Strain Fitness in Escherichia fergusonii Becca around EFB2_00427

Experiment: BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)
451,641	+		EFB2_00426	0.46	-0.3
451,641	+		EFB2_00426	0.46	-0.2
451,642	-		EFB2_00426	0.46	+0.6
451,648	+		EFB2_00426	0.46	-0.5
451,648	+		EFB2_00426	0.46	-0.9
451,648	+		EFB2_00426	0.46	-0.3
451,648	+		EFB2_00426	0.46	-3.3
451,648	+		EFB2_00426	0.46	+0.5
451,648	+		EFB2_00426	0.46	+1.3
451,648	+		EFB2_00426	0.46	-1.1
451,649	-		EFB2_00426	0.46	-2.9
451,649	-		EFB2_00426	0.46	-1.7
451,649	-		EFB2_00426	0.46	-0.8
451,649	-		EFB2_00426	0.46	+1.4
451,649	-		EFB2_00426	0.46	-1.2
451,649	-		EFB2_00426	0.46	+0.4
451,708	+		EFB2_00426	0.50	+0.3
451,708	+		EFB2_00426	0.50	-0.2
451,709	-		EFB2_00426	0.50	-0.5
451,736	+		EFB2_00426	0.51	+1.1
451,736	+		EFB2_00426	0.51	+0.3
451,736	+		EFB2_00426	0.51	-0.7
451,736	+		EFB2_00426	0.51	+0.3
451,736	+		EFB2_00426	0.51	-0.4
451,736	+		EFB2_00426	0.51	-0.5
451,736	+		EFB2_00426	0.51	+1.6
451,736	+		EFB2_00426	0.51	+0.2
451,736	+		EFB2_00426	0.51	-3.1
451,736	+		EFB2_00426	0.51	-0.5
451,736	+		EFB2_00426	0.51	-2.5
451,736	+		EFB2_00426	0.51	+0.2
451,736	+		EFB2_00426	0.51	-0.2
451,736	+		EFB2_00426	0.51	+0.4
451,736	+		EFB2_00426	0.51	+0.9
451,736	+		EFB2_00426	0.51	+0.4
451,736	+		EFB2_00426	0.51	-0.0
451,736	+		EFB2_00426	0.51	-2.2
451,737	-		EFB2_00426	0.51	-0.1
451,737	-		EFB2_00426	0.51	-3.4
451,737	-		EFB2_00426	0.51	+0.6
451,737	-		EFB2_00426	0.51	-2.7
451,737	-		EFB2_00426	0.51	-0.1
451,737	-		EFB2_00426	0.51	-0.4
451,737	-		EFB2_00426	0.51	-0.2
451,737	-		EFB2_00426	0.51	+0.9
451,737	-		EFB2_00426	0.51	-1.0
451,737	-		EFB2_00426	0.51	-0.5
451,737	-		EFB2_00426	0.51	-1.1
451,737	-		EFB2_00426	0.51	+0.8
451,737	-		EFB2_00426	0.51	-1.2
451,737	-		EFB2_00426	0.51	-0.0
451,737	-		EFB2_00426	0.51	+1.2
451,737	-		EFB2_00426	0.51	-0.1
451,737	-		EFB2_00426	0.51	-1.4
451,737	-		EFB2_00426	0.51	+1.0
451,737	-		EFB2_00426	0.51	-2.6
451,737	-		EFB2_00426	0.51	-1.8
451,737	-		EFB2_00426	0.51	-0.9
451,737	-		EFB2_00426	0.51	+0.5
451,781	+		EFB2_00426	0.54	+0.5
451,782	-		EFB2_00426	0.54	+1.1
451,837	-		EFB2_00426	0.57	-0.7
451,837	-		EFB2_00426	0.57	-0.0
451,837	-		EFB2_00426	0.57	+0.7
451,851	-		EFB2_00426	0.58	+1.1
451,873	+		EFB2_00426	0.59	+1.8
451,874	-		EFB2_00426	0.59	+0.8
451,874	-		EFB2_00426	0.59	+2.1
451,938	+		EFB2_00426	0.63	-0.4
451,938	+		EFB2_00426	0.63	+1.7
451,938	+		EFB2_00426	0.63	-0.4
451,939	-		EFB2_00426	0.63	+0.4
451,939	-		EFB2_00426	0.63	-3.5
451,939	-		EFB2_00426	0.63	+0.0
451,939	-		EFB2_00426	0.63	-2.3
451,939	-		EFB2_00426	0.63	-0.1
451,939	-		EFB2_00426	0.63	-0.9
451,939	-		EFB2_00426	0.63	+0.6
451,941	+		EFB2_00426	0.63	+0.4
451,941	+		EFB2_00426	0.63	+0.5
451,942	-		EFB2_00426	0.63	-1.0
451,954	+		EFB2_00426	0.64	-2.6
451,954	+		EFB2_00426	0.64	+0.2
451,954	+		EFB2_00426	0.64	-0.7
451,954	+		EFB2_00426	0.64	+0.4
451,955	-		EFB2_00426	0.64	+0.2
451,955	-		EFB2_00426	0.64	-2.2
451,955	-		EFB2_00426	0.64	+0.5
451,975	+		EFB2_00426	0.65	-1.7
451,975	+		EFB2_00426	0.65	+0.8
451,975	+		EFB2_00426	0.65	+0.3
451,976	-		EFB2_00426	0.65	-1.3
451,976	-		EFB2_00426	0.65	+0.4
451,976	-		EFB2_00426	0.65	+0.1
451,976	-		EFB2_00426	0.65	-0.0
451,976	-		EFB2_00426	0.65	-0.1
451,976	-		EFB2_00426	0.65	+0.7
451,976	-		EFB2_00426	0.65	+0.4
451,984	+		EFB2_00426	0.66	-2.4
451,984	+		EFB2_00426	0.66	+0.7
451,999	+		EFB2_00426	0.67	+1.1
451,999	+		EFB2_00426	0.67	+1.4
451,999	+		EFB2_00426	0.67	-1.4
451,999	+		EFB2_00426	0.67	+0.5
451,999	+		EFB2_00426	0.67	-0.4
452,000	-		EFB2_00426	0.67	+0.3
452,000	-		EFB2_00426	0.67	+2.0
452,000	-		EFB2_00426	0.67	-0.6
452,040	+		EFB2_00426	0.69	-1.5
452,040	+		EFB2_00426	0.69	+1.3
452,040	+		EFB2_00426	0.69	+0.8
452,040	+		EFB2_00426	0.69	+0.1
452,040	+		EFB2_00426	0.69	+0.4
452,040	+		EFB2_00426	0.69	-1.7
452,040	+		EFB2_00426	0.69	+0.3
452,040	+		EFB2_00426	0.69	+0.6
452,040	+		EFB2_00426	0.69	+1.5
452,040	+		EFB2_00426	0.69	-0.7
452,040	+		EFB2_00426	0.69	-2.4
452,040	+		EFB2_00426	0.69	-0.5
452,040	+		EFB2_00426	0.69	-1.2
452,040	+		EFB2_00426	0.69	+0.5
452,040	+		EFB2_00426	0.69	-1.0
452,040	+		EFB2_00426	0.69	-2.8
452,040	+		EFB2_00426	0.69	+0.8
452,040	+		EFB2_00426	0.69	+0.5
452,041	-		EFB2_00426	0.69	+0.9
452,041	-		EFB2_00426	0.69	+1.2
452,041	-		EFB2_00426	0.69	+0.6
452,041	-		EFB2_00426	0.69	-2.8
452,041	-		EFB2_00426	0.69	+1.5
452,041	-		EFB2_00426	0.69	+0.7
452,041	-		EFB2_00426	0.69	-0.7
452,041	-		EFB2_00426	0.69	+0.8
452,041	-		EFB2_00426	0.69	-1.4
452,041	-		EFB2_00426	0.69	-0.5
452,041	-		EFB2_00426	0.69	-1.4
452,041	-		EFB2_00426	0.69	+1.1
452,041	-		EFB2_00426	0.69	-0.2
452,041	-		EFB2_00426	0.69	+0.5
452,041	-		EFB2_00426	0.69	-2.7
452,041	-		EFB2_00426	0.69	+0.2
452,041	-		EFB2_00426	0.69	-3.8
452,041	-		EFB2_00426	0.69	+0.9
452,044	+		EFB2_00426	0.69	-1.6
452,044	+		EFB2_00426	0.69	-0.2
452,044	+		EFB2_00426	0.69	-0.5
452,044	+		EFB2_00426	0.69	-0.5
452,044	+		EFB2_00426	0.69	-2.4
452,044	+		EFB2_00426	0.69	+0.9
452,044	+		EFB2_00426	0.69	+2.0
452,044	+		EFB2_00426	0.69	+1.8
452,044	+		EFB2_00426	0.69	-1.1
452,044	+		EFB2_00426	0.69	-2.7
452,044	+		EFB2_00426	0.69	-0.2
452,044	+		EFB2_00426	0.69	-0.1
452,044	+		EFB2_00426	0.69	-0.4
452,044	+		EFB2_00426	0.69	+0.7
452,044	+		EFB2_00426	0.69	-1.5
452,044	+		EFB2_00426	0.69	+1.2
452,044	+		EFB2_00426	0.69	-2.4
452,044	+		EFB2_00426	0.69	-0.1
452,044	+		EFB2_00426	0.69	+0.0
452,044	+		EFB2_00426	0.69	+0.4
452,044	+		EFB2_00426	0.69	-1.2
452,044	+		EFB2_00426	0.69	+0.2
452,044	+		EFB2_00426	0.69	+2.7
452,044	+		EFB2_00426	0.69	+0.8
452,044	+		EFB2_00426	0.69	-0.6
452,044	+		EFB2_00426	0.69	-0.6
452,044	+		EFB2_00426	0.69	+0.3
452,044	+		EFB2_00426	0.69	-1.6
452,044	+		EFB2_00426	0.69	+0.5
452,044	+		EFB2_00426	0.69	+0.2
452,044	+		EFB2_00426	0.69	-3.1
452,044	+		EFB2_00426	0.69	+0.9
452,044	+		EFB2_00426	0.69	+0.9
452,044	+		EFB2_00426	0.69	+0.3
452,044	+		EFB2_00426	0.69	+1.2
452,044	+		EFB2_00426	0.69	-0.7
452,044	+		EFB2_00426	0.69	+1.0
452,044	+		EFB2_00426	0.69	+0.3
452,045	-		EFB2_00426	0.69	+0.8
452,045	-		EFB2_00426	0.69	+0.3
452,045	-		EFB2_00426	0.69	+0.4
452,045	-		EFB2_00426	0.69	-0.2
452,045	-		EFB2_00426	0.69	-0.2
452,045	-		EFB2_00426	0.69	+1.2
452,045	-		EFB2_00426	0.69	-0.4
452,045	-		EFB2_00426	0.69	+1.2
452,045	-		EFB2_00426	0.69	-0.9
452,045	-		EFB2_00426	0.69	-0.6
452,045	-		EFB2_00426	0.69	-2.4
452,045	-		EFB2_00426	0.69	+0.5
452,045	-		EFB2_00426	0.69	-0.4
452,045	-		EFB2_00426	0.69	-1.4
452,045	-		EFB2_00426	0.69	-1.2
452,045	-		EFB2_00426	0.69	-0.2
452,045	-		EFB2_00426	0.69	+0.4
452,045	-		EFB2_00426	0.69	+0.8
452,045	-		EFB2_00426	0.69	+1.3
452,045	-		EFB2_00426	0.69	-0.4
452,045	-		EFB2_00426	0.69	-2.7
452,045	-		EFB2_00426	0.69	+0.9
452,045	-		EFB2_00426	0.69	+1.1
452,045	-		EFB2_00426	0.69	-1.1
452,045	-		EFB2_00426	0.69	+0.3
452,045	-		EFB2_00426	0.69	-1.4
452,045	-		EFB2_00426	0.69	+0.7
452,045	-		EFB2_00426	0.69	+0.2
452,045	-		EFB2_00426	0.69	-0.0
452,045	-		EFB2_00426	0.69	+1.8
452,045	-		EFB2_00426	0.69	+0.4
452,045	-		EFB2_00426	0.69	+0.5
452,045	-		EFB2_00426	0.69	-0.4
452,045	-		EFB2_00426	0.69	-0.4
452,045	-		EFB2_00426	0.69	+0.6
452,048	+		EFB2_00426	0.69	-0.0
452,048	+		EFB2_00426	0.69	+1.1
452,048	+		EFB2_00426	0.69	-1.7
452,048	+		EFB2_00426	0.69	-0.0
452,048	+		EFB2_00426	0.69	+0.8
452,048	+		EFB2_00426	0.69	-0.3
452,048	+		EFB2_00426	0.69	-0.2
452,048	+		EFB2_00426	0.69	+1.2
452,048	+		EFB2_00426	0.69	+0.4
452,048	+		EFB2_00426	0.69	-0.3
452,048	+		EFB2_00426	0.69	+0.7
452,048	+		EFB2_00426	0.69	+0.9
452,048	+		EFB2_00426	0.69	+2.2
452,048	+		EFB2_00426	0.69	+1.4
452,048	+		EFB2_00426	0.69	-1.2
452,048	+		EFB2_00426	0.69	-1.0
452,048	+		EFB2_00426	0.69	-0.1
452,048	+		EFB2_00426	0.69	+0.3
452,048	+		EFB2_00426	0.69	-1.8
452,048	+		EFB2_00426	0.69	+1.1
452,048	+		EFB2_00426	0.69	+0.2
452,048	+		EFB2_00426	0.69	+1.1
452,049	-		EFB2_00426	0.69	-1.5
452,049	-		EFB2_00426	0.69	-0.3
452,049	-		EFB2_00426	0.69	+0.6
452,049	-		EFB2_00426	0.69	+1.6
452,049	-		EFB2_00426	0.69	-1.2
452,049	-		EFB2_00426	0.69	-0.1
452,049	-		EFB2_00426	0.69	-0.6
452,049	-		EFB2_00426	0.69	+0.6
452,049	-		EFB2_00426	0.69	-0.7
452,049	-		EFB2_00426	0.69	-1.2
452,049	-		EFB2_00426	0.69	-0.1
452,049	-		EFB2_00426	0.69	-0.0
452,049	-		EFB2_00426	0.69	+0.2
452,049	-		EFB2_00426	0.69	+0.3
452,049	-		EFB2_00426	0.69	+0.4
452,049	-		EFB2_00426	0.69	+0.8
452,049	-		EFB2_00426	0.69	+0.1
452,049	-		EFB2_00426	0.69	+0.6
452,049	-		EFB2_00426	0.69	+0.4
452,049	-		EFB2_00426	0.69	-2.0
452,049	-		EFB2_00426	0.69	+0.5
452,049	-		EFB2_00426	0.69	-1.1
452,049	-		EFB2_00426	0.69	+0.1
452,114	+		EFB2_00426	0.73	-0.6
452,114	+		EFB2_00426	0.73	+1.0
452,114	+		EFB2_00426	0.73	+0.4
452,114	+		EFB2_00426	0.73	+1.5
452,114	+		EFB2_00426	0.73	+0.3
452,114	+		EFB2_00426	0.73	-1.5
452,114	+		EFB2_00426	0.73	-4.1
452,115	-		EFB2_00426	0.73	-1.1
452,115	-		EFB2_00426	0.73	+0.6
452,115	-		EFB2_00426	0.73	-2.3
452,115	-		EFB2_00426	0.73	+0.2
452,115	-		EFB2_00426	0.73	+0.2
452,115	-		EFB2_00426	0.73	+1.7
452,115	-		EFB2_00426	0.73	-0.0
452,115	-		EFB2_00426	0.73	-0.1
452,115	-		EFB2_00426	0.73	+0.3
452,115	-		EFB2_00426	0.73	+1.4
452,115	-		EFB2_00426	0.73	-1.5
452,115	-		EFB2_00426	0.73	+0.8
452,115	-		EFB2_00426	0.73	+0.9
452,116	+		EFB2_00426	0.73	-0.0
452,116	+		EFB2_00426	0.73	+1.0
452,116	+		EFB2_00426	0.73	-0.4
452,116	+		EFB2_00426	0.73	-0.4
452,116	+		EFB2_00426	0.73	-0.7
452,117	-		EFB2_00426	0.73	-1.0
452,117	-		EFB2_00426	0.73	+1.4
452,117	-		EFB2_00426	0.73	+1.9
452,117	-		EFB2_00426	0.73	-0.1
452,117	-		EFB2_00426	0.73	-3.7
452,117	-		EFB2_00426	0.73	+2.6
452,117	-		EFB2_00426	0.73	-0.9
452,157	+		EFB2_00426	0.76	+0.1
452,157	+		EFB2_00426	0.76	-0.9
452,157	+		EFB2_00426	0.76	-2.8
452,157	+		EFB2_00426	0.76	+0.9
452,157	+		EFB2_00426	0.76	-1.1
452,158	-		EFB2_00426	0.76	+1.7
452,158	-		EFB2_00426	0.76	-0.6
452,158	-		EFB2_00426	0.76	+1.4
452,158	-		EFB2_00426	0.76	-0.7
452,158	-		EFB2_00426	0.76	+2.0
452,158	-		EFB2_00426	0.76	-0.0
452,158	-		EFB2_00426	0.76	+0.3
452,158	-		EFB2_00426	0.76	+0.2
452,188	-		EFB2_00426	0.78	+0.8
452,188	-		EFB2_00426	0.78	+0.5
452,199	+		EFB2_00426	0.78	+1.0
452,199	+		EFB2_00426	0.78	-0.3
452,200	-		EFB2_00426	0.78	-0.1
452,200	-		EFB2_00426	0.78	+1.4
452,200	-		EFB2_00426	0.78	-1.0
452,200	-		EFB2_00426	0.78	+0.3
452,202	+		EFB2_00426	0.78	+0.4
452,203	-		EFB2_00426	0.78	-1.3
452,210	-		EFB2_00426	0.79	-0.4
452,217	+		EFB2_00426	0.79	-0.4
452,217	+		EFB2_00426	0.79	-3.6
452,217	+		EFB2_00426	0.79	-0.2
452,217	+		EFB2_00426	0.79	-1.8
452,218	-		EFB2_00426	0.79	+0.1
452,218	-		EFB2_00426	0.79	+0.4
452,218	-		EFB2_00426	0.79	+1.3
452,218	-		EFB2_00426	0.79	+1.0
452,218	-		EFB2_00426	0.79	+0.7
452,266	-		EFB2_00426	0.82	-1.4
452,279	+		EFB2_00426	0.83	-1.7
452,279	+		EFB2_00426	0.83	+0.7
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