Experiment: BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EFB2_00315 and EFB2_00316 are separated by 71 nucleotides EFB2_00316 and EFB2_00317 are separated by 202 nucleotides
EFB2_00315: EFB2_00315 - Glutathione reductase, at 327,073 to 328,425
_00315
EFB2_00316: EFB2_00316 - Ribosomal RNA large subunit methyltransferase J, at 328,497 to 329,339
_00316
EFB2_00317: EFB2_00317 - Oligopeptidase A, at 329,542 to 331,584
_00317
Position (kb) 328
329
330 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 327.531 kb on - strand, within EFB2_00315 at 327.534 kb on + strand, within EFB2_00315 at 327.534 kb on + strand, within EFB2_00315 at 327.557 kb on + strand, within EFB2_00315 at 327.561 kb on + strand, within EFB2_00315 at 327.562 kb on - strand, within EFB2_00315 at 327.573 kb on + strand, within EFB2_00315 at 327.574 kb on - strand, within EFB2_00315 at 327.575 kb on + strand, within EFB2_00315 at 327.575 kb on + strand, within EFB2_00315 at 327.594 kb on + strand, within EFB2_00315 at 327.594 kb on + strand, within EFB2_00315 at 327.594 kb on + strand, within EFB2_00315 at 327.705 kb on + strand, within EFB2_00315 at 327.705 kb on + strand, within EFB2_00315 at 327.706 kb on - strand, within EFB2_00315 at 327.706 kb on - strand, within EFB2_00315 at 327.831 kb on + strand, within EFB2_00315 at 327.831 kb on + strand, within EFB2_00315 at 327.896 kb on + strand, within EFB2_00315 at 327.897 kb on - strand, within EFB2_00315 at 327.897 kb on - strand, within EFB2_00315 at 327.917 kb on - strand, within EFB2_00315 at 327.964 kb on - strand, within EFB2_00315 at 327.964 kb on - strand, within EFB2_00315 at 327.964 kb on - strand, within EFB2_00315 at 327.968 kb on + strand, within EFB2_00315 at 327.968 kb on + strand, within EFB2_00315 at 328.023 kb on + strand, within EFB2_00315 at 328.023 kb on + strand, within EFB2_00315 at 328.023 kb on + strand, within EFB2_00315 at 328.023 kb on + strand, within EFB2_00315 at 328.023 kb on + strand, within EFB2_00315 at 328.023 kb on + strand, within EFB2_00315 at 328.023 kb on + strand, within EFB2_00315 at 328.024 kb on - strand, within EFB2_00315 at 328.024 kb on - strand, within EFB2_00315 at 328.024 kb on - strand, within EFB2_00315 at 328.024 kb on - strand, within EFB2_00315 at 328.096 kb on + strand, within EFB2_00315 at 328.096 kb on + strand, within EFB2_00315 at 328.096 kb on + strand, within EFB2_00315 at 328.096 kb on + strand, within EFB2_00315 at 328.096 kb on + strand, within EFB2_00315 at 328.097 kb on - strand, within EFB2_00315 at 328.097 kb on - strand, within EFB2_00315 at 328.097 kb on - strand, within EFB2_00315 at 328.107 kb on + strand, within EFB2_00315 at 328.107 kb on + strand, within EFB2_00315 at 328.108 kb on - strand, within EFB2_00315 at 328.108 kb on - strand, within EFB2_00315 at 328.130 kb on + strand, within EFB2_00315 at 328.130 kb on + strand, within EFB2_00315 at 328.130 kb on + strand, within EFB2_00315 at 328.131 kb on - strand, within EFB2_00315 at 328.131 kb on - strand, within EFB2_00315 at 328.137 kb on + strand, within EFB2_00315 at 328.137 kb on + strand, within EFB2_00315 at 328.137 kb on + strand, within EFB2_00315 at 328.137 kb on + strand, within EFB2_00315 at 328.137 kb on + strand, within EFB2_00315 at 328.137 kb on + strand, within EFB2_00315 at 328.137 kb on + strand, within EFB2_00315 at 328.137 kb on + strand, within EFB2_00315 at 328.137 kb on + strand, within EFB2_00315 at 328.138 kb on - strand, within EFB2_00315 at 328.138 kb on - strand, within EFB2_00315 at 328.138 kb on - strand, within EFB2_00315 at 328.138 kb on - strand, within EFB2_00315 at 328.138 kb on - strand, within EFB2_00315 at 328.138 kb on - strand, within EFB2_00315 at 328.138 kb on - strand, within EFB2_00315 at 328.138 kb on - strand, within EFB2_00315 at 328.143 kb on + strand, within EFB2_00315 at 328.143 kb on + strand, within EFB2_00315 at 328.144 kb on - strand, within EFB2_00315 at 328.144 kb on - strand, within EFB2_00315 at 328.144 kb on - strand, within EFB2_00315 at 328.152 kb on + strand, within EFB2_00315 at 328.154 kb on + strand, within EFB2_00315 at 328.154 kb on + strand, within EFB2_00315 at 328.155 kb on - strand, within EFB2_00315 at 328.155 kb on - strand, within EFB2_00315 at 328.155 kb on - strand, within EFB2_00315 at 328.155 kb on - strand, within EFB2_00315 at 328.194 kb on + strand, within EFB2_00315 at 328.194 kb on + strand, within EFB2_00315 at 328.195 kb on - strand, within EFB2_00315 at 328.195 kb on - strand, within EFB2_00315 at 328.200 kb on + strand, within EFB2_00315 at 328.201 kb on - strand, within EFB2_00315 at 328.201 kb on - strand, within EFB2_00315 at 328.207 kb on - strand, within EFB2_00315 at 328.217 kb on + strand, within EFB2_00315 at 328.218 kb on - strand, within EFB2_00315 at 328.218 kb on - strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.229 kb on + strand, within EFB2_00315 at 328.230 kb on - strand, within EFB2_00315 at 328.230 kb on - strand, within EFB2_00315 at 328.230 kb on - strand, within EFB2_00315 at 328.230 kb on - strand, within EFB2_00315 at 328.230 kb on - strand, within EFB2_00315 at 328.230 kb on - strand, within EFB2_00315 at 328.230 kb on - strand, within EFB2_00315 at 328.230 kb on - strand, within EFB2_00315 at 328.230 kb on - strand, within EFB2_00315 at 328.230 kb on - strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.233 kb on + strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.234 kb on - strand, within EFB2_00315 at 328.297 kb on + strand at 328.297 kb on + strand at 328.297 kb on + strand at 328.297 kb on + strand at 328.297 kb on + strand at 328.297 kb on + strand at 328.298 kb on - strand at 328.298 kb on - strand at 328.298 kb on - strand at 328.298 kb on - strand at 328.298 kb on - strand at 328.298 kb on - strand at 328.298 kb on - strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.349 kb on + strand at 328.350 kb on - strand at 328.350 kb on - strand at 328.350 kb on - strand at 328.350 kb on - strand at 328.350 kb on - strand at 328.350 kb on - strand at 328.350 kb on - strand at 328.350 kb on - strand at 328.350 kb on - strand at 328.353 kb on + strand at 328.353 kb on + strand at 328.353 kb on + strand at 328.353 kb on + strand at 328.354 kb on - strand at 328.354 kb on - strand at 328.354 kb on - strand at 328.354 kb on - strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.406 kb on + strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.407 kb on - strand at 328.412 kb on + strand at 328.412 kb on + strand at 328.413 kb on - strand at 328.413 kb on - strand at 328.413 kb on - strand at 328.413 kb on - strand at 328.413 kb on - strand at 328.413 kb on - strand at 328.413 kb on - strand at 328.419 kb on + strand at 328.419 kb on + strand at 328.419 kb on + strand at 328.419 kb on + strand at 328.420 kb on - strand at 328.420 kb on - strand at 328.420 kb on - strand at 328.420 kb on - strand at 328.420 kb on - strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.430 kb on + strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.431 kb on - strand at 328.440 kb on - strand at 328.449 kb on + strand at 328.460 kb on + strand at 328.461 kb on - strand at 328.461 kb on - strand at 328.461 kb on - strand at 328.461 kb on - strand at 328.461 kb on - strand at 328.461 kb on - strand at 328.461 kb on - strand at 328.461 kb on - strand at 328.472 kb on + strand at 328.472 kb on + strand at 328.472 kb on + strand at 328.472 kb on + strand at 328.472 kb on + strand at 328.472 kb on + strand at 328.472 kb on + strand at 328.472 kb on + strand at 328.472 kb on + strand at 328.472 kb on + strand at 328.472 kb on + strand at 328.472 kb on + strand at 328.473 kb on - strand at 328.473 kb on - strand at 328.473 kb on - strand at 328.473 kb on - strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.475 kb on + strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.476 kb on - strand at 328.498 kb on + strand at 328.498 kb on + strand at 328.499 kb on - strand at 328.499 kb on - strand at 328.518 kb on + strand at 328.518 kb on + strand at 328.518 kb on + strand at 328.518 kb on + strand at 328.519 kb on - strand at 328.519 kb on - strand at 328.519 kb on - strand at 328.577 kb on + strand at 328.577 kb on + strand at 328.577 kb on + strand at 328.577 kb on + strand at 328.578 kb on - strand at 328.578 kb on - strand at 328.610 kb on + strand, within EFB2_00316 at 328.727 kb on + strand, within EFB2_00316 at 328.727 kb on + strand, within EFB2_00316 at 328.727 kb on + strand, within EFB2_00316 at 328.728 kb on - strand, within EFB2_00316 at 328.728 kb on - strand, within EFB2_00316 at 328.728 kb on - strand, within EFB2_00316 at 328.765 kb on + strand, within EFB2_00316 at 328.765 kb on + strand, within EFB2_00316 at 328.765 kb on + strand, within EFB2_00316 at 328.765 kb on + strand, within EFB2_00316 at 328.765 kb on + strand, within EFB2_00316 at 328.765 kb on + strand, within EFB2_00316 at 328.765 kb on + strand, within EFB2_00316 at 328.765 kb on + strand, within EFB2_00316 at 328.765 kb on + strand, within EFB2_00316 at 328.766 kb on - strand, within EFB2_00316 at 328.766 kb on - strand, within EFB2_00316 at 328.766 kb on - strand, within EFB2_00316 at 328.766 kb on - strand, within EFB2_00316 at 328.766 kb on - strand, within EFB2_00316 at 328.766 kb on - strand, within EFB2_00316 at 328.766 kb on - strand, within EFB2_00316 at 328.766 kb on - strand, within EFB2_00316 at 328.766 kb on - strand, within EFB2_00316 at 328.789 kb on + strand, within EFB2_00316 at 328.789 kb on + strand, within EFB2_00316 at 328.790 kb on - strand, within EFB2_00316 at 328.800 kb on + strand, within EFB2_00316 at 328.841 kb on - strand, within EFB2_00316 at 328.841 kb on - strand, within EFB2_00316 at 328.861 kb on - strand, within EFB2_00316 at 328.861 kb on - strand, within EFB2_00316 at 328.861 kb on - strand, within EFB2_00316 at 328.861 kb on - strand, within EFB2_00316 at 328.896 kb on - strand, within EFB2_00316 at 329.019 kb on + strand, within EFB2_00316 at 329.019 kb on + strand, within EFB2_00316 at 329.019 kb on + strand, within EFB2_00316 at 329.019 kb on + strand, within EFB2_00316 at 329.019 kb on + strand, within EFB2_00316 at 329.020 kb on - strand, within EFB2_00316 at 329.020 kb on - strand, within EFB2_00316 at 329.020 kb on - strand, within EFB2_00316 at 329.020 kb on - strand, within EFB2_00316 at 329.020 kb on - strand, within EFB2_00316 at 329.020 kb on - strand, within EFB2_00316 at 329.050 kb on + strand, within EFB2_00316 at 329.050 kb on + strand, within EFB2_00316 at 329.053 kb on + strand, within EFB2_00316 at 329.054 kb on - strand, within EFB2_00316 at 329.054 kb on - strand, within EFB2_00316 at 329.054 kb on - strand, within EFB2_00316 at 329.054 kb on - strand, within EFB2_00316 at 329.085 kb on + strand, within EFB2_00316 at 329.085 kb on + strand, within EFB2_00316 at 329.086 kb on - strand, within EFB2_00316 at 329.086 kb on - strand, within EFB2_00316 at 329.086 kb on - strand, within EFB2_00316 at 329.086 kb on - strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.098 kb on + strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.099 kb on - strand, within EFB2_00316 at 329.138 kb on + strand, within EFB2_00316 at 329.139 kb on - strand, within EFB2_00316 at 329.139 kb on - strand, within EFB2_00316 at 329.139 kb on - strand, within EFB2_00316 at 329.139 kb on - strand, within EFB2_00316 at 329.158 kb on + strand, within EFB2_00316 at 329.158 kb on + strand, within EFB2_00316 at 329.158 kb on + strand, within EFB2_00316 at 329.159 kb on - strand, within EFB2_00316 at 329.169 kb on - strand, within EFB2_00316 at 329.190 kb on + strand, within EFB2_00316 at 329.197 kb on + strand, within EFB2_00316 at 329.240 kb on + strand, within EFB2_00316 at 329.240 kb on + strand, within EFB2_00316 at 329.240 kb on + strand, within EFB2_00316 at 329.240 kb on + strand, within EFB2_00316 at 329.241 kb on - strand, within EFB2_00316 at 329.241 kb on - strand, within EFB2_00316 at 329.241 kb on - strand, within EFB2_00316 at 329.241 kb on - strand, within EFB2_00316 at 329.282 kb on + strand at 329.282 kb on + strand at 329.282 kb on + strand at 329.283 kb on - strand at 329.288 kb on + strand at 329.289 kb on - strand at 329.357 kb on + strand at 329.357 kb on + strand at 329.357 kb on + strand at 329.358 kb on - strand at 329.358 kb on - strand at 329.361 kb on + strand at 329.396 kb on + strand at 329.396 kb on + strand at 329.397 kb on - strand at 329.407 kb on + strand at 329.407 kb on + strand at 329.407 kb on + strand at 329.407 kb on + strand at 329.407 kb on + strand at 329.407 kb on + strand at 329.407 kb on + strand at 329.407 kb on + strand at 329.407 kb on + strand at 329.407 kb on + strand at 329.408 kb on - strand at 329.408 kb on - strand at 329.408 kb on - strand at 329.409 kb on + strand at 329.409 kb on + strand at 329.409 kb on + strand at 329.410 kb on - strand at 329.462 kb on + strand at 329.462 kb on + strand at 329.462 kb on + strand at 329.462 kb on + strand at 329.463 kb on - strand at 329.463 kb on - strand at 329.468 kb on + strand at 329.468 kb on + strand at 329.468 kb on + strand at 329.468 kb on + strand at 329.468 kb on + strand at 329.468 kb on + strand at 329.469 kb on - strand at 329.469 kb on - strand at 329.469 kb on - strand at 329.469 kb on - strand at 329.469 kb on - strand at 329.469 kb on - strand at 329.469 kb on - strand at 329.469 kb on - strand at 329.469 kb on - strand at 329.469 kb on - strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.479 kb on + strand at 329.480 kb on - strand at 329.480 kb on - strand at 329.480 kb on - strand at 329.480 kb on - strand at 329.480 kb on - strand at 329.480 kb on - strand at 329.488 kb on + strand at 329.488 kb on + strand at 329.488 kb on + strand at 329.488 kb on + strand at 329.488 kb on + strand at 329.488 kb on + strand at 329.488 kb on + strand at 329.488 kb on + strand at 329.488 kb on + strand at 329.488 kb on + strand at 329.488 kb on + strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.489 kb on - strand at 329.492 kb on + strand at 329.492 kb on + strand at 329.492 kb on + strand at 329.492 kb on + strand at 329.492 kb on + strand at 329.492 kb on + strand at 329.492 kb on + strand at 329.492 kb on + strand at 329.492 kb on + strand at 329.492 kb on + strand at 329.492 kb on + strand at 329.493 kb on - strand at 329.493 kb on - strand at 329.493 kb on - strand at 329.493 kb on - strand at 329.493 kb on - strand at 329.493 kb on - strand at 329.493 kb on - strand at 329.493 kb on - strand at 329.493 kb on - strand at 329.493 kb on - strand at 329.493 kb on - strand at 329.541 kb on - strand at 329.541 kb on - strand at 329.622 kb on + strand at 329.623 kb on - strand at 329.660 kb on + strand at 329.660 kb on + strand at 329.661 kb on - strand at 329.661 kb on - strand at 329.664 kb on - strand at 329.664 kb on - strand at 329.664 kb on - strand at 329.680 kb on + strand at 329.680 kb on + strand at 329.680 kb on + strand at 329.680 kb on + strand at 329.680 kb on + strand at 329.680 kb on + strand at 329.680 kb on + strand at 329.680 kb on + strand at 329.680 kb on + strand at 329.680 kb on + strand at 329.680 kb on + strand at 329.681 kb on - strand at 329.681 kb on - strand at 329.681 kb on - strand at 329.681 kb on - strand at 329.681 kb on - strand at 329.681 kb on - strand at 329.681 kb on - strand at 329.681 kb on - strand at 329.681 kb on - strand at 329.681 kb on - strand at 329.681 kb on - strand at 329.736 kb on + strand at 329.736 kb on + strand at 329.736 kb on + strand at 329.736 kb on + strand at 329.736 kb on + strand at 329.736 kb on + strand at 329.736 kb on + strand at 329.737 kb on - strand at 329.737 kb on - strand at 329.737 kb on - strand at 329.737 kb on - strand at 329.737 kb on - strand at 329.776 kb on - strand, within EFB2_00317 at 329.827 kb on + strand, within EFB2_00317 at 329.827 kb on + strand, within EFB2_00317 at 329.827 kb on + strand, within EFB2_00317 at 329.827 kb on + strand, within EFB2_00317 at 329.827 kb on + strand, within EFB2_00317 at 329.827 kb on + strand, within EFB2_00317 at 329.828 kb on - strand, within EFB2_00317 at 329.828 kb on - strand, within EFB2_00317 at 329.828 kb on - strand, within EFB2_00317 at 329.828 kb on - strand, within EFB2_00317 at 329.828 kb on - strand, within EFB2_00317 at 329.828 kb on - strand, within EFB2_00317 at 329.828 kb on - strand, within EFB2_00317 at 329.828 kb on - strand, within EFB2_00317 at 329.840 kb on + strand, within EFB2_00317 at 329.841 kb on - strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.860 kb on + strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.861 kb on - strand, within EFB2_00317 at 329.862 kb on + strand, within EFB2_00317 at 329.862 kb on + strand, within EFB2_00317 at 329.862 kb on + strand, within EFB2_00317 at 329.862 kb on + strand, within EFB2_00317 at 329.862 kb on + strand, within EFB2_00317 at 329.862 kb on + strand, within EFB2_00317 at 329.862 kb on + strand, within EFB2_00317 at 329.862 kb on + strand, within EFB2_00317 at 329.862 kb on + strand, within EFB2_00317 at 329.862 kb on + strand, within EFB2_00317 at 329.862 kb on + strand, within EFB2_00317 at 329.863 kb on - strand, within EFB2_00317 at 329.863 kb on - strand, within EFB2_00317 at 329.863 kb on - strand, within EFB2_00317 at 329.863 kb on - strand, within EFB2_00317 at 329.896 kb on + strand, within EFB2_00317 at 329.897 kb on - strand, within EFB2_00317 at 329.897 kb on - strand, within EFB2_00317 at 329.935 kb on - strand, within EFB2_00317 at 329.996 kb on - strand, within EFB2_00317 at 330.010 kb on - strand, within EFB2_00317 at 330.037 kb on + strand, within EFB2_00317 at 330.037 kb on + strand, within EFB2_00317 at 330.038 kb on - strand, within EFB2_00317 at 330.038 kb on - strand, within EFB2_00317 at 330.038 kb on - strand, within EFB2_00317 at 330.038 kb on - strand, within EFB2_00317 at 330.169 kb on + strand, within EFB2_00317 at 330.169 kb on + strand, within EFB2_00317 at 330.169 kb on + strand, within EFB2_00317 at 330.169 kb on + strand, within EFB2_00317 at 330.169 kb on + strand, within EFB2_00317 at 330.169 kb on + strand, within EFB2_00317 at 330.169 kb on + strand, within EFB2_00317 at 330.170 kb on - strand, within EFB2_00317 at 330.196 kb on + strand, within EFB2_00317 at 330.196 kb on + strand, within EFB2_00317 at 330.196 kb on + strand, within EFB2_00317 at 330.196 kb on + strand, within EFB2_00317 at 330.196 kb on + strand, within EFB2_00317 at 330.197 kb on - strand, within EFB2_00317 at 330.197 kb on - strand, within EFB2_00317 at 330.197 kb on - strand, within EFB2_00317 at 330.197 kb on - strand, within EFB2_00317 at 330.197 kb on - strand, within EFB2_00317 at 330.197 kb on - strand, within EFB2_00317 at 330.214 kb on + strand, within EFB2_00317 at 330.214 kb on + strand, within EFB2_00317 at 330.214 kb on + strand, within EFB2_00317 at 330.214 kb on + strand, within EFB2_00317 at 330.214 kb on + strand, within EFB2_00317 at 330.214 kb on + strand, within EFB2_00317 at 330.214 kb on + strand, within EFB2_00317 at 330.215 kb on - strand, within EFB2_00317 at 330.215 kb on - strand, within EFB2_00317 at 330.215 kb on - strand, within EFB2_00317 at 330.215 kb on - strand, within EFB2_00317 at 330.215 kb on - strand, within EFB2_00317 at 330.215 kb on - strand, within EFB2_00317 at 330.215 kb on - strand, within EFB2_00317 at 330.215 kb on - strand, within EFB2_00317 at 330.215 kb on - strand, within EFB2_00317 at 330.215 kb on - strand, within EFB2_00317 at 330.215 kb on - strand, within EFB2_00317 at 330.247 kb on + strand, within EFB2_00317 at 330.247 kb on + strand, within EFB2_00317 at 330.247 kb on + strand, within EFB2_00317 at 330.247 kb on + strand, within EFB2_00317 at 330.247 kb on + strand, within EFB2_00317 at 330.247 kb on + strand, within EFB2_00317 at 330.247 kb on + strand, within EFB2_00317 at 330.247 kb on + strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.248 kb on - strand, within EFB2_00317 at 330.256 kb on + strand, within EFB2_00317 at 330.256 kb on + strand, within EFB2_00317 at 330.256 kb on + strand, within EFB2_00317 at 330.257 kb on - strand, within EFB2_00317 at 330.257 kb on - strand, within EFB2_00317 at 330.257 kb on - strand, within EFB2_00317 at 330.257 kb on - strand, within EFB2_00317 at 330.257 kb on - strand, within EFB2_00317 at 330.258 kb on + strand, within EFB2_00317 at 330.258 kb on + strand, within EFB2_00317 at 330.258 kb on + strand, within EFB2_00317 at 330.258 kb on + strand, within EFB2_00317 at 330.258 kb on + strand, within EFB2_00317 at 330.258 kb on + strand, within EFB2_00317 at 330.258 kb on + strand, within EFB2_00317 at 330.258 kb on + strand, within EFB2_00317 at 330.258 kb on + strand, within EFB2_00317 at 330.259 kb on - strand, within EFB2_00317 at 330.259 kb on - strand, within EFB2_00317 at 330.259 kb on - strand, within EFB2_00317 at 330.259 kb on - strand, within EFB2_00317 at 330.259 kb on - strand, within EFB2_00317 at 330.259 kb on - strand, within EFB2_00317 at 330.259 kb on - strand, within EFB2_00317 at 330.259 kb on - strand, within EFB2_00317 at 330.259 kb on - strand, within EFB2_00317 at 330.294 kb on + strand, within EFB2_00317 at 330.294 kb on + strand, within EFB2_00317 at 330.295 kb on - strand, within EFB2_00317
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) remove 327,531 - EFB2_00315 0.34 -1.4 327,534 + EFB2_00315 0.34 -0.6 327,534 + EFB2_00315 0.34 -1.7 327,557 + EFB2_00315 0.36 +2.1 327,561 + EFB2_00315 0.36 +0.4 327,562 - EFB2_00315 0.36 -1.9 327,573 + EFB2_00315 0.37 +1.5 327,574 - EFB2_00315 0.37 -1.4 327,575 + EFB2_00315 0.37 -1.0 327,575 + EFB2_00315 0.37 -0.5 327,594 + EFB2_00315 0.39 -2.5 327,594 + EFB2_00315 0.39 -0.2 327,594 + EFB2_00315 0.39 -1.4 327,705 + EFB2_00315 0.47 -0.1 327,705 + EFB2_00315 0.47 -0.6 327,706 - EFB2_00315 0.47 +0.1 327,706 - EFB2_00315 0.47 -0.9 327,831 + EFB2_00315 0.56 +0.6 327,831 + EFB2_00315 0.56 -0.1 327,896 + EFB2_00315 0.61 -0.8 327,897 - EFB2_00315 0.61 -2.7 327,897 - EFB2_00315 0.61 -0.1 327,917 - EFB2_00315 0.62 -0.3 327,964 - EFB2_00315 0.66 -0.9 327,964 - EFB2_00315 0.66 -2.1 327,964 - EFB2_00315 0.66 +0.8 327,968 + EFB2_00315 0.66 -0.6 327,968 + EFB2_00315 0.66 -0.3 328,023 + EFB2_00315 0.70 +0.3 328,023 + EFB2_00315 0.70 +1.2 328,023 + EFB2_00315 0.70 -0.5 328,023 + EFB2_00315 0.70 +0.5 328,023 + EFB2_00315 0.70 -1.0 328,023 + EFB2_00315 0.70 -0.0 328,023 + EFB2_00315 0.70 +0.4 328,024 - EFB2_00315 0.70 +0.9 328,024 - EFB2_00315 0.70 +0.0 328,024 - EFB2_00315 0.70 -1.1 328,024 - EFB2_00315 0.70 -1.1 328,096 + EFB2_00315 0.76 +3.3 328,096 + EFB2_00315 0.76 -3.3 328,096 + EFB2_00315 0.76 -1.2 328,096 + EFB2_00315 0.76 +1.6 328,096 + EFB2_00315 0.76 +0.3 328,097 - EFB2_00315 0.76 +0.4 328,097 - EFB2_00315 0.76 -0.9 328,097 - EFB2_00315 0.76 -0.2 328,107 + EFB2_00315 0.76 +0.3 328,107 + EFB2_00315 0.76 +0.9 328,108 - EFB2_00315 0.76 -0.7 328,108 - EFB2_00315 0.76 -0.2 328,130 + EFB2_00315 0.78 -0.8 328,130 + EFB2_00315 0.78 -0.1 328,130 + EFB2_00315 0.78 -0.0 328,131 - EFB2_00315 0.78 +3.0 328,131 - EFB2_00315 0.78 -0.3 328,137 + EFB2_00315 0.79 -0.7 328,137 + EFB2_00315 0.79 -0.7 328,137 + EFB2_00315 0.79 +0.3 328,137 + EFB2_00315 0.79 +0.5 328,137 + EFB2_00315 0.79 +0.9 328,137 + EFB2_00315 0.79 -1.0 328,137 + EFB2_00315 0.79 -2.1 328,137 + EFB2_00315 0.79 -0.0 328,137 + EFB2_00315 0.79 -1.8 328,138 - EFB2_00315 0.79 +1.0 328,138 - EFB2_00315 0.79 -1.6 328,138 - EFB2_00315 0.79 -0.9 328,138 - EFB2_00315 0.79 +0.0 328,138 - EFB2_00315 0.79 -1.6 328,138 - EFB2_00315 0.79 -1.8 328,138 - EFB2_00315 0.79 -0.8 328,138 - EFB2_00315 0.79 +0.5 328,143 + EFB2_00315 0.79 -2.6 328,143 + EFB2_00315 0.79 +2.2 328,144 - EFB2_00315 0.79 +1.4 328,144 - EFB2_00315 0.79 -1.5 328,144 - EFB2_00315 0.79 -0.5 328,152 + EFB2_00315 0.80 -2.2 328,154 + EFB2_00315 0.80 -0.2 328,154 + EFB2_00315 0.80 -0.5 328,155 - EFB2_00315 0.80 -2.4 328,155 - EFB2_00315 0.80 -2.9 328,155 - EFB2_00315 0.80 +0.1 328,155 - EFB2_00315 0.80 +0.1 328,194 + EFB2_00315 0.83 +0.0 328,194 + EFB2_00315 0.83 +3.1 328,195 - EFB2_00315 0.83 -1.6 328,195 - EFB2_00315 0.83 +1.5 328,200 + EFB2_00315 0.83 +1.4 328,201 - EFB2_00315 0.83 +0.3 328,201 - EFB2_00315 0.83 +2.1 328,207 - EFB2_00315 0.84 +0.7 328,217 + EFB2_00315 0.85 +0.3 328,218 - EFB2_00315 0.85 -1.4 328,218 - EFB2_00315 0.85 +1.0 328,229 + EFB2_00315 0.85 +1.2 328,229 + EFB2_00315 0.85 -0.1 328,229 + EFB2_00315 0.85 +0.5 328,229 + EFB2_00315 0.85 -1.2 328,229 + EFB2_00315 0.85 -0.5 328,229 + EFB2_00315 0.85 -1.2 328,229 + EFB2_00315 0.85 -0.2 328,229 + EFB2_00315 0.85 +0.3 328,229 + EFB2_00315 0.85 -2.6 328,229 + EFB2_00315 0.85 +0.3 328,229 + EFB2_00315 0.85 -0.3 328,229 + EFB2_00315 0.85 -2.8 328,229 + EFB2_00315 0.85 +2.0 328,229 + EFB2_00315 0.85 -3.1 328,229 + EFB2_00315 0.85 +0.9 328,230 - EFB2_00315 0.86 -0.6 328,230 - EFB2_00315 0.86 -1.2 328,230 - EFB2_00315 0.86 +1.2 328,230 - EFB2_00315 0.86 -1.2 328,230 - EFB2_00315 0.86 +0.5 328,230 - EFB2_00315 0.86 -3.9 328,230 - EFB2_00315 0.86 +0.0 328,230 - EFB2_00315 0.86 -0.5 328,230 - EFB2_00315 0.86 +2.0 328,230 - EFB2_00315 0.86 -0.5 328,233 + EFB2_00315 0.86 -2.6 328,233 + EFB2_00315 0.86 -0.8 328,233 + EFB2_00315 0.86 -3.0 328,233 + EFB2_00315 0.86 -0.1 328,233 + EFB2_00315 0.86 +1.0 328,233 + EFB2_00315 0.86 -0.4 328,233 + EFB2_00315 0.86 -1.7 328,233 + EFB2_00315 0.86 +5.2 328,233 + EFB2_00315 0.86 -3.2 328,233 + EFB2_00315 0.86 -2.5 328,233 + EFB2_00315 0.86 +0.7 328,233 + EFB2_00315 0.86 -3.8 328,233 + EFB2_00315 0.86 -0.2 328,234 - EFB2_00315 0.86 +0.5 328,234 - EFB2_00315 0.86 -0.1 328,234 - EFB2_00315 0.86 -0.1 328,234 - EFB2_00315 0.86 +0.6 328,234 - EFB2_00315 0.86 -2.0 328,234 - EFB2_00315 0.86 -1.3 328,234 - EFB2_00315 0.86 -1.5 328,234 - EFB2_00315 0.86 -0.4 328,234 - EFB2_00315 0.86 -0.7 328,234 - EFB2_00315 0.86 -0.3 328,234 - EFB2_00315 0.86 +2.9 328,234 - EFB2_00315 0.86 -3.2 328,234 - EFB2_00315 0.86 -2.9 328,297 + -0.1 328,297 + -1.9 328,297 + -0.0 328,297 + -2.2 328,297 + -2.9 328,297 + +1.5 328,298 - -0.5 328,298 - +0.4 328,298 - -0.3 328,298 - +1.5 328,298 - +0.0 328,298 - -0.5 328,298 - +0.3 328,349 + -3.5 328,349 + -1.2 328,349 + -0.8 328,349 + +0.3 328,349 + -1.1 328,349 + +1.2 328,349 + +0.4 328,349 + -0.5 328,349 + +2.1 328,349 + +0.6 328,349 + +0.7 328,349 + -1.1 328,349 + +0.6 328,349 + -1.9 328,349 + -2.7 328,350 - -1.5 328,350 - -0.7 328,350 - +1.9 328,350 - +0.4 328,350 - -0.8 328,350 - -0.1 328,350 - -1.0 328,350 - +0.4 328,350 - -1.2 328,353 + +1.6 328,353 + +1.3 328,353 + -0.6 328,353 + -1.5 328,354 - -3.9 328,354 - +0.1 328,354 - -2.6 328,354 - -2.5 328,406 + -3.0 328,406 + -2.2 328,406 + -1.0 328,406 + -2.4 328,406 + -0.1 328,406 + +0.4 328,406 + +0.2 328,406 + -1.3 328,406 + +0.0 328,406 + -0.3 328,406 + -3.5 328,406 + +0.4 328,406 + -1.6 328,406 + -2.3 328,406 + +1.0 328,406 + -0.9 328,406 + -1.1 328,406 + +0.1 328,406 + -0.7 328,406 + +0.7 328,406 + -2.2 328,406 + +0.3 328,406 + -1.5 328,406 + -0.2 328,406 + -3.6 328,406 + -1.3 328,407 - +1.1 328,407 - +0.6 328,407 - +0.1 328,407 - -3.7 328,407 - +0.4 328,407 - -3.8 328,407 - -0.4 328,407 - -0.4 328,407 - -0.7 328,407 - -1.5 328,407 - -0.5 328,407 - -0.1 328,407 - +0.8 328,407 - -1.2 328,407 - +0.3 328,407 - +2.0 328,407 - -1.3 328,407 - +0.3 328,407 - -2.0 328,407 - -1.2 328,407 - +0.1 328,407 - +0.8 328,407 - +1.4 328,407 - +1.0 328,407 - -0.4 328,407 - +0.7 328,407 - +1.5 328,407 - -0.4 328,407 - -2.2 328,407 - +0.9 328,407 - -0.3 328,412 + -1.5 328,412 + +0.6 328,413 - +0.3 328,413 - -2.0 328,413 - -0.2 328,413 - -0.3 328,413 - +0.2 328,413 - +0.6 328,413 - -1.5 328,419 + -0.2 328,419 + +0.6 328,419 + +1.2 328,419 + -3.0 328,420 - +0.7 328,420 - +0.8 328,420 - -0.8 328,420 - -1.9 328,420 - -0.9 328,430 + -0.1 328,430 + -1.7 328,430 + +0.2 328,430 + -4.1 328,430 + +1.1 328,430 + +1.2 328,430 + +1.5 328,430 + -0.8 328,430 + -2.2 328,430 + +0.3 328,430 + -1.0 328,430 + +0.1 328,430 + +1.8 328,430 + -0.3 328,430 + -2.7 328,430 + +1.0 328,430 + -0.3 328,430 + +0.1 328,430 + +1.0 328,430 + -2.5 328,430 + -3.1 328,430 + -0.0 328,430 + -0.5 328,430 + -0.4 328,430 + -0.6 328,430 + +0.2 328,430 + +1.0 328,430 + -0.2 328,430 + -3.2 328,430 + -0.8 328,430 + +1.0 328,430 + -0.9 328,431 - 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EFB2_00317 0.37 -2.9
Or see this region's nucleotide sequence