Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05479

Experiment: R2A 1 x (C) complex media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A 1 x (C) complex media
977,567	-		BACOVA_05478	0.85	-1.0
977,567	-		BACOVA_05478	0.85	-0.8
977,582	-		BACOVA_05478	0.85	-0.1
977,583	+		BACOVA_05478	0.85	-0.5
977,583	+		BACOVA_05478	0.85	+0.2
977,584	-		BACOVA_05478	0.85	-1.2
977,622	+		BACOVA_05478	0.87	-0.1
977,626	-		BACOVA_05478	0.87	+0.5
977,657	+		BACOVA_05478	0.89	+0.4
977,657	+		BACOVA_05478	0.89	+0.6
977,657	+		BACOVA_05478	0.89	-0.1
977,657	+		BACOVA_05478	0.89	+0.3
977,666	-		BACOVA_05478	0.89	+0.5
977,684	+		BACOVA_05478	0.90	-0.2
977,684	+		BACOVA_05478	0.90	+0.5
977,687	+				-0.3
977,688	-				-0.2
977,691	-				-0.5
977,748	+				+0.8
977,781	+				-2.4
977,781	+				-0.1
977,790	+				-0.8
977,791	-				-0.0
977,802	+				-0.7
977,802	+				+0.3
977,803	-				-0.3
977,806	+				-0.1
977,806	+				+0.9
977,807	-				-1.2
977,807	-				-1.1
977,812	+				-0.9
977,813	-				+0.4
977,813	-				-1.4
977,831	-				-0.7
977,867	-				+0.9
977,881	-				-1.0
977,881	-				-0.3
977,886	+				-1.4
977,886	-				+0.2
977,904	+				-0.3
977,910	-				-0.7
977,956	-				-2.1
977,968	+				+0.2
977,968	+				+1.3
978,024	-				+1.5
978,040	-				-1.3
978,048	-				-1.7
978,089	+				+0.1
978,123	+				+0.3
978,136	-				-1.3
978,136	-				-0.7
978,136	-				-0.6
978,177	+				+0.5
978,177	+				+0.1
978,178	-				-1.0
978,184	+				-1.0
978,194	+				+1.1
978,201	+				-1.0
978,201	+				-2.0
978,201	+				-0.4
978,214	+				+0.4
978,223	+				+0.2
978,252	-				-0.1
978,257	+				-0.2
978,281	-				-0.1
978,291	-				-0.5
978,291	-				+0.0
978,339	-				+2.0
978,341	+				+0.9
978,369	+				-0.3
978,369	+				-0.5
978,378	-				-1.0
978,391	+				+1.0
978,392	-				-0.4
978,445	-				+0.4
978,462	+				+1.1
978,462	+				-0.1
978,463	-				+0.3
978,466	+				-0.4
978,468	+				+0.2
978,543	+				+0.4
978,543	+				+0.3
978,543	+				-0.4
978,543	+				-0.0
978,551	+				-0.2
978,552	-				+0.0
978,575	+				-0.6
978,575	+				+0.6
978,575	+				-0.4
978,576	-				+0.4
978,576	-				-1.0
978,578	+				+0.7
978,579	-				-0.6
978,579	-				+0.4
978,579	-				-0.9
978,580	-				-0.1
978,581	-				-0.1
978,620	+				+1.4
978,620	+				+0.8
978,629	-				-0.5
978,638	+				+0.2
978,642	-				-0.7
978,642	-				-0.0
978,642	-				-0.8
978,674	+				-0.9
978,675	-				+0.0
978,675	-				-0.4
978,675	-				-0.5
978,675	-				+1.2
978,676	+				+0.9
978,779	+				+0.9
978,791	+				-1.9
978,792	-				+0.3
978,818	+				-0.8
978,900	-				+0.3
978,934	+				+0.2
978,934	+				-0.4
978,947	+				-0.8
978,948	-				-0.2
978,948	-				-1.6
978,968	+		BACOVA_05479	0.10	-0.2
978,969	-		BACOVA_05479	0.10	+0.6
978,983	+		BACOVA_05479	0.10	-0.4
978,984	-		BACOVA_05479	0.10	-0.4
979,018	+		BACOVA_05479	0.11	+1.2
979,018	+		BACOVA_05479	0.11	-1.4
979,104	-		BACOVA_05479	0.13	+1.3
979,104	-		BACOVA_05479	0.13	-0.8
979,131	+		BACOVA_05479	0.14	+0.0
979,132	-		BACOVA_05479	0.14	-0.2
979,175	+		BACOVA_05479	0.15	+0.1
979,176	-		BACOVA_05479	0.15	+1.5
979,241	+		BACOVA_05479	0.17	-0.6
979,267	-		BACOVA_05479	0.17	-0.1
979,297	-		BACOVA_05479	0.18	+0.0
979,301	+		BACOVA_05479	0.18	+0.4
979,310	+		BACOVA_05479	0.19	-0.6
979,373	-		BACOVA_05479	0.20	-1.8
979,373	-		BACOVA_05479	0.20	+0.7
979,391	+		BACOVA_05479	0.21	-0.1
979,428	-		BACOVA_05479	0.21	+0.7
979,449	-		BACOVA_05479	0.22	-1.0
979,449	-		BACOVA_05479	0.22	+0.8
979,454	+		BACOVA_05479	0.22	-1.3
979,454	+		BACOVA_05479	0.22	-0.2
979,455	-		BACOVA_05479	0.22	-1.5
979,455	-		BACOVA_05479	0.22	+0.3
979,459	-		BACOVA_05479	0.22	+0.7
979,459	-		BACOVA_05479	0.22	-0.4
979,520	+		BACOVA_05479	0.24	+0.1
979,578	+		BACOVA_05479	0.25	-1.7
979,579	-		BACOVA_05479	0.25	-0.1
979,640	+		BACOVA_05479	0.27	-0.3
979,698	-		BACOVA_05479	0.28	+0.5
979,704	-		BACOVA_05479	0.28	-0.3
979,772	-		BACOVA_05479	0.30	-0.0
979,822	+		BACOVA_05479	0.31	+0.4
979,822	+		BACOVA_05479	0.31	+0.3
979,822	-		BACOVA_05479	0.31	-0.6
979,823	-		BACOVA_05479	0.31	+0.2
979,826	+		BACOVA_05479	0.31	+0.5
979,826	+		BACOVA_05479	0.31	-1.4
979,826	+		BACOVA_05479	0.31	-1.0
979,992	-		BACOVA_05479	0.35	-0.1
979,993	+		BACOVA_05479	0.35	+0.3
979,994	-		BACOVA_05479	0.35	+0.4
980,025	-		BACOVA_05479	0.36	+0.2
980,046	+		BACOVA_05479	0.37	-2.3
980,067	+		BACOVA_05479	0.37	+0.4
980,067	+		BACOVA_05479	0.37	+1.5
980,094	-		BACOVA_05479	0.38	-0.7
980,183	+		BACOVA_05479	0.40	-1.0
980,184	-		BACOVA_05479	0.40	-0.2
980,267	-		BACOVA_05479	0.42	-0.6
980,283	+		BACOVA_05479	0.42	-0.4
980,309	+		BACOVA_05479	0.43	+0.6
980,309	+		BACOVA_05479	0.43	+0.4
980,310	-		BACOVA_05479	0.43	+0.0
980,328	-		BACOVA_05479	0.44	-1.4
980,387	+		BACOVA_05479	0.45	-0.3
980,387	+		BACOVA_05479	0.45	-1.0
980,388	-		BACOVA_05479	0.45	-0.4
980,388	-		BACOVA_05479	0.45	+0.4
980,404	+		BACOVA_05479	0.45	+0.6
980,407	+		BACOVA_05479	0.46	-0.4
980,448	-		BACOVA_05479	0.47	-0.7
980,451	-		BACOVA_05479	0.47	+0.8
980,475	+		BACOVA_05479	0.47	+1.4
980,522	+		BACOVA_05479	0.48	+0.1
980,625	-		BACOVA_05479	0.51	+0.0
980,735	+		BACOVA_05479	0.54	+0.3
980,736	-		BACOVA_05479	0.54	+0.6
980,743	-		BACOVA_05479	0.54	+0.9
980,813	+		BACOVA_05479	0.56	+0.3
980,854	+		BACOVA_05479	0.57	+0.8
980,854	+		BACOVA_05479	0.57	+0.4
980,854	+		BACOVA_05479	0.57	+0.3
980,855	-		BACOVA_05479	0.57	-0.1
980,855	-		BACOVA_05479	0.57	+1.0
980,856	+		BACOVA_05479	0.57	+0.2
980,856	+		BACOVA_05479	0.57	+0.2
980,856	+		BACOVA_05479	0.57	+1.0
980,867	+		BACOVA_05479	0.57	-0.3
980,888	+		BACOVA_05479	0.57	+0.1
980,888	+		BACOVA_05479	0.57	+1.1
980,889	-		BACOVA_05479	0.57	+0.6
980,889	-		BACOVA_05479	0.57	-1.0
980,889	-		BACOVA_05479	0.57	+0.7
980,890	+		BACOVA_05479	0.57	-0.9
980,942	+		BACOVA_05479	0.59	+0.1
981,064	-		BACOVA_05479	0.62	+0.0
981,065	+		BACOVA_05479	0.62	+0.7
981,065	+		BACOVA_05479	0.62	-0.1
981,066	-		BACOVA_05479	0.62	+0.2
981,066	-		BACOVA_05479	0.62	-0.8
981,066	-		BACOVA_05479	0.62	+1.3
981,066	-		BACOVA_05479	0.62	+0.0
981,192	-		BACOVA_05479	0.65	-0.3
981,211	-		BACOVA_05479	0.65	-0.3
981,256	+		BACOVA_05479	0.66	-0.7
981,259	-		BACOVA_05479	0.66	+0.7
981,259	-		BACOVA_05479	0.66	-1.2
981,354	+		BACOVA_05479	0.69	-0.4
981,355	-		BACOVA_05479	0.69	+0.2
981,355	-		BACOVA_05479	0.69	-0.1
981,356	+		BACOVA_05479	0.69	+0.1
981,356	+		BACOVA_05479	0.69	-0.2
981,357	-		BACOVA_05479	0.69	+0.6
981,357	-		BACOVA_05479	0.69	+0.0
981,357	-		BACOVA_05479	0.69	-0.2
981,358	+		BACOVA_05479	0.69	-0.3
981,358	+		BACOVA_05479	0.69	+0.1
981,358	+		BACOVA_05479	0.69	-0.5
981,360	+		BACOVA_05479	0.69	+0.1
981,360	+		BACOVA_05479	0.69	-0.1
981,360	+		BACOVA_05479	0.69	+0.2
981,360	+		BACOVA_05479	0.69	+0.5
981,361	-		BACOVA_05479	0.69	-0.6
981,361	-		BACOVA_05479	0.69	+0.0
981,361	-		BACOVA_05479	0.69	-0.0
981,382	-		BACOVA_05479	0.70	+0.3
981,388	-		BACOVA_05479	0.70	+0.9
981,388	-		BACOVA_05479	0.70	-0.5
981,443	+		BACOVA_05479	0.71	+0.1
981,444	-		BACOVA_05479	0.71	+0.2
981,446	-		BACOVA_05479	0.71	+0.1
981,474	-		BACOVA_05479	0.72	-0.5
981,511	-		BACOVA_05479	0.73	+0.5
981,533	+		BACOVA_05479	0.73	+0.5
981,547	-		BACOVA_05479	0.74	+0.7
981,569	+		BACOVA_05479	0.74	-0.6
981,569	+		BACOVA_05479	0.74	+0.2
981,579	-		BACOVA_05479	0.74	-1.7
981,588	-		BACOVA_05479	0.75	-0.0
981,617	-		BACOVA_05479	0.75	-0.5
981,619	+		BACOVA_05479	0.75	-0.2
981,653	+		BACOVA_05479	0.76	+0.9
981,653	+		BACOVA_05479	0.76	-0.2
981,653	+		BACOVA_05479	0.76	-0.4
981,653	+		BACOVA_05479	0.76	-0.7
981,653	+		BACOVA_05479	0.76	-0.8
981,653	+		BACOVA_05479	0.76	+0.3
981,653	+		BACOVA_05479	0.76	+0.2
981,654	-		BACOVA_05479	0.76	+0.2
981,654	-		BACOVA_05479	0.76	+0.1
981,677	+		BACOVA_05479	0.77	+1.6
981,787	-		BACOVA_05479	0.79	-0.1
981,829	+		BACOVA_05479	0.81	-0.7
981,830	-		BACOVA_05479	0.81	+0.2
981,830	-		BACOVA_05479	0.81	+0.2
981,931	-		BACOVA_05479	0.83	+0.3
981,937	-		BACOVA_05479	0.83	-0.9
981,937	-		BACOVA_05479	0.83	-0.3
981,937	-		BACOVA_05479	0.83	-0.6
981,938	+		BACOVA_05479	0.83	-0.6
981,939	-		BACOVA_05479	0.83	-0.6
982,027	+		BACOVA_05479	0.85	-0.4
982,033	+		BACOVA_05479	0.86	+0.7
982,061	-		BACOVA_05479	0.86	+0.2
982,064	+		BACOVA_05479	0.86	-1.5
982,064	+		BACOVA_05479	0.86	-0.1
982,067	+		BACOVA_05479	0.86	+1.8
982,067	+		BACOVA_05479	0.86	+0.6
982,081	+		BACOVA_05479	0.87	-0.3
982,097	+		BACOVA_05479	0.87	-0.1
982,097	+		BACOVA_05479	0.87	-0.4
982,098	-		BACOVA_05479	0.87	-0.4
982,109	+		BACOVA_05479	0.87	-0.3
982,182	+		BACOVA_05479	0.89	+0.1
982,184	+		BACOVA_05479	0.89	-1.2
982,184	+		BACOVA_05479	0.89	-0.1
982,184	+		BACOVA_05479	0.89	+0.5
982,185	-		BACOVA_05479	0.89	+0.0
982,185	-		BACOVA_05479	0.89	+0.5
982,185	-		BACOVA_05479	0.89	-1.2
982,285	+				-0.7
982,286	-				-0.5
982,362	-				-0.2
982,367	+				-0.6
982,367	+				-0.2
982,389	-				-0.8
982,396	+				+0.8
982,397	-				-0.8
982,421	-				-0.5
982,439	-				+1.7
982,455	-				-0.1
982,455	-				-0.2
982,457	+				-0.5
982,458	-				-1.2
982,522	+				+1.1
982,575	-				+1.7
982,575	-				+0.0
982,575	-				-0.1
982,575	-				-0.1
982,578	+				+0.3
982,607	+				+0.3
982,620	+				-0.9
982,623	+				-0.3
982,624	-				-1.2
982,637	-				-0.2
982,654	+				-0.2
982,668	-				-0.6
982,668	-				+0.8
982,669	+				-0.6
982,669	+				+1.0
982,670	-				+0.4
982,670	-				-0.6
982,677	+				-0.3
982,677	+				+1.3
982,677	+				+0.0
982,695	+		BACOVA_05480	0.17	+0.1
982,702	-		BACOVA_05480	0.22	-0.4
982,711	-		BACOVA_05480	0.28	-0.9
982,735	+		BACOVA_05480	0.45	+0.5
982,748	+		BACOVA_05480	0.54	-0.0
982,774	+		BACOVA_05480	0.72	+0.2
982,774	+		BACOVA_05480	0.72	-0.8
982,775	-		BACOVA_05480	0.73	+0.6
982,820	+				+0.1
982,830	-				+0.5
982,841	-				-0.7
982,850	-				-0.7
982,859	-				-0.6
982,873	-				+1.3
982,891	-				+0.3
982,892	+				-0.8
982,892	+				+0.2
982,893	-				+0.4
982,917	-				-0.3
982,917	-				+0.0
982,917	-				-0.8
983,058	+		BACOVA_05481	0.17	+0.7
983,058	+		BACOVA_05481	0.17	-0.1
983,110	+		BACOVA_05481	0.20	+0.6
983,110	+		BACOVA_05481	0.20	-0.5
983,111	-		BACOVA_05481	0.20	+0.5
983,111	-		BACOVA_05481	0.20	-0.6
983,112	+		BACOVA_05481	0.20	+0.4
983,117	-		BACOVA_05481	0.21	+1.7
983,159	-		BACOVA_05481	0.24	-1.1
983,159	-		BACOVA_05481	0.24	+0.2
983,380	-		BACOVA_05481	0.40	+0.2
983,500	-		BACOVA_05481	0.49	+0.2
983,520	-		BACOVA_05481	0.50	+0.0
983,530	-		BACOVA_05481	0.51	+0.3
983,565	+		BACOVA_05481	0.54	-0.9
983,611	-		BACOVA_05481	0.57	-0.2