Experiment: BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EFB2_00582 and EFB2_00583 are separated by 8 nucleotides EFB2_00583 and EFB2_00584 overlap by 11 nucleotides EFB2_00584 and EFB2_00585 are separated by 67 nucleotides
EFB2_00582: EFB2_00582 - Rod shape-determining protein MreD, at 587,507 to 587,995
_00582
EFB2_00583: EFB2_00583 - dTTP/UTP pyrophosphatase, at 588,004 to 588,597
_00583
EFB2_00584: EFB2_00584 - Ribonuclease G, at 588,587 to 590,056
_00584
EFB2_00585: EFB2_00585 - hypothetical protein, at 590,124 to 593,924
_00585
Position (kb) 588
589
590
591 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 587.965 kb on + strand at 587.965 kb on + strand at 587.993 kb on + strand at 587.993 kb on + strand at 587.993 kb on + strand at 587.993 kb on + strand at 587.993 kb on + strand at 587.994 kb on - strand at 588.003 kb on + strand at 588.003 kb on + strand at 588.003 kb on + strand at 588.003 kb on + strand at 588.003 kb on + strand at 588.004 kb on - strand at 588.004 kb on - strand at 588.016 kb on + strand at 588.016 kb on + strand at 588.016 kb on + strand at 588.016 kb on + strand at 588.016 kb on + strand at 588.016 kb on + strand at 588.017 kb on - strand at 588.020 kb on + strand at 588.020 kb on + strand at 588.020 kb on + strand at 588.020 kb on + strand at 588.020 kb on + strand at 588.020 kb on + strand at 588.020 kb on + strand at 588.021 kb on - strand at 588.021 kb on - strand at 588.021 kb on - strand at 588.050 kb on + strand at 588.050 kb on + strand at 588.050 kb on + strand at 588.050 kb on + strand at 588.051 kb on - strand at 588.051 kb on - strand at 588.051 kb on - strand at 588.081 kb on + strand, within EFB2_00583 at 588.081 kb on + strand, within EFB2_00583 at 588.081 kb on + strand, within EFB2_00583 at 588.081 kb on + strand, within EFB2_00583 at 588.081 kb on + strand, within EFB2_00583 at 588.081 kb on + strand, within EFB2_00583 at 588.081 kb on + strand, within EFB2_00583 at 588.081 kb on + strand, within EFB2_00583 at 588.081 kb on + strand, within EFB2_00583 at 588.081 kb on + strand, within EFB2_00583 at 588.082 kb on - strand, within EFB2_00583 at 588.082 kb on - strand, within EFB2_00583 at 588.082 kb on - strand, within EFB2_00583 at 588.082 kb on - strand, within EFB2_00583 at 588.082 kb on - strand, within EFB2_00583 at 588.082 kb on - strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.133 kb on + strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.134 kb on - strand, within EFB2_00583 at 588.213 kb on + strand, within EFB2_00583 at 588.214 kb on - strand, within EFB2_00583 at 588.216 kb on + strand, within EFB2_00583 at 588.216 kb on + strand, within EFB2_00583 at 588.216 kb on + strand, within EFB2_00583 at 588.216 kb on + strand, within EFB2_00583 at 588.216 kb on + strand, within EFB2_00583 at 588.216 kb on + strand, within EFB2_00583 at 588.217 kb on - strand, within EFB2_00583 at 588.217 kb on - strand, within EFB2_00583 at 588.217 kb on - strand, within EFB2_00583 at 588.217 kb on - strand, within EFB2_00583 at 588.290 kb on + strand, within EFB2_00583 at 588.412 kb on + strand, within EFB2_00583 at 588.412 kb on + strand, within EFB2_00583 at 588.412 kb on + strand, within EFB2_00583 at 588.412 kb on + strand, within EFB2_00583 at 588.412 kb on + strand, within EFB2_00583 at 588.412 kb on + strand, within EFB2_00583 at 588.413 kb on - strand, within EFB2_00583 at 588.413 kb on - strand, within EFB2_00583 at 588.434 kb on + strand, within EFB2_00583 at 588.434 kb on + strand, within EFB2_00583 at 588.435 kb on - strand, within EFB2_00583 at 588.438 kb on + strand, within EFB2_00583 at 588.438 kb on + strand, within EFB2_00583 at 588.438 kb on + strand, within EFB2_00583 at 588.438 kb on + strand, within EFB2_00583 at 588.438 kb on + strand, within EFB2_00583 at 588.439 kb on - strand, within EFB2_00583 at 588.439 kb on - strand, within EFB2_00583 at 588.439 kb on - strand, within EFB2_00583 at 588.439 kb on - strand, within EFB2_00583 at 588.451 kb on + strand, within EFB2_00583 at 588.452 kb on - strand, within EFB2_00583 at 588.457 kb on - strand, within EFB2_00583 at 588.491 kb on + strand, within EFB2_00583 at 588.491 kb on + strand, within EFB2_00583 at 588.491 kb on + strand, within EFB2_00583 at 588.491 kb on + strand, within EFB2_00583 at 588.491 kb on + strand, within EFB2_00583 at 588.491 kb on + strand, within EFB2_00583 at 588.491 kb on + strand, within EFB2_00583 at 588.491 kb on + strand, within EFB2_00583 at 588.491 kb on + strand, within EFB2_00583 at 588.492 kb on - strand, within EFB2_00583 at 588.492 kb on - strand, within EFB2_00583 at 588.492 kb on - strand, within EFB2_00583 at 588.492 kb on - strand, within EFB2_00583 at 588.492 kb on - strand, within EFB2_00583 at 588.545 kb on + strand at 588.545 kb on + strand at 588.546 kb on - strand at 588.546 kb on - strand at 588.548 kb on + strand at 588.548 kb on + strand at 588.548 kb on + strand at 588.548 kb on + strand at 588.548 kb on + strand at 588.549 kb on - strand at 588.552 kb on + strand at 588.612 kb on + strand at 588.638 kb on + strand at 588.638 kb on + strand at 588.638 kb on + strand at 588.638 kb on + strand at 588.638 kb on + strand at 588.639 kb on - strand at 588.639 kb on - strand at 588.639 kb on - strand at 588.639 kb on - strand at 588.639 kb on - strand at 588.640 kb on + strand at 588.640 kb on + strand at 588.640 kb on + strand at 588.641 kb on - strand at 588.641 kb on - strand at 588.641 kb on - strand at 588.641 kb on - strand at 588.641 kb on - strand at 588.653 kb on - strand at 588.653 kb on - strand at 588.696 kb on + strand at 588.696 kb on + strand at 588.696 kb on + strand at 588.696 kb on + strand at 588.696 kb on + strand at 588.696 kb on + strand at 588.696 kb on + strand at 588.696 kb on + strand at 588.697 kb on - strand at 588.697 kb on - strand at 588.699 kb on + strand at 588.699 kb on + strand at 588.699 kb on + strand at 588.700 kb on - strand at 588.700 kb on - strand at 588.706 kb on + strand at 588.706 kb on + strand at 588.706 kb on + strand at 588.706 kb on + strand at 588.707 kb on - strand at 588.710 kb on + strand at 588.710 kb on + strand at 588.710 kb on + strand at 588.710 kb on + strand at 588.710 kb on + strand at 588.710 kb on + strand at 588.710 kb on + strand at 588.710 kb on + strand at 588.710 kb on + strand at 588.711 kb on - strand at 588.711 kb on - strand at 588.711 kb on - strand at 588.711 kb on - strand at 588.711 kb on - strand at 588.711 kb on - strand at 588.711 kb on - strand at 588.711 kb on - strand at 588.711 kb on - strand at 588.723 kb on + strand at 588.723 kb on + strand at 588.723 kb on + strand at 588.723 kb on + strand at 588.723 kb on + strand at 588.723 kb on + strand at 588.723 kb on + strand at 588.723 kb on + strand at 588.724 kb on - strand at 588.732 kb on + strand at 588.732 kb on + strand at 588.732 kb on + strand at 588.732 kb on + strand at 588.732 kb on + strand at 588.733 kb on - strand at 588.759 kb on + strand, within EFB2_00584 at 588.759 kb on + strand, within EFB2_00584 at 588.759 kb on + strand, within EFB2_00584 at 588.763 kb on + strand, within EFB2_00584 at 588.763 kb on + strand, within EFB2_00584 at 588.763 kb on + strand, within EFB2_00584 at 588.763 kb on + strand, within EFB2_00584 at 588.763 kb on + strand, within EFB2_00584 at 588.928 kb on + strand, within EFB2_00584 at 588.929 kb on - strand, within EFB2_00584 at 588.929 kb on - strand, within EFB2_00584 at 588.972 kb on - strand, within EFB2_00584 at 588.982 kb on + strand, within EFB2_00584 at 588.983 kb on - strand, within EFB2_00584 at 588.983 kb on - strand, within EFB2_00584 at 588.983 kb on - strand, within EFB2_00584 at 589.067 kb on + strand, within EFB2_00584 at 589.067 kb on + strand, within EFB2_00584 at 589.067 kb on + strand, within EFB2_00584 at 589.068 kb on - strand, within EFB2_00584 at 589.090 kb on + strand, within EFB2_00584 at 589.174 kb on + strand, within EFB2_00584 at 589.174 kb on + strand, within EFB2_00584 at 589.175 kb on - strand, within EFB2_00584 at 589.184 kb on - strand, within EFB2_00584 at 589.301 kb on + strand, within EFB2_00584 at 589.301 kb on + strand, within EFB2_00584 at 589.301 kb on + strand, within EFB2_00584 at 589.301 kb on + strand, within EFB2_00584 at 589.301 kb on + strand, within EFB2_00584 at 589.302 kb on - strand, within EFB2_00584 at 589.302 kb on - strand, within EFB2_00584 at 589.302 kb on - strand, within EFB2_00584 at 589.321 kb on + strand, within EFB2_00584 at 589.321 kb on + strand, within EFB2_00584 at 589.331 kb on + strand, within EFB2_00584 at 589.331 kb on + strand, within EFB2_00584 at 589.331 kb on + strand, within EFB2_00584 at 589.331 kb on + strand, within EFB2_00584 at 589.331 kb on + strand, within EFB2_00584 at 589.331 kb on + strand, within EFB2_00584 at 589.331 kb on + strand, within EFB2_00584 at 589.332 kb on - strand, within EFB2_00584 at 589.332 kb on - strand, within EFB2_00584 at 589.332 kb on - strand, within EFB2_00584 at 589.332 kb on - strand, within EFB2_00584 at 589.332 kb on - strand, within EFB2_00584 at 589.332 kb on - strand, within EFB2_00584 at 589.364 kb on + strand, within EFB2_00584 at 589.364 kb on + strand, within EFB2_00584 at 589.364 kb on + strand, within EFB2_00584 at 589.364 kb on + strand, within EFB2_00584 at 589.364 kb on + strand, within EFB2_00584 at 589.364 kb on + strand, within EFB2_00584 at 589.364 kb on + strand, within EFB2_00584 at 589.364 kb on + strand, within EFB2_00584 at 589.364 kb on + strand, within EFB2_00584 at 589.364 kb on + strand, within EFB2_00584 at 589.364 kb on + strand, within EFB2_00584 at 589.365 kb on - strand, within EFB2_00584 at 589.365 kb on - strand, within EFB2_00584 at 589.365 kb on - strand, within EFB2_00584 at 589.365 kb on - strand, within EFB2_00584 at 589.365 kb on - strand, within EFB2_00584 at 589.365 kb on - strand, within EFB2_00584 at 589.365 kb on - strand, within EFB2_00584 at 589.365 kb on - strand, within EFB2_00584 at 589.365 kb on - strand, within EFB2_00584 at 589.365 kb on - strand, within EFB2_00584 at 589.437 kb on + strand, within EFB2_00584 at 589.437 kb on + strand, within EFB2_00584 at 589.437 kb on + strand, within EFB2_00584 at 589.437 kb on + strand, within EFB2_00584 at 589.437 kb on + strand, within EFB2_00584 at 589.438 kb on - strand, within EFB2_00584 at 589.438 kb on - strand, within EFB2_00584 at 589.438 kb on - strand, within EFB2_00584 at 589.438 kb on - strand, within EFB2_00584 at 589.438 kb on - strand, within EFB2_00584 at 589.504 kb on + strand, within EFB2_00584 at 589.553 kb on - strand, within EFB2_00584 at 589.558 kb on + strand, within EFB2_00584 at 589.559 kb on - strand, within EFB2_00584 at 589.559 kb on - strand, within EFB2_00584 at 589.590 kb on + strand, within EFB2_00584 at 589.615 kb on + strand, within EFB2_00584 at 589.616 kb on - strand, within EFB2_00584 at 589.616 kb on - strand, within EFB2_00584 at 589.616 kb on - strand, within EFB2_00584 at 589.622 kb on - strand, within EFB2_00584 at 589.642 kb on + strand, within EFB2_00584 at 589.756 kb on + strand, within EFB2_00584 at 589.757 kb on - strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.785 kb on + strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.786 kb on - strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.788 kb on + strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.789 kb on - strand, within EFB2_00584 at 589.792 kb on + strand, within EFB2_00584 at 589.792 kb on + strand, within EFB2_00584 at 589.792 kb on + strand, within EFB2_00584 at 589.792 kb on + strand, within EFB2_00584 at 589.792 kb on + strand, within EFB2_00584 at 589.792 kb on + strand, within EFB2_00584 at 589.792 kb on + strand, within EFB2_00584 at 589.792 kb on + strand, within EFB2_00584 at 589.792 kb on + strand, within EFB2_00584 at 589.792 kb on + strand, within EFB2_00584 at 589.793 kb on - strand, within EFB2_00584 at 589.793 kb on - strand, within EFB2_00584 at 589.793 kb on - strand, within EFB2_00584 at 589.793 kb on - strand, within EFB2_00584 at 589.793 kb on - strand, within EFB2_00584 at 589.793 kb on - strand, within EFB2_00584 at 589.793 kb on - strand, within EFB2_00584 at 589.793 kb on - strand, within EFB2_00584 at 589.793 kb on - strand, within EFB2_00584 at 589.844 kb on + strand, within EFB2_00584 at 589.845 kb on + strand, within EFB2_00584 at 589.845 kb on + strand, within EFB2_00584 at 589.846 kb on - strand, within EFB2_00584 at 589.846 kb on - strand, within EFB2_00584 at 589.846 kb on - strand, within EFB2_00584 at 589.846 kb on - strand, within EFB2_00584 at 589.846 kb on - strand, within EFB2_00584 at 589.850 kb on + strand, within EFB2_00584 at 589.850 kb on + strand, within EFB2_00584 at 589.850 kb on + strand, within EFB2_00584 at 589.850 kb on + strand, within EFB2_00584 at 589.850 kb on + strand, within EFB2_00584 at 589.850 kb on + strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.851 kb on - strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.889 kb on + strand, within EFB2_00584 at 589.890 kb on - strand, within EFB2_00584 at 589.890 kb on - strand, within EFB2_00584 at 589.890 kb on - strand, within EFB2_00584 at 589.890 kb on - strand, within EFB2_00584 at 589.890 kb on - strand, within EFB2_00584 at 589.890 kb on - strand, within EFB2_00584 at 589.890 kb on - strand, within EFB2_00584 at 589.890 kb on - strand, within EFB2_00584 at 589.890 kb on - strand, within EFB2_00584 at 589.890 kb on - strand, within EFB2_00584 at 589.913 kb on + strand at 589.913 kb on + strand at 589.913 kb on + strand at 589.913 kb on + strand at 589.913 kb on + strand at 589.913 kb on + strand at 589.913 kb on + strand at 589.913 kb on + strand at 589.913 kb on + strand at 589.913 kb on + strand at 589.913 kb on + strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.914 kb on - strand at 589.929 kb on + strand at 589.930 kb on - strand at 589.990 kb on + strand at 589.990 kb on + strand at 589.990 kb on + strand at 589.991 kb on - strand at 589.999 kb on + strand at 589.999 kb on + strand at 590.000 kb on - strand at 590.000 kb on - strand at 590.000 kb on - strand at 590.004 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.021 kb on + strand at 590.022 kb on - strand at 590.022 kb on - strand at 590.022 kb on - strand at 590.022 kb on - strand at 590.022 kb on - strand at 590.022 kb on - strand at 590.022 kb on - strand at 590.046 kb on + strand at 590.046 kb on + strand at 590.046 kb on + strand at 590.046 kb on + strand at 590.047 kb on - strand at 590.047 kb on - strand at 590.047 kb on - strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.054 kb on + strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.055 kb on - strand at 590.143 kb on + strand at 590.143 kb on + strand at 590.143 kb on + strand at 590.143 kb on + strand at 590.144 kb on - strand at 590.144 kb on - strand at 590.146 kb on + strand at 590.146 kb on + strand at 590.146 kb on + strand at 590.146 kb on + strand at 590.146 kb on + strand at 590.146 kb on + strand at 590.146 kb on + strand at 590.146 kb on + strand at 590.147 kb on - strand at 590.147 kb on - strand at 590.147 kb on - strand at 590.147 kb on - strand at 590.147 kb on - strand at 590.147 kb on - strand at 590.147 kb on - strand at 590.147 kb on - strand at 590.147 kb on - strand at 590.147 kb on - strand at 590.153 kb on + strand at 590.153 kb on + strand at 590.154 kb on - strand at 590.154 kb on - strand at 590.154 kb on - strand at 590.154 kb on - strand at 590.204 kb on + strand at 590.255 kb on - strand at 590.255 kb on - strand at 590.353 kb on + strand at 590.353 kb on + strand at 590.354 kb on - strand at 590.354 kb on - strand at 590.354 kb on - strand at 590.354 kb on - strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.419 kb on + strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.420 kb on - strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.423 kb on + strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.424 kb on - strand at 590.483 kb on + strand at 590.483 kb on + strand at 590.483 kb on + strand at 590.483 kb on + strand at 590.483 kb on + strand at 590.483 kb on + strand at 590.483 kb on + strand at 590.483 kb on + strand at 590.484 kb on - strand at 590.484 kb on - strand at 590.484 kb on - strand at 590.501 kb on + strand at 590.501 kb on + strand at 590.502 kb on - strand at 590.507 kb on + strand, within EFB2_00585 at 590.507 kb on + strand, within EFB2_00585 at 590.507 kb on + strand, within EFB2_00585 at 590.508 kb on - strand, within EFB2_00585 at 590.508 kb on - strand, within EFB2_00585 at 590.677 kb on + strand, within EFB2_00585 at 590.678 kb on - strand, within EFB2_00585 at 590.678 kb on - strand, within EFB2_00585 at 590.678 kb on - strand, within EFB2_00585 at 590.723 kb on + strand, within EFB2_00585 at 590.752 kb on + strand, within EFB2_00585 at 590.752 kb on + strand, within EFB2_00585 at 590.752 kb on + strand, within EFB2_00585 at 590.752 kb on + strand, within EFB2_00585 at 590.810 kb on + strand, within EFB2_00585 at 590.811 kb on - strand, within EFB2_00585 at 590.828 kb on + strand, within EFB2_00585 at 590.828 kb on + strand, within EFB2_00585 at 590.828 kb on + strand, within EFB2_00585 at 590.828 kb on + strand, within EFB2_00585 at 590.829 kb on - strand, within EFB2_00585 at 590.829 kb on - strand, within EFB2_00585 at 590.829 kb on - strand, within EFB2_00585 at 590.829 kb on - strand, within EFB2_00585 at 590.829 kb on - strand, within EFB2_00585 at 590.890 kb on + strand, within EFB2_00585 at 590.890 kb on + strand, within EFB2_00585 at 590.890 kb on + strand, within EFB2_00585 at 590.890 kb on + strand, within EFB2_00585 at 590.890 kb on + strand, within EFB2_00585 at 590.891 kb on - strand, within EFB2_00585 at 590.891 kb on - strand, within EFB2_00585 at 590.891 kb on - strand, within EFB2_00585 at 590.891 kb on - strand, within EFB2_00585 at 590.891 kb on - strand, within EFB2_00585 at 590.891 kb on - strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.954 kb on + strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.955 kb on - strand, within EFB2_00585 at 590.969 kb on + strand, within EFB2_00585 at 590.969 kb on + strand, within EFB2_00585 at 590.984 kb on + strand, within EFB2_00585 at 590.984 kb on + strand, within EFB2_00585 at 590.985 kb on - strand, within EFB2_00585 at 590.985 kb on - strand, within EFB2_00585 at 590.985 kb on - strand, within EFB2_00585 at 590.985 kb on - strand, within EFB2_00585 at 590.985 kb on - strand, within EFB2_00585 at 590.985 kb on - strand, within EFB2_00585 at 590.985 kb on - strand, within EFB2_00585 at 590.987 kb on + strand, within EFB2_00585 at 590.987 kb on + strand, within EFB2_00585 at 590.987 kb on + strand, within EFB2_00585 at 590.987 kb on + strand, within EFB2_00585 at 590.988 kb on - strand, within EFB2_00585 at 590.988 kb on - strand, within EFB2_00585 at 590.988 kb on - strand, within EFB2_00585 at 590.988 kb on - strand, within EFB2_00585 at 591.017 kb on + strand, within EFB2_00585 at 591.017 kb on + strand, within EFB2_00585 at 591.017 kb on + strand, within EFB2_00585 at 591.017 kb on + strand, within EFB2_00585 at 591.018 kb on - strand, within EFB2_00585 at 591.018 kb on - strand, within EFB2_00585 at 591.018 kb on - strand, within EFB2_00585
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) remove 587,965 + +0.7 587,965 + -1.9 587,993 + +0.8 587,993 + +1.2 587,993 + +1.0 587,993 + +0.2 587,993 + -0.5 587,994 - -1.3 588,003 + +2.3 588,003 + +0.1 588,003 + -3.3 588,003 + +1.1 588,003 + -0.5 588,004 - -2.6 588,004 - -2.4 588,016 + -0.5 588,016 + -0.6 588,016 + +0.1 588,016 + +1.0 588,016 + -1.0 588,016 + -0.4 588,017 - +1.6 588,020 + -0.4 588,020 + +1.1 588,020 + +0.6 588,020 + -1.1 588,020 + -0.1 588,020 + -0.4 588,020 + +0.6 588,021 - -1.5 588,021 - -1.6 588,021 - -1.7 588,050 + -1.1 588,050 + -4.0 588,050 + -1.0 588,050 + +0.8 588,051 - +1.8 588,051 - -0.9 588,051 - -0.9 588,081 + EFB2_00583 0.13 +0.1 588,081 + EFB2_00583 0.13 +0.7 588,081 + EFB2_00583 0.13 -2.3 588,081 + EFB2_00583 0.13 -0.2 588,081 + EFB2_00583 0.13 +0.5 588,081 + EFB2_00583 0.13 +0.0 588,081 + EFB2_00583 0.13 +0.5 588,081 + EFB2_00583 0.13 +0.3 588,081 + EFB2_00583 0.13 +1.4 588,081 + EFB2_00583 0.13 -3.3 588,082 - 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Or see this region's nucleotide sequence