Experiment: BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EFB2_00732 and EFB2_00733 are separated by 133 nucleotides EFB2_00733 and EFB2_00734 are separated by 62 nucleotides EFB2_00734 and EFB2_00735 overlap by 4 nucleotides
EFB2_00732: EFB2_00732 - hypothetical protein, at 741,074 to 742,144
_00732
EFB2_00733: EFB2_00733 - Inner membrane transporter YgjI, at 742,278 to 743,711
_00733
EFB2_00734: EFB2_00734 - Evolved beta-galactosidase subunit beta, at 743,774 to 744,223
_00734
EFB2_00735: EFB2_00735 - Evolved beta-galactosidase subunit alpha, at 744,220 to 747,312
_00735
Position (kb) 742
743
744 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.294 kb on + strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.295 kb on - strand, within EFB2_00732 at 741.359 kb on - strand, within EFB2_00732 at 741.386 kb on - strand, within EFB2_00732 at 741.391 kb on + strand, within EFB2_00732 at 741.392 kb on - strand, within EFB2_00732 at 741.408 kb on + strand, within EFB2_00732 at 741.408 kb on + strand, within EFB2_00732 at 741.408 kb on + strand, within EFB2_00732 at 741.408 kb on + strand, within EFB2_00732 at 741.408 kb on + strand, within EFB2_00732 at 741.408 kb on + strand, within EFB2_00732 at 741.409 kb on - strand, within EFB2_00732 at 741.409 kb on - strand, within EFB2_00732 at 741.409 kb on - strand, within EFB2_00732 at 741.409 kb on - strand, within EFB2_00732 at 741.409 kb on - strand, within EFB2_00732 at 741.457 kb on + strand, within EFB2_00732 at 741.457 kb on + strand, within EFB2_00732 at 741.457 kb on + strand, within EFB2_00732 at 741.457 kb on + strand, within EFB2_00732 at 741.457 kb on + strand, within EFB2_00732 at 741.457 kb on + strand, within EFB2_00732 at 741.457 kb on + strand, within EFB2_00732 at 741.457 kb on + strand, within EFB2_00732 at 741.457 kb on + strand, within EFB2_00732 at 741.458 kb on - strand, within EFB2_00732 at 741.458 kb on - strand, within EFB2_00732 at 741.474 kb on + strand, within EFB2_00732 at 741.474 kb on + strand, within EFB2_00732 at 741.475 kb on - strand, within EFB2_00732 at 741.475 kb on - strand, within EFB2_00732 at 741.483 kb on + strand, within EFB2_00732 at 741.483 kb on + strand, within EFB2_00732 at 741.483 kb on + strand, within EFB2_00732 at 741.483 kb on + strand, within EFB2_00732 at 741.483 kb on + strand, within EFB2_00732 at 741.484 kb on - strand, within EFB2_00732 at 741.484 kb on - strand, within EFB2_00732 at 741.504 kb on + strand, within EFB2_00732 at 741.504 kb on + strand, within EFB2_00732 at 741.504 kb on + strand, within EFB2_00732 at 741.504 kb on + strand, within EFB2_00732 at 741.504 kb on + strand, within EFB2_00732 at 741.505 kb on - strand, within EFB2_00732 at 741.505 kb on - strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.510 kb on + strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.511 kb on - strand, within EFB2_00732 at 741.522 kb on + strand, within EFB2_00732 at 741.522 kb on + strand, within EFB2_00732 at 741.531 kb on + strand, within EFB2_00732 at 741.531 kb on + strand, within EFB2_00732 at 741.531 kb on + strand, within EFB2_00732 at 741.531 kb on + strand, within EFB2_00732 at 741.531 kb on + strand, within EFB2_00732 at 741.531 kb on + strand, within EFB2_00732 at 741.531 kb on + strand, within EFB2_00732 at 741.531 kb on + strand, within EFB2_00732 at 741.531 kb on + strand, within EFB2_00732 at 741.532 kb on - strand, within EFB2_00732 at 741.532 kb on - strand, within EFB2_00732 at 741.532 kb on - strand, within EFB2_00732 at 741.532 kb on - strand, within EFB2_00732 at 741.532 kb on - strand, within EFB2_00732 at 741.532 kb on - strand, within EFB2_00732 at 741.532 kb on - strand, within EFB2_00732 at 741.545 kb on + strand, within EFB2_00732 at 741.545 kb on + strand, within EFB2_00732 at 741.546 kb on - strand, within EFB2_00732 at 741.595 kb on + strand, within EFB2_00732 at 741.595 kb on + strand, within EFB2_00732 at 741.595 kb on + strand, within EFB2_00732 at 741.595 kb on + strand, within EFB2_00732 at 741.595 kb on + strand, within EFB2_00732 at 741.595 kb on + strand, within EFB2_00732 at 741.595 kb on + strand, within EFB2_00732 at 741.595 kb on + strand, within EFB2_00732 at 741.596 kb on - strand, within EFB2_00732 at 741.596 kb on - strand, within EFB2_00732 at 741.596 kb on - strand, within EFB2_00732 at 741.596 kb on - strand, within EFB2_00732 at 741.596 kb on - strand, within EFB2_00732 at 741.596 kb on - strand, within EFB2_00732 at 741.596 kb on - strand, within EFB2_00732 at 741.597 kb on + strand, within EFB2_00732 at 741.598 kb on - strand, within EFB2_00732 at 741.598 kb on - strand, within EFB2_00732 at 741.598 kb on - strand, within EFB2_00732 at 741.598 kb on - strand, within EFB2_00732 at 741.615 kb on - strand, within EFB2_00732 at 741.615 kb on - strand, within EFB2_00732 at 741.623 kb on + strand, within EFB2_00732 at 741.623 kb on + strand, within EFB2_00732 at 741.623 kb on + strand, within EFB2_00732 at 741.623 kb on + strand, within EFB2_00732 at 741.623 kb on + strand, within EFB2_00732 at 741.624 kb on - strand, within EFB2_00732 at 741.640 kb on + strand, within EFB2_00732 at 741.640 kb on + strand, within EFB2_00732 at 741.640 kb on + strand, within EFB2_00732 at 741.640 kb on + strand, within EFB2_00732 at 741.640 kb on + strand, within EFB2_00732 at 741.640 kb on + strand, within EFB2_00732 at 741.640 kb on + strand, within EFB2_00732 at 741.641 kb on - strand, within EFB2_00732 at 741.641 kb on - strand, within EFB2_00732 at 741.641 kb on - strand, within EFB2_00732 at 741.641 kb on - strand, within EFB2_00732 at 741.641 kb on - strand, within EFB2_00732 at 741.666 kb on + strand, within EFB2_00732 at 741.666 kb on + strand, within EFB2_00732 at 741.667 kb on - strand, within EFB2_00732 at 741.760 kb on + strand, within EFB2_00732 at 741.761 kb on - strand, within EFB2_00732 at 741.761 kb on - strand, within EFB2_00732 at 741.765 kb on + strand, within EFB2_00732 at 741.774 kb on + strand, within EFB2_00732 at 741.774 kb on + strand, within EFB2_00732 at 741.774 kb on + strand, within EFB2_00732 at 741.811 kb on + strand, within EFB2_00732 at 741.811 kb on + strand, within EFB2_00732 at 741.811 kb on + strand, within EFB2_00732 at 741.811 kb on + strand, within EFB2_00732 at 741.811 kb on + strand, within EFB2_00732 at 741.812 kb on - strand, within EFB2_00732 at 741.812 kb on - strand, within EFB2_00732 at 741.894 kb on + strand, within EFB2_00732 at 741.894 kb on + strand, within EFB2_00732 at 741.894 kb on + strand, within EFB2_00732 at 741.894 kb on + strand, within EFB2_00732 at 741.894 kb on + strand, within EFB2_00732 at 741.894 kb on + strand, within EFB2_00732 at 741.894 kb on + strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.895 kb on - strand, within EFB2_00732 at 741.919 kb on + strand, within EFB2_00732 at 741.919 kb on + strand, within EFB2_00732 at 741.919 kb on + strand, within EFB2_00732 at 741.919 kb on + strand, within EFB2_00732 at 741.920 kb on - strand, within EFB2_00732 at 741.920 kb on - strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.921 kb on + strand, within EFB2_00732 at 741.922 kb on - strand, within EFB2_00732 at 741.922 kb on - strand, within EFB2_00732 at 741.922 kb on - strand, within EFB2_00732 at 741.922 kb on - strand, within EFB2_00732 at 741.922 kb on - strand, within EFB2_00732 at 741.922 kb on - strand, within EFB2_00732 at 741.922 kb on - strand, within EFB2_00732 at 741.936 kb on + strand, within EFB2_00732 at 741.936 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.940 kb on + strand, within EFB2_00732 at 741.941 kb on - strand, within EFB2_00732 at 741.941 kb on - strand, within EFB2_00732 at 741.941 kb on - strand, within EFB2_00732 at 741.941 kb on - strand, within EFB2_00732 at 741.941 kb on - strand, within EFB2_00732 at 741.941 kb on - strand, within EFB2_00732 at 741.941 kb on - strand, within EFB2_00732 at 741.941 kb on - strand, within EFB2_00732 at 741.941 kb on - strand, within EFB2_00732 at 741.941 kb on - strand, within EFB2_00732 at 741.941 kb on - strand, within EFB2_00732 at 741.960 kb on - strand, within EFB2_00732 at 741.960 kb on - strand, within EFB2_00732 at 741.967 kb on + strand, within EFB2_00732 at 741.967 kb on + strand, within EFB2_00732 at 741.967 kb on + strand, within EFB2_00732 at 741.967 kb on + strand, within EFB2_00732 at 741.967 kb on + strand, within EFB2_00732 at 741.968 kb on - strand, within EFB2_00732 at 741.968 kb on - strand, within EFB2_00732 at 741.969 kb on + strand, within EFB2_00732 at 741.969 kb on + strand, within EFB2_00732 at 741.969 kb on + strand, within EFB2_00732 at 741.969 kb on + strand, within EFB2_00732 at 741.969 kb on + strand, within EFB2_00732 at 741.969 kb on + strand, within EFB2_00732 at 741.969 kb on + strand, within EFB2_00732 at 741.970 kb on - strand, within EFB2_00732 at 741.970 kb on - strand, within EFB2_00732 at 741.970 kb on - strand, within EFB2_00732 at 741.970 kb on - strand, within EFB2_00732 at 741.970 kb on - strand, within EFB2_00732 at 741.970 kb on - strand, within EFB2_00732 at 741.984 kb on - strand, within EFB2_00732 at 741.984 kb on - strand, within EFB2_00732 at 741.984 kb on - strand, within EFB2_00732 at 742.092 kb on + strand at 742.112 kb on + strand at 742.112 kb on + strand at 742.112 kb on + strand at 742.112 kb on + strand at 742.112 kb on + strand at 742.112 kb on + strand at 742.112 kb on + strand at 742.112 kb on + strand at 742.112 kb on + strand at 742.112 kb on + strand at 742.112 kb on + strand at 742.113 kb on - strand at 742.113 kb on - strand at 742.113 kb on - strand at 742.113 kb on - strand at 742.137 kb on - strand at 742.150 kb on + strand at 742.151 kb on - strand at 742.183 kb on + strand at 742.184 kb on - strand at 742.184 kb on - strand at 742.184 kb on - strand at 742.184 kb on - strand at 742.184 kb on - strand at 742.191 kb on + strand at 742.192 kb on - strand at 742.192 kb on - strand at 742.192 kb on - strand at 742.271 kb on - strand at 742.311 kb on - strand at 742.339 kb on - strand at 742.340 kb on + strand at 742.340 kb on + strand at 742.340 kb on + strand at 742.341 kb on - strand at 742.341 kb on - strand at 742.342 kb on + strand at 742.343 kb on - strand at 742.343 kb on - strand at 742.343 kb on - strand at 742.347 kb on - strand at 742.347 kb on - strand at 742.351 kb on + strand at 742.379 kb on + strand at 742.380 kb on - strand at 742.380 kb on - strand at 742.380 kb on - strand at 742.385 kb on + strand at 742.419 kb on - strand at 742.465 kb on - strand, within EFB2_00733 at 742.610 kb on + strand, within EFB2_00733 at 742.610 kb on + strand, within EFB2_00733 at 742.610 kb on + strand, within EFB2_00733 at 742.610 kb on + strand, within EFB2_00733 at 742.611 kb on - strand, within EFB2_00733 at 742.611 kb on - strand, within EFB2_00733 at 742.611 kb on - strand, within EFB2_00733 at 742.611 kb on - strand, within EFB2_00733 at 742.613 kb on + strand, within EFB2_00733 at 742.613 kb on + strand, within EFB2_00733 at 742.614 kb on - strand, within EFB2_00733 at 742.614 kb on - strand, within EFB2_00733 at 742.614 kb on - strand, within EFB2_00733 at 742.616 kb on + strand, within EFB2_00733 at 742.617 kb on - strand, within EFB2_00733 at 742.617 kb on - strand, within EFB2_00733 at 742.617 kb on - strand, within EFB2_00733 at 742.619 kb on + strand, within EFB2_00733 at 742.619 kb on + strand, within EFB2_00733 at 742.619 kb on + strand, within EFB2_00733 at 742.619 kb on + strand, within EFB2_00733 at 742.619 kb on + strand, within EFB2_00733 at 742.619 kb on + strand, within EFB2_00733 at 742.620 kb on - strand, within EFB2_00733 at 742.620 kb on - strand, within EFB2_00733 at 742.620 kb on - strand, within EFB2_00733 at 742.620 kb on - strand, within EFB2_00733 at 742.620 kb on - strand, within EFB2_00733 at 742.622 kb on + strand, within EFB2_00733 at 742.622 kb on + strand, within EFB2_00733 at 742.622 kb on + strand, within EFB2_00733 at 742.623 kb on - strand, within EFB2_00733 at 742.623 kb on - strand, within EFB2_00733 at 742.623 kb on - strand, within EFB2_00733 at 742.623 kb on - strand, within EFB2_00733 at 742.623 kb on - strand, within EFB2_00733 at 742.623 kb on - strand, within EFB2_00733 at 742.644 kb on - strand, within EFB2_00733 at 742.748 kb on + strand, within EFB2_00733 at 742.876 kb on - strand, within EFB2_00733 at 742.885 kb on + strand, within EFB2_00733 at 742.905 kb on + strand, within EFB2_00733 at 742.905 kb on + strand, within EFB2_00733 at 742.905 kb on + strand, within EFB2_00733 at 742.905 kb on + strand, within EFB2_00733 at 742.905 kb on + strand, within EFB2_00733 at 742.905 kb on + strand, within EFB2_00733 at 742.905 kb on + strand, within EFB2_00733 at 742.906 kb on - strand, within EFB2_00733 at 742.906 kb on - strand, within EFB2_00733 at 742.906 kb on - strand, within EFB2_00733 at 742.906 kb on - strand, within EFB2_00733 at 742.906 kb on - strand, within EFB2_00733 at 742.906 kb on - strand, within EFB2_00733 at 742.981 kb on + strand, within EFB2_00733 at 742.981 kb on + strand, within EFB2_00733 at 742.981 kb on + strand, within EFB2_00733 at 742.981 kb on + strand, within EFB2_00733 at 742.981 kb on + strand, within EFB2_00733 at 742.981 kb on + strand, within EFB2_00733 at 742.981 kb on + strand, within EFB2_00733 at 742.981 kb on + strand, within EFB2_00733 at 742.981 kb on + strand, within EFB2_00733 at 742.981 kb on + strand, within EFB2_00733 at 742.982 kb on - strand, within EFB2_00733 at 742.982 kb on - strand, within EFB2_00733 at 742.982 kb on - strand, within EFB2_00733 at 742.986 kb on + strand, within EFB2_00733 at 742.986 kb on + strand, within EFB2_00733 at 742.986 kb on + strand, within EFB2_00733 at 742.986 kb on + strand, within EFB2_00733 at 742.986 kb on + strand, within EFB2_00733 at 742.986 kb on + strand, within EFB2_00733 at 742.986 kb on + strand, within EFB2_00733 at 742.987 kb on - strand, within EFB2_00733 at 743.059 kb on + strand, within EFB2_00733 at 743.059 kb on + strand, within EFB2_00733 at 743.059 kb on + strand, within EFB2_00733 at 743.060 kb on - strand, within EFB2_00733 at 743.060 kb on - strand, within EFB2_00733 at 743.060 kb on - strand, within EFB2_00733 at 743.175 kb on + strand, within EFB2_00733 at 743.175 kb on + strand, within EFB2_00733 at 743.175 kb on + strand, within EFB2_00733 at 743.176 kb on - strand, within EFB2_00733 at 743.195 kb on + strand, within EFB2_00733 at 743.195 kb on + strand, within EFB2_00733 at 743.195 kb on + strand, within EFB2_00733 at 743.195 kb on + strand, within EFB2_00733 at 743.195 kb on + strand, within EFB2_00733 at 743.196 kb on - strand, within EFB2_00733 at 743.196 kb on - strand, within EFB2_00733 at 743.196 kb on - strand, within EFB2_00733 at 743.205 kb on + strand, within EFB2_00733 at 743.206 kb on - strand, within EFB2_00733 at 743.206 kb on - strand, within EFB2_00733 at 743.212 kb on + strand, within EFB2_00733 at 743.212 kb on + strand, within EFB2_00733 at 743.213 kb on - strand, within EFB2_00733 at 743.318 kb on + strand, within EFB2_00733 at 743.319 kb on - strand, within EFB2_00733 at 743.319 kb on - strand, within EFB2_00733 at 743.319 kb on - strand, within EFB2_00733 at 743.319 kb on - strand, within EFB2_00733 at 743.324 kb on + strand, within EFB2_00733 at 743.348 kb on + strand, within EFB2_00733 at 743.348 kb on + strand, within EFB2_00733 at 743.348 kb on + strand, within EFB2_00733 at 743.348 kb on + strand, within EFB2_00733 at 743.348 kb on + strand, within EFB2_00733 at 743.349 kb on - strand, within EFB2_00733 at 743.349 kb on - strand, within EFB2_00733 at 743.351 kb on + strand, within EFB2_00733 at 743.351 kb on + strand, within EFB2_00733 at 743.351 kb on + strand, within EFB2_00733 at 743.351 kb on + strand, within EFB2_00733 at 743.351 kb on + strand, within EFB2_00733 at 743.351 kb on + strand, within EFB2_00733 at 743.351 kb on + strand, within EFB2_00733 at 743.352 kb on - strand, within EFB2_00733 at 743.352 kb on - strand, within EFB2_00733 at 743.352 kb on - strand, within EFB2_00733 at 743.352 kb on - strand, within EFB2_00733 at 743.352 kb on - strand, within EFB2_00733 at 743.352 kb on - strand, within EFB2_00733 at 743.352 kb on - strand, within EFB2_00733 at 743.352 kb on - strand, within EFB2_00733 at 743.352 kb on - strand, within EFB2_00733 at 743.353 kb on + strand, within EFB2_00733 at 743.353 kb on + strand, within EFB2_00733 at 743.353 kb on + strand, within EFB2_00733 at 743.354 kb on - strand, within EFB2_00733 at 743.354 kb on - strand, within EFB2_00733 at 743.354 kb on - strand, within EFB2_00733 at 743.354 kb on - strand, within EFB2_00733 at 743.354 kb on - strand, within EFB2_00733 at 743.354 kb on - strand, within EFB2_00733 at 743.354 kb on - strand, within EFB2_00733 at 743.354 kb on - strand, within EFB2_00733 at 743.374 kb on + strand, within EFB2_00733 at 743.374 kb on + strand, within EFB2_00733 at 743.375 kb on - strand, within EFB2_00733 at 743.375 kb on - strand, within EFB2_00733 at 743.375 kb on - strand, within EFB2_00733 at 743.383 kb on + strand, within EFB2_00733 at 743.383 kb on + strand, within EFB2_00733 at 743.383 kb on + strand, within EFB2_00733 at 743.384 kb on - strand, within EFB2_00733 at 743.384 kb on - strand, within EFB2_00733 at 743.384 kb on - strand, within EFB2_00733 at 743.384 kb on - strand, within EFB2_00733 at 743.384 kb on - strand, within EFB2_00733 at 743.384 kb on - strand, within EFB2_00733 at 743.384 kb on - strand, within EFB2_00733 at 743.384 kb on - strand, within EFB2_00733 at 743.400 kb on + strand, within EFB2_00733 at 743.437 kb on + strand, within EFB2_00733 at 743.437 kb on + strand, within EFB2_00733 at 743.437 kb on + strand, within EFB2_00733 at 743.437 kb on + strand, within EFB2_00733 at 743.437 kb on + strand, within EFB2_00733 at 743.437 kb on + strand, within EFB2_00733 at 743.437 kb on + strand, within EFB2_00733 at 743.437 kb on + strand, within EFB2_00733 at 743.438 kb on - strand, within EFB2_00733 at 743.438 kb on - strand, within EFB2_00733 at 743.438 kb on - strand, within EFB2_00733 at 743.438 kb on - strand, within EFB2_00733 at 743.438 kb on - strand, within EFB2_00733 at 743.441 kb on + strand, within EFB2_00733 at 743.441 kb on + strand, within EFB2_00733 at 743.441 kb on + strand, within EFB2_00733 at 743.441 kb on + strand, within EFB2_00733 at 743.441 kb on + strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.442 kb on - strand, within EFB2_00733 at 743.443 kb on + strand, within EFB2_00733 at 743.443 kb on + strand, within EFB2_00733 at 743.443 kb on + strand, within EFB2_00733 at 743.443 kb on + strand, within EFB2_00733 at 743.443 kb on + strand, within EFB2_00733 at 743.444 kb on - strand, within EFB2_00733 at 743.444 kb on - strand, within EFB2_00733 at 743.450 kb on + strand, within EFB2_00733 at 743.451 kb on - strand, within EFB2_00733 at 743.451 kb on - strand, within EFB2_00733 at 743.453 kb on + strand, within EFB2_00733 at 743.453 kb on + strand, within EFB2_00733 at 743.453 kb on + strand, within EFB2_00733 at 743.453 kb on + strand, within EFB2_00733 at 743.453 kb on + strand, within EFB2_00733 at 743.454 kb on - strand, within EFB2_00733 at 743.454 kb on - strand, within EFB2_00733 at 743.454 kb on - strand, within EFB2_00733 at 743.454 kb on - strand, within EFB2_00733 at 743.454 kb on - strand, within EFB2_00733 at 743.454 kb on - strand, within EFB2_00733 at 743.616 kb on - strand at 743.616 kb on - strand at 743.616 kb on - strand at 743.618 kb on + strand at 743.618 kb on + strand at 743.619 kb on - strand at 743.619 kb on - strand at 743.622 kb on - strand at 743.627 kb on + strand at 743.628 kb on - strand at 743.644 kb on + strand at 743.690 kb on + strand at 743.690 kb on + strand at 743.691 kb on - strand at 743.691 kb on - strand at 743.691 kb on - strand at 743.691 kb on - strand at 743.691 kb on - strand at 743.691 kb on - strand at 743.691 kb on - strand at 743.693 kb on + strand at 743.694 kb on - strand at 743.694 kb on - strand at 743.711 kb on + strand at 743.711 kb on + strand at 743.711 kb on + strand at 743.711 kb on + strand at 743.711 kb on + strand at 743.712 kb on - strand at 743.712 kb on - strand at 743.712 kb on - strand at 743.712 kb on - strand at 743.712 kb on - strand at 743.712 kb on - strand at 743.712 kb on - strand at 743.712 kb on - strand at 743.768 kb on + strand at 743.769 kb on - strand at 743.769 kb on - strand at 743.769 kb on - strand at 743.769 kb on - strand at 743.790 kb on + strand at 743.790 kb on + strand at 743.790 kb on + strand at 743.791 kb on - strand at 743.845 kb on + strand, within EFB2_00734 at 743.846 kb on - strand, within EFB2_00734 at 743.853 kb on + strand, within EFB2_00734 at 743.876 kb on - strand, within EFB2_00734 at 743.921 kb on + strand, within EFB2_00734 at 743.922 kb on - strand, within EFB2_00734 at 743.922 kb on - strand, within EFB2_00734 at 743.925 kb on + strand, within EFB2_00734 at 743.925 kb on + strand, within EFB2_00734 at 743.925 kb on + strand, within EFB2_00734 at 743.926 kb on - strand, within EFB2_00734 at 743.949 kb on + strand, within EFB2_00734 at 743.952 kb on + strand, within EFB2_00734 at 743.953 kb on - strand, within EFB2_00734 at 743.953 kb on - strand, within EFB2_00734 at 743.960 kb on + strand, within EFB2_00734 at 743.960 kb on + strand, within EFB2_00734 at 743.960 kb on + strand, within EFB2_00734 at 743.961 kb on - strand, within EFB2_00734 at 743.961 kb on - strand, within EFB2_00734 at 743.966 kb on + strand, within EFB2_00734 at 743.966 kb on + strand, within EFB2_00734 at 743.966 kb on + strand, within EFB2_00734 at 743.966 kb on + strand, within EFB2_00734 at 743.967 kb on - strand, within EFB2_00734 at 743.986 kb on - strand, within EFB2_00734 at 743.986 kb on - strand, within EFB2_00734 at 744.012 kb on + strand, within EFB2_00734 at 744.012 kb on + strand, within EFB2_00734 at 744.012 kb on + strand, within EFB2_00734 at 744.012 kb on + strand, within EFB2_00734 at 744.013 kb on - strand, within EFB2_00734 at 744.013 kb on - strand, within EFB2_00734 at 744.015 kb on + strand, within EFB2_00734 at 744.015 kb on + strand, within EFB2_00734 at 744.015 kb on + strand, within EFB2_00734 at 744.015 kb on + strand, within EFB2_00734 at 744.015 kb on + strand, within EFB2_00734 at 744.015 kb on + strand, within EFB2_00734 at 744.015 kb on + strand, within EFB2_00734 at 744.016 kb on - strand, within EFB2_00734 at 744.016 kb on - strand, within EFB2_00734 at 744.050 kb on + strand, within EFB2_00734 at 744.050 kb on + strand, within EFB2_00734 at 744.050 kb on + strand, within EFB2_00734 at 744.050 kb on + strand, within EFB2_00734 at 744.050 kb on + strand, within EFB2_00734 at 744.051 kb on - strand, within EFB2_00734 at 744.051 kb on - strand, within EFB2_00734 at 744.051 kb on - strand, within EFB2_00734 at 744.051 kb on - strand, within EFB2_00734 at 744.051 kb on - strand, within EFB2_00734 at 744.084 kb on + strand, within EFB2_00734 at 744.085 kb on - strand, within EFB2_00734 at 744.183 kb on + strand at 744.184 kb on - strand at 744.184 kb on - strand at 744.184 kb on - strand at 744.184 kb on - strand at 744.184 kb on - strand at 744.184 kb on - strand at 744.184 kb on - strand at 744.203 kb on + strand at 744.203 kb on + strand at 744.203 kb on + strand at 744.203 kb on + strand at 744.203 kb on + strand at 744.203 kb on + strand at 744.203 kb on + strand at 744.203 kb on + strand at 744.203 kb on + strand at 744.203 kb on + strand at 744.203 kb on + strand at 744.203 kb on + strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.204 kb on - strand at 744.208 kb on + strand at 744.228 kb on + strand at 744.229 kb on - strand at 744.275 kb on + strand at 744.275 kb on + strand at 744.276 kb on - strand at 744.276 kb on - strand at 744.276 kb on - strand at 744.276 kb on - strand at 744.297 kb on + strand at 744.327 kb on + strand at 744.327 kb on + strand at 744.327 kb on + strand at 744.328 kb on - strand at 744.335 kb on + strand at 744.335 kb on + strand at 744.459 kb on + strand at 744.459 kb on + strand at 744.492 kb on + strand at 744.492 kb on + strand at 744.493 kb on - strand at 744.493 kb on - strand at 744.494 kb on + strand at 744.494 kb on + strand at 744.494 kb on + strand at 744.495 kb on - strand at 744.495 kb on - strand at 744.514 kb on - strand at 744.558 kb on + strand, within EFB2_00735 at 744.558 kb on + strand, within EFB2_00735 at 744.559 kb on - strand, within EFB2_00735 at 744.559 kb on - strand, within EFB2_00735 at 744.614 kb on + strand, within EFB2_00735 at 744.614 kb on + strand, within EFB2_00735 at 744.615 kb on - strand, within EFB2_00735 at 744.615 kb on - strand, within EFB2_00735 at 744.615 kb on - strand, within EFB2_00735 at 744.615 kb on - strand, within EFB2_00735 at 744.615 kb on - strand, within EFB2_00735 at 744.615 kb on - strand, within EFB2_00735 at 744.615 kb on - strand, within EFB2_00735 at 744.615 kb on - strand, within EFB2_00735 at 744.615 kb on - strand, within EFB2_00735 at 744.615 kb on - strand, within EFB2_00735 at 744.615 kb on - strand, within EFB2_00735 at 744.640 kb on - strand, within EFB2_00735 at 744.640 kb on - strand, within EFB2_00735 at 744.651 kb on + strand, within EFB2_00735 at 744.651 kb on + strand, within EFB2_00735 at 744.651 kb on + strand, within EFB2_00735 at 744.651 kb on + strand, within EFB2_00735 at 744.651 kb on + strand, within EFB2_00735 at 744.652 kb on - strand, within EFB2_00735 at 744.652 kb on - strand, within EFB2_00735 at 744.652 kb on - strand, within EFB2_00735 at 744.652 kb on - strand, within EFB2_00735 at 744.652 kb on - strand, within EFB2_00735 at 744.652 kb on - strand, within EFB2_00735 at 744.663 kb on + strand, within EFB2_00735 at 744.663 kb on + strand, within EFB2_00735 at 744.683 kb on + strand, within EFB2_00735 at 744.707 kb on + strand, within EFB2_00735 at 744.708 kb on - strand, within EFB2_00735 at 744.708 kb on - strand, within EFB2_00735 at 744.710 kb on + strand, within EFB2_00735 at 744.710 kb on + strand, within EFB2_00735 at 744.710 kb on + strand, within EFB2_00735 at 744.710 kb on + strand, within EFB2_00735 at 744.710 kb on + strand, within EFB2_00735 at 744.710 kb on + strand, within EFB2_00735 at 744.710 kb on + strand, within EFB2_00735 at 744.710 kb on + strand, within EFB2_00735 at 744.710 kb on + strand, within EFB2_00735 at 744.711 kb on - strand, within EFB2_00735 at 744.711 kb on - strand, within EFB2_00735 at 744.711 kb on - strand, within EFB2_00735 at 744.711 kb on - strand, within EFB2_00735 at 744.711 kb on - strand, within EFB2_00735 at 744.711 kb on - strand, within EFB2_00735 at 744.711 kb on - strand, within EFB2_00735 at 744.711 kb on - strand, within EFB2_00735 at 744.711 kb on - strand, within EFB2_00735 at 744.711 kb on - strand, within EFB2_00735 at 744.711 kb on - strand, within EFB2_00735
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) remove 741,294 + EFB2_00732 0.21 -1.7 741,294 + EFB2_00732 0.21 +0.5 741,294 + EFB2_00732 0.21 +0.8 741,294 + EFB2_00732 0.21 +1.6 741,294 + EFB2_00732 0.21 -0.6 741,294 + EFB2_00732 0.21 +0.5 741,294 + EFB2_00732 0.21 +0.6 741,294 + EFB2_00732 0.21 +2.2 741,294 + EFB2_00732 0.21 +0.7 741,294 + EFB2_00732 0.21 -0.7 741,294 + EFB2_00732 0.21 -0.7 741,294 + EFB2_00732 0.21 -2.3 741,294 + EFB2_00732 0.21 -3.0 741,294 + EFB2_00732 0.21 -0.5 741,294 + EFB2_00732 0.21 +0.2 741,294 + EFB2_00732 0.21 +0.5 741,294 + EFB2_00732 0.21 -2.9 741,294 + EFB2_00732 0.21 -2.5 741,294 + EFB2_00732 0.21 +0.4 741,294 + EFB2_00732 0.21 -2.0 741,294 + EFB2_00732 0.21 -1.9 741,294 + EFB2_00732 0.21 -1.4 741,294 + EFB2_00732 0.21 -2.6 741,294 + EFB2_00732 0.21 +0.4 741,294 + EFB2_00732 0.21 -0.4 741,294 + EFB2_00732 0.21 +1.0 741,294 + EFB2_00732 0.21 -0.6 741,294 + EFB2_00732 0.21 -0.8 741,294 + EFB2_00732 0.21 -0.0 741,294 + EFB2_00732 0.21 +0.5 741,294 + EFB2_00732 0.21 -4.0 741,294 + EFB2_00732 0.21 +0.6 741,294 + EFB2_00732 0.21 -0.8 741,295 - EFB2_00732 0.21 -1.3 741,295 - EFB2_00732 0.21 +2.3 741,295 - EFB2_00732 0.21 +0.9 741,295 - EFB2_00732 0.21 +0.7 741,295 - EFB2_00732 0.21 +0.6 741,295 - EFB2_00732 0.21 +0.7 741,295 - EFB2_00732 0.21 -0.8 741,295 - EFB2_00732 0.21 +1.0 741,295 - EFB2_00732 0.21 -0.5 741,295 - EFB2_00732 0.21 +1.5 741,295 - EFB2_00732 0.21 +1.6 741,295 - EFB2_00732 0.21 -1.4 741,295 - EFB2_00732 0.21 +1.7 741,295 - EFB2_00732 0.21 -0.9 741,295 - EFB2_00732 0.21 +0.4 741,295 - EFB2_00732 0.21 +1.3 741,295 - EFB2_00732 0.21 -1.4 741,295 - EFB2_00732 0.21 +0.6 741,295 - EFB2_00732 0.21 +0.0 741,295 - EFB2_00732 0.21 +1.3 741,295 - EFB2_00732 0.21 +3.7 741,295 - EFB2_00732 0.21 -2.9 741,295 - EFB2_00732 0.21 -2.6 741,295 - EFB2_00732 0.21 +1.2 741,295 - EFB2_00732 0.21 -1.3 741,295 - EFB2_00732 0.21 -1.3 741,295 - EFB2_00732 0.21 +1.1 741,295 - EFB2_00732 0.21 -0.8 741,295 - EFB2_00732 0.21 +0.9 741,295 - EFB2_00732 0.21 +0.0 741,295 - EFB2_00732 0.21 -0.8 741,359 - EFB2_00732 0.27 -0.6 741,386 - EFB2_00732 0.29 +1.1 741,391 + EFB2_00732 0.30 -0.4 741,392 - EFB2_00732 0.30 +1.2 741,408 + EFB2_00732 0.31 -0.3 741,408 + EFB2_00732 0.31 +0.1 741,408 + EFB2_00732 0.31 +0.3 741,408 + EFB2_00732 0.31 -1.7 741,408 + EFB2_00732 0.31 +0.2 741,408 + EFB2_00732 0.31 +1.1 741,409 - EFB2_00732 0.31 +1.2 741,409 - EFB2_00732 0.31 +0.2 741,409 - EFB2_00732 0.31 +0.5 741,409 - EFB2_00732 0.31 -0.4 741,409 - EFB2_00732 0.31 +0.2 741,457 + EFB2_00732 0.36 -2.7 741,457 + EFB2_00732 0.36 -1.0 741,457 + EFB2_00732 0.36 -0.9 741,457 + EFB2_00732 0.36 +0.4 741,457 + EFB2_00732 0.36 -0.9 741,457 + EFB2_00732 0.36 -0.7 741,457 + EFB2_00732 0.36 +0.3 741,457 + EFB2_00732 0.36 -0.4 741,457 + EFB2_00732 0.36 +0.3 741,458 - EFB2_00732 0.36 -0.3 741,458 - EFB2_00732 0.36 +0.9 741,474 + EFB2_00732 0.37 -0.3 741,474 + EFB2_00732 0.37 +1.6 741,475 - EFB2_00732 0.37 +0.7 741,475 - EFB2_00732 0.37 +0.2 741,483 + EFB2_00732 0.38 +0.3 741,483 + EFB2_00732 0.38 -1.1 741,483 + EFB2_00732 0.38 -0.4 741,483 + EFB2_00732 0.38 -0.8 741,483 + EFB2_00732 0.38 -0.2 741,484 - EFB2_00732 0.38 -0.3 741,484 - 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EFB2_00732 0.51 +0.8 741,640 + EFB2_00732 0.53 +0.2 741,640 + EFB2_00732 0.53 +1.6 741,640 + EFB2_00732 0.53 +1.2 741,640 + EFB2_00732 0.53 +0.2 741,640 + EFB2_00732 0.53 -1.6 741,640 + EFB2_00732 0.53 +0.1 741,640 + EFB2_00732 0.53 +1.6 741,641 - EFB2_00732 0.53 -1.0 741,641 - EFB2_00732 0.53 -0.9 741,641 - EFB2_00732 0.53 -1.9 741,641 - EFB2_00732 0.53 +1.5 741,641 - EFB2_00732 0.53 -0.3 741,666 + EFB2_00732 0.55 +1.7 741,666 + EFB2_00732 0.55 -3.6 741,667 - EFB2_00732 0.55 -2.5 741,760 + EFB2_00732 0.64 -0.6 741,761 - EFB2_00732 0.64 +0.1 741,761 - EFB2_00732 0.64 +0.4 741,765 + EFB2_00732 0.65 -0.6 741,774 + EFB2_00732 0.65 +0.1 741,774 + EFB2_00732 0.65 +1.1 741,774 + EFB2_00732 0.65 -1.1 741,811 + EFB2_00732 0.69 -2.3 741,811 + EFB2_00732 0.69 -0.1 741,811 + EFB2_00732 0.69 -3.5 741,811 + EFB2_00732 0.69 -0.6 741,811 + EFB2_00732 0.69 -1.0 741,812 - EFB2_00732 0.69 +0.3 741,812 - EFB2_00732 0.69 +0.9 741,894 + EFB2_00732 0.77 +0.9 741,894 + EFB2_00732 0.77 -3.6 741,894 + EFB2_00732 0.77 +1.6 741,894 + EFB2_00732 0.77 -0.9 741,894 + EFB2_00732 0.77 -0.6 741,894 + EFB2_00732 0.77 +0.7 741,894 + EFB2_00732 0.77 -3.0 741,895 - 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EFB2_00735 0.16 -0.1 744,711 - EFB2_00735 0.16 +0.6 744,711 - EFB2_00735 0.16 -1.3 744,711 - EFB2_00735 0.16 +0.9 744,711 - EFB2_00735 0.16 +1.0 744,711 - EFB2_00735 0.16 +1.7 744,711 - EFB2_00735 0.16 -0.7 744,711 - EFB2_00735 0.16 +0.0 744,711 - EFB2_00735 0.16 -1.7 744,711 - EFB2_00735 0.16 +0.5 744,711 - EFB2_00735 0.16 +0.4
Or see this region's nucleotide sequence