Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03209

Experiment: iri MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	iri MOI10
3,345,675	-				+0.0
3,345,691	+				+0.2
3,345,691	+				-1.1
3,345,721	-				+0.6
3,345,725	+				-0.7
3,345,725	+				-0.5
3,345,849	+		OHPLBJKB_03207	0.17	+2.7
3,345,849	+		OHPLBJKB_03207	0.17	-0.6
3,345,849	+		OHPLBJKB_03207	0.17	-0.5
3,345,849	+		OHPLBJKB_03207	0.17	+0.1
3,345,850	-		OHPLBJKB_03207	0.17	-1.6
3,345,897	+		OHPLBJKB_03207	0.26	-0.4
3,345,897	+		OHPLBJKB_03207	0.26	+0.5
3,346,090	+		OHPLBJKB_03207	0.62	-1.0
3,346,090	+		OHPLBJKB_03207	0.62	+1.7
3,346,091	-		OHPLBJKB_03207	0.62	-1.5
3,346,215	-		OHPLBJKB_03207	0.86	-0.2
3,346,301	+				-0.2
3,346,301	+				-0.5
3,346,301	+				+1.1
3,346,301	+				+0.7
3,346,301	+				+0.4
3,346,302	-				+0.2
3,346,302	-				-0.1
3,346,302	-				+0.9
3,346,302	-				-0.5
3,346,302	-				-0.8
3,346,302	-				+0.4
3,346,302	-				+0.5
3,346,302	-				+0.0
3,346,302	-				-0.8
3,346,302	-				-0.8
3,346,302	-				-0.5
3,346,302	-				-0.3
3,346,411	+		OHPLBJKB_03208	0.67	+0.3
3,346,412	-		OHPLBJKB_03208	0.68	-0.5
3,346,422	+		OHPLBJKB_03208	0.74	+1.0
3,346,468	+				+0.2
3,346,468	+				-1.1
3,346,559	+				+0.3
3,346,560	-				+0.8
3,346,560	-				-0.2
3,346,560	-				-2.5
3,346,560	-				-0.6
3,346,561	+				-0.7
3,346,562	-				-0.7
3,346,653	+				+0.0
3,346,653	+				+0.1
3,346,653	+				-0.7
3,346,654	-				+0.5
3,346,654	-				-0.1
3,346,654	-				+0.2
3,346,673	+				-0.1
3,346,674	-				+0.1
3,346,720	+				+0.1
3,346,818	+				-0.3
3,346,840	-				-0.2
3,346,846	-				-0.9
3,346,868	+				+0.8
3,346,869	-				+0.0
3,346,980	+				-0.7
3,346,980	+				-0.3
3,347,037	+		OHPLBJKB_03209	0.11	+1.1
3,347,037	+		OHPLBJKB_03209	0.11	+1.0
3,347,037	+		OHPLBJKB_03209	0.11	-0.5
3,347,038	-		OHPLBJKB_03209	0.11	+0.4
3,347,038	-		OHPLBJKB_03209	0.11	-0.4
3,347,040	+		OHPLBJKB_03209	0.11	-0.0
3,347,041	-		OHPLBJKB_03209	0.11	-0.6
3,347,151	+		OHPLBJKB_03209	0.14	+0.6
3,347,151	+		OHPLBJKB_03209	0.14	+1.4
3,347,152	-		OHPLBJKB_03209	0.14	-0.2
3,347,152	-		OHPLBJKB_03209	0.14	+0.6
3,347,152	-		OHPLBJKB_03209	0.14	-0.5
3,347,152	-		OHPLBJKB_03209	0.14	-0.5
3,347,155	+		OHPLBJKB_03209	0.14	-0.5
3,347,156	-		OHPLBJKB_03209	0.14	+1.2
3,347,156	-		OHPLBJKB_03209	0.14	-1.1
3,347,173	-		OHPLBJKB_03209	0.15	+0.5
3,347,173	-		OHPLBJKB_03209	0.15	-0.5
3,347,196	+		OHPLBJKB_03209	0.15	+0.3
3,347,258	-		OHPLBJKB_03209	0.17	+1.1
3,347,275	+		OHPLBJKB_03209	0.18	+0.8
3,347,358	+		OHPLBJKB_03209	0.20	-0.4
3,347,359	-		OHPLBJKB_03209	0.20	-1.8
3,347,359	-		OHPLBJKB_03209	0.20	+1.1
3,347,359	-		OHPLBJKB_03209	0.20	-0.5
3,347,359	-		OHPLBJKB_03209	0.20	-1.3
3,347,366	+		OHPLBJKB_03209	0.21	+1.1
3,347,366	+		OHPLBJKB_03209	0.21	+1.5
3,347,366	+		OHPLBJKB_03209	0.21	+0.1
3,347,366	+		OHPLBJKB_03209	0.21	+0.2
3,347,366	+		OHPLBJKB_03209	0.21	+0.4
3,347,367	-		OHPLBJKB_03209	0.21	-1.2
3,347,367	-		OHPLBJKB_03209	0.21	-0.8
3,347,367	-		OHPLBJKB_03209	0.21	-0.5
3,347,367	-		OHPLBJKB_03209	0.21	-0.3
3,347,367	-		OHPLBJKB_03209	0.21	+0.1
3,347,367	-		OHPLBJKB_03209	0.21	+1.2
3,347,367	-		OHPLBJKB_03209	0.21	+0.4
3,347,367	-		OHPLBJKB_03209	0.21	+7.5
3,347,370	+		OHPLBJKB_03209	0.21	-0.2
3,347,370	+		OHPLBJKB_03209	0.21	+0.9
3,347,379	+		OHPLBJKB_03209	0.21	-1.1
3,347,380	-		OHPLBJKB_03209	0.21	-0.3
3,347,380	-		OHPLBJKB_03209	0.21	+1.0
3,347,382	+		OHPLBJKB_03209	0.21	+0.9
3,347,382	+		OHPLBJKB_03209	0.21	+0.4
3,347,383	-		OHPLBJKB_03209	0.21	+0.4
3,347,390	+		OHPLBJKB_03209	0.21	-0.6
3,347,390	+		OHPLBJKB_03209	0.21	-0.8
3,347,555	+		OHPLBJKB_03209	0.26	+0.4
3,347,555	+		OHPLBJKB_03209	0.26	+0.4
3,347,556	-		OHPLBJKB_03209	0.26	-0.4
3,347,556	-		OHPLBJKB_03209	0.26	+0.2
3,347,658	+		OHPLBJKB_03209	0.29	+0.5
3,347,658	+		OHPLBJKB_03209	0.29	+0.2
3,347,886	+		OHPLBJKB_03209	0.36	+0.8
3,347,887	-		OHPLBJKB_03209	0.36	-0.2
3,347,891	+		OHPLBJKB_03209	0.36	+0.7
3,347,891	+		OHPLBJKB_03209	0.36	-0.5
3,347,891	+		OHPLBJKB_03209	0.36	+0.2
3,347,891	+		OHPLBJKB_03209	0.36	+0.4
3,347,892	-		OHPLBJKB_03209	0.36	-0.1
3,347,897	+		OHPLBJKB_03209	0.36	-0.5
3,347,897	+		OHPLBJKB_03209	0.36	-0.2
3,348,013	+		OHPLBJKB_03209	0.40	-0.3
3,348,224	-		OHPLBJKB_03209	0.46	+0.5
3,348,339	+		OHPLBJKB_03209	0.49	+0.1
3,348,576	+		OHPLBJKB_03209	0.57	+0.0
3,348,577	-		OHPLBJKB_03209	0.57	-1.3
3,348,697	+		OHPLBJKB_03209	0.60	+1.2
3,348,697	+		OHPLBJKB_03209	0.60	-0.3
3,348,697	+		OHPLBJKB_03209	0.60	-0.2
3,348,698	-		OHPLBJKB_03209	0.60	-0.8
3,348,996	+		OHPLBJKB_03209	0.69	+0.3
3,349,042	-		OHPLBJKB_03209	0.70	+0.2
3,349,147	+		OHPLBJKB_03209	0.74	-0.6
3,349,147	+		OHPLBJKB_03209	0.74	+0.5
3,349,147	+		OHPLBJKB_03209	0.74	-0.8
3,349,288	+		OHPLBJKB_03209	0.78	+0.5
3,349,288	+		OHPLBJKB_03209	0.78	-0.3
3,349,288	+		OHPLBJKB_03209	0.78	+0.2
3,349,289	-		OHPLBJKB_03209	0.78	-0.4
3,349,325	+		OHPLBJKB_03209	0.79	-0.1
3,349,326	-		OHPLBJKB_03209	0.79	+1.2
3,349,326	-		OHPLBJKB_03209	0.79	-0.9
3,349,326	-		OHPLBJKB_03209	0.79	-1.4
3,349,380	+		OHPLBJKB_03209	0.80	+0.8
3,349,380	+		OHPLBJKB_03209	0.80	+0.7
3,349,381	-		OHPLBJKB_03209	0.80	-0.5
3,349,381	-		OHPLBJKB_03209	0.80	-0.4
3,349,450	+		OHPLBJKB_03209	0.83	-0.4
3,349,450	+		OHPLBJKB_03209	0.83	-0.3
3,349,450	+		OHPLBJKB_03209	0.83	-0.1
3,349,450	+		OHPLBJKB_03209	0.83	-0.7
3,349,450	+		OHPLBJKB_03209	0.83	+0.8
3,349,451	-		OHPLBJKB_03209	0.83	-0.5
3,349,451	-		OHPLBJKB_03209	0.83	-0.3
3,349,451	-		OHPLBJKB_03209	0.83	+0.1
3,349,451	-		OHPLBJKB_03209	0.83	+0.8
3,349,451	-		OHPLBJKB_03209	0.83	-0.4
3,349,451	-		OHPLBJKB_03209	0.83	+0.4
3,349,520	+		OHPLBJKB_03209	0.85	+0.1
3,349,520	+		OHPLBJKB_03209	0.85	+0.2
3,349,520	+		OHPLBJKB_03209	0.85	+0.6
3,349,520	+		OHPLBJKB_03209	0.85	+1.1
3,349,520	+		OHPLBJKB_03209	0.85	-0.3
3,349,520	+		OHPLBJKB_03209	0.85	+0.0
3,349,520	+		OHPLBJKB_03209	0.85	+0.4
3,349,520	+		OHPLBJKB_03209	0.85	-1.2
3,349,521	-		OHPLBJKB_03209	0.85	+0.4
3,349,521	-		OHPLBJKB_03209	0.85	-0.1
3,349,521	-		OHPLBJKB_03209	0.85	+0.1
3,349,521	-		OHPLBJKB_03209	0.85	+1.1
3,349,521	-		OHPLBJKB_03209	0.85	-0.6
3,349,521	-		OHPLBJKB_03209	0.85	-0.1
3,349,521	-		OHPLBJKB_03209	0.85	-0.6
3,349,521	-		OHPLBJKB_03209	0.85	+0.2
3,349,521	-		OHPLBJKB_03209	0.85	-0.6
3,349,575	+		OHPLBJKB_03209	0.86	-0.3
3,349,576	-		OHPLBJKB_03209	0.86	-0.5
3,349,577	+		OHPLBJKB_03209	0.86	-1.1
3,349,577	+		OHPLBJKB_03209	0.86	-0.9
3,349,577	+		OHPLBJKB_03209	0.86	+0.4
3,349,577	+		OHPLBJKB_03209	0.86	-0.1
3,349,577	+		OHPLBJKB_03209	0.86	-1.8
3,349,578	-		OHPLBJKB_03209	0.86	-0.0
3,349,578	-		OHPLBJKB_03209	0.86	-0.2
3,349,701	+				+0.2
3,349,702	-				+0.1
3,349,702	-				+0.7
3,349,800	+				-0.7
3,349,818	+				-0.1
3,349,818	+				+0.2
3,349,818	+				-0.2
3,349,818	+				+0.6
3,349,819	-				+0.6
3,349,819	-				-1.6
3,349,819	-				-1.6
3,349,819	-				-0.1
3,349,876	+				-0.8
3,349,961	-				-2.5
3,349,984	-				+0.5
3,350,018	+				-0.2
3,350,019	-				-1.3
3,350,019	-				-0.6
3,350,031	+				-0.8
3,350,031	+				-0.2
3,350,031	+				+0.3
3,350,031	+				+0.1
3,350,031	+				-0.3
3,350,031	+				+0.7
3,350,031	+				+0.7
3,350,031	+				-1.1
3,350,031	+				-0.0
3,350,032	-				+0.6
3,350,032	-				+0.3
3,350,032	-				-0.2
3,350,032	-				+0.7
3,350,032	-				-0.1
3,350,032	-				-0.3
3,350,117	+				-1.0
3,350,118	-				+0.3
3,350,208	+				+0.4
3,350,208	+				+0.6
3,350,208	+				+1.0
3,350,209	-				-0.7
3,350,209	-				-0.8
3,350,209	-				+0.6
3,350,209	-				-0.6
3,350,209	-				+1.8
3,350,209	-				+0.2
3,350,303	-		OHPLBJKB_03210	0.21	-0.8
3,350,318	-		OHPLBJKB_03210	0.24	+0.7
3,350,318	-		OHPLBJKB_03210	0.24	-0.4
3,350,340	-		OHPLBJKB_03210	0.27	+0.4
3,350,369	-		OHPLBJKB_03210	0.31	+0.7
3,350,400	+		OHPLBJKB_03210	0.36	+1.0
3,350,400	+		OHPLBJKB_03210	0.36	+1.0
3,350,419	+		OHPLBJKB_03210	0.39	-1.0
3,350,419	+		OHPLBJKB_03210	0.39	+0.0
3,350,420	-		OHPLBJKB_03210	0.39	-1.0
3,350,420	-		OHPLBJKB_03210	0.39	-0.2
3,350,420	-		OHPLBJKB_03210	0.39	+0.0
3,350,474	+		OHPLBJKB_03210	0.48	-0.6
3,350,476	+		OHPLBJKB_03210	0.48	+0.4
3,350,476	+		OHPLBJKB_03210	0.48	+0.4
3,350,476	+		OHPLBJKB_03210	0.48	-1.5
3,350,477	-		OHPLBJKB_03210	0.48	-1.2
3,350,477	-		OHPLBJKB_03210	0.48	-0.9
3,350,490	-		OHPLBJKB_03210	0.50	-0.1
3,350,534	+		OHPLBJKB_03210	0.57	+0.6
3,350,534	+		OHPLBJKB_03210	0.57	-0.3
3,350,534	+		OHPLBJKB_03210	0.57	+0.6
3,350,534	+		OHPLBJKB_03210	0.57	+1.1
3,350,538	-		OHPLBJKB_03210	0.58	-0.0
3,350,538	-		OHPLBJKB_03210	0.58	+1.5
3,350,547	-		OHPLBJKB_03210	0.59	-0.3
3,350,547	-		OHPLBJKB_03210	0.59	-0.7
3,350,549	+		OHPLBJKB_03210	0.59	-0.6
3,350,584	-		OHPLBJKB_03210	0.65	+0.0
3,350,656	+		OHPLBJKB_03210	0.76	-1.2
3,350,667	+		OHPLBJKB_03210	0.77	+0.5
3,350,668	-		OHPLBJKB_03210	0.78	-1.0
3,350,751	-				+1.1
3,350,812	+				+0.4
3,350,812	+				+0.1
3,350,812	+				-0.3
3,350,813	-				-0.3
3,350,846	-				-1.2
3,350,859	+				-0.5
3,350,859	+				+0.4
3,350,863	+				+0.1
3,350,868	+				+0.2
3,350,880	-				-1.5
3,350,882	+				-0.1
3,350,882	+				-0.6
3,350,882	+				+0.8
3,350,882	+				+0.4
3,350,882	+				+7.3
3,350,883	-				-2.3
3,350,903	-				-1.4
3,350,903	-				-0.2
3,350,949	+				-2.0
3,350,949	+				-1.7
3,350,949	+				-2.0
3,350,949	+				-0.2
3,350,950	-				-1.3
3,350,950	-				-2.4
3,350,950	-				-1.1
3,350,954	-				-0.8
3,350,954	-				-0.7
3,350,954	-				-2.0
3,350,954	-				-1.1
3,350,975	-				-1.2
3,351,013	-				-1.2