -1.5
478,008 - -0.3
478,087 + +0.5
478,212 - -0.5
478,306 + BACOVA_00788 0.13 -1.0
478,309 + BACOVA_00788 0.13 +0.6
478,355 - BACOVA_00788 0.14 +0.7
478,409 + BACOVA_00788 0.16 -0.2
478,410 - BACOVA_00788 0.17 -0.1
478,410 - BACOVA_00788 0.17 -0.1
478,457 - BACOVA_00788 0.18 -0.6
478,460 + BACOVA_00788 0.18 -1.1
478,577 - BACOVA_00788 0.23 -0.0
478,579 - BACOVA_00788 0.23 +0.9
478,583 - BACOVA_00788 0.23 -1.5
478,583 - BACOVA_00788 0.23 -1.5
478,693 - BACOVA_00788 0.27 -0.0
478,693 - BACOVA_00788 0.27 -1.4
478,733 + BACOVA_00788 0.29 -0.8
478,733 + BACOVA_00788 0.29 -0.1
478,733 + BACOVA_00788 0.29 -1.4
478,734 - BACOVA_00788 0.29 -1.0
478,775 + BACOVA_00788 0.30 +0.8

Or see this region's nucleotide sequence