Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01867

Experiment: Brucella 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01866 and BACOVA_01867 are separated by 7 nucleotidesBACOVA_01867 and BACOVA_01868 are separated by 23 nucleotidesBACOVA_01868 and BACOVA_01869 are separated by 19 nucleotides BACOVA_01866: BACOVA_01866 - hypothetical protein, at 64,385 to 65,953 _01866 BACOVA_01867: BACOVA_01867 - hypothetical protein, at 65,961 to 66,710 _01867 BACOVA_01868: BACOVA_01868 - hypothetical protein, at 66,734 to 67,453 _01868 BACOVA_01869: BACOVA_01869 - hypothetical protein, at 67,473 to 68,705 _01869 Position (kb) 65 66 67Strain fitness (log2 ratio) -2 -1 0 1at 64.967 kb on - strand, within BACOVA_01866at 64.996 kb on - strand, within BACOVA_01866at 65.044 kb on + strand, within BACOVA_01866at 65.056 kb on + strand, within BACOVA_01866at 65.056 kb on + strand, within BACOVA_01866at 65.059 kb on - strand, within BACOVA_01866at 65.080 kb on + strand, within BACOVA_01866at 65.116 kb on - strand, within BACOVA_01866at 65.136 kb on + strand, within BACOVA_01866at 65.161 kb on + strand, within BACOVA_01866at 65.190 kb on - strand, within BACOVA_01866at 65.206 kb on + strand, within BACOVA_01866at 65.207 kb on - strand, within BACOVA_01866at 65.220 kb on - strand, within BACOVA_01866at 65.378 kb on - strand, within BACOVA_01866at 65.419 kb on - strand, within BACOVA_01866at 65.419 kb on - strand, within BACOVA_01866at 65.493 kb on + strand, within BACOVA_01866at 65.494 kb on - strand, within BACOVA_01866at 65.494 kb on - strand, within BACOVA_01866at 65.497 kb on - strand, within BACOVA_01866at 65.564 kb on - strand, within BACOVA_01866at 65.568 kb on + strand, within BACOVA_01866at 65.585 kb on - strand, within BACOVA_01866at 65.591 kb on - strand, within BACOVA_01866at 65.687 kb on - strand, within BACOVA_01866at 65.705 kb on - strand, within BACOVA_01866at 65.705 kb on - strand, within BACOVA_01866at 65.740 kb on - strand, within BACOVA_01866at 65.758 kb on + strand, within BACOVA_01866at 65.793 kb on - strand, within BACOVA_01866at 65.802 kb on + strandat 65.803 kb on - strandat 65.806 kb on + strandat 65.807 kb on - strandat 65.828 kb on - strandat 65.834 kb on + strandat 65.848 kb on + strandat 65.848 kb on + strandat 65.849 kb on - strandat 65.890 kb on + strandat 65.894 kb on - strandat 65.894 kb on - strandat 65.894 kb on - strandat 65.894 kb on - strandat 65.897 kb on - strandat 65.899 kb on + strandat 65.899 kb on + strandat 65.900 kb on - strandat 65.906 kb on + strandat 65.906 kb on + strandat 65.909 kb on + strandat 65.926 kb on + strandat 65.931 kb on + strandat 65.931 kb on + strandat 65.931 kb on + strandat 65.932 kb on - strandat 65.932 kb on - strandat 65.933 kb on + strandat 65.933 kb on + strandat 65.934 kb on - strandat 65.934 kb on - strandat 65.935 kb on + strandat 65.935 kb on + strandat 65.935 kb on + strandat 65.935 kb on + strandat 65.936 kb on - strandat 65.939 kb on - strandat 65.941 kb on - strandat 65.941 kb on - strandat 65.989 kb on + strandat 65.989 kb on + strandat 65.989 kb on + strandat 65.992 kb on + strandat 66.059 kb on + strand, within BACOVA_01867at 66.092 kb on - strand, within BACOVA_01867at 66.103 kb on + strand, within BACOVA_01867at 66.117 kb on + strand, within BACOVA_01867at 66.118 kb on - strand, within BACOVA_01867at 66.186 kb on - strand, within BACOVA_01867at 66.190 kb on - strand, within BACOVA_01867at 66.190 kb on - strand, within BACOVA_01867at 66.214 kb on + strand, within BACOVA_01867at 66.218 kb on + strand, within BACOVA_01867at 66.234 kb on - strand, within BACOVA_01867at 66.236 kb on + strand, within BACOVA_01867at 66.236 kb on + strand, within BACOVA_01867at 66.242 kb on - strand, within BACOVA_01867at 66.259 kb on + strand, within BACOVA_01867at 66.260 kb on - strand, within BACOVA_01867at 66.318 kb on - strand, within BACOVA_01867at 66.337 kb on + strand, within BACOVA_01867at 66.341 kb on - strand, within BACOVA_01867at 66.343 kb on + strand, within BACOVA_01867at 66.358 kb on + strand, within BACOVA_01867at 66.358 kb on + strand, within BACOVA_01867at 66.359 kb on - strand, within BACOVA_01867at 66.377 kb on - strand, within BACOVA_01867at 66.423 kb on + strand, within BACOVA_01867at 66.426 kb on - strand, within BACOVA_01867at 66.492 kb on + strand, within BACOVA_01867at 66.492 kb on + strand, within BACOVA_01867at 66.493 kb on - strand, within BACOVA_01867at 66.503 kb on + strand, within BACOVA_01867at 66.503 kb on - strand, within BACOVA_01867at 66.504 kb on - strand, within BACOVA_01867at 66.506 kb on + strand, within BACOVA_01867at 66.507 kb on - strand, within BACOVA_01867at 66.521 kb on - strand, within BACOVA_01867at 66.526 kb on - strand, within BACOVA_01867at 66.526 kb on - strand, within BACOVA_01867at 66.526 kb on - strand, within BACOVA_01867at 66.526 kb on - strand, within BACOVA_01867at 66.589 kb on + strand, within BACOVA_01867at 66.590 kb on - strand, within BACOVA_01867at 66.590 kb on - strand, within BACOVA_01867at 66.612 kb on + strand, within BACOVA_01867at 66.613 kb on - strand, within BACOVA_01867at 66.638 kb on + strandat 66.683 kb on - strandat 66.728 kb on - strandat 66.731 kb on + strandat 66.732 kb on - strandat 66.732 kb on - strandat 66.732 kb on - strandat 66.760 kb on + strandat 66.761 kb on - strandat 66.761 kb on - strandat 66.763 kb on - strandat 66.763 kb on - strandat 66.767 kb on - strandat 66.796 kb on - strandat 66.831 kb on + strand, within BACOVA_01868at 66.863 kb on + strand, within BACOVA_01868at 66.864 kb on - strand, within BACOVA_01868at 66.864 kb on - strand, within BACOVA_01868at 66.865 kb on + strand, within BACOVA_01868at 66.865 kb on + strand, within BACOVA_01868at 66.866 kb on - strand, within BACOVA_01868at 66.867 kb on + strand, within BACOVA_01868at 66.867 kb on + strand, within BACOVA_01868at 66.867 kb on + strand, within BACOVA_01868at 66.953 kb on - strand, within BACOVA_01868at 66.955 kb on + strand, within BACOVA_01868at 66.984 kb on + strand, within BACOVA_01868at 66.985 kb on - strand, within BACOVA_01868at 66.999 kb on + strand, within BACOVA_01868at 67.000 kb on - strand, within BACOVA_01868at 67.001 kb on + strand, within BACOVA_01868at 67.002 kb on - strand, within BACOVA_01868at 67.043 kb on - strand, within BACOVA_01868at 67.043 kb on - strand, within BACOVA_01868at 67.048 kb on + strand, within BACOVA_01868at 67.138 kb on - strand, within BACOVA_01868at 67.138 kb on - strand, within BACOVA_01868at 67.141 kb on - strand, within BACOVA_01868at 67.182 kb on + strand, within BACOVA_01868at 67.183 kb on - strand, within BACOVA_01868at 67.185 kb on + strand, within BACOVA_01868at 67.185 kb on + strand, within BACOVA_01868at 67.185 kb on + strand, within BACOVA_01868at 67.186 kb on - strand, within BACOVA_01868at 67.186 kb on - strand, within BACOVA_01868at 67.187 kb on + strand, within BACOVA_01868at 67.204 kb on + strand, within BACOVA_01868at 67.207 kb on + strand, within BACOVA_01868at 67.242 kb on - strand, within BACOVA_01868at 67.253 kb on - strand, within BACOVA_01868at 67.296 kb on + strand, within BACOVA_01868at 67.297 kb on - strand, within BACOVA_01868at 67.314 kb on + strand, within BACOVA_01868at 67.318 kb on + strand, within BACOVA_01868at 67.319 kb on - strand, within BACOVA_01868at 67.349 kb on - strand, within BACOVA_01868at 67.410 kb on + strandat 67.411 kb on - strandat 67.491 kb on - strandat 67.505 kb on + strandat 67.511 kb on - strandat 67.511 kb on - strandat 67.538 kb on - strandat 67.538 kb on - strandat 67.565 kb on + strandat 67.569 kb on - strandat 67.631 kb on - strand, within BACOVA_01869at 67.649 kb on + strand, within BACOVA_01869at 67.650 kb on - strand, within BACOVA_01869at 67.650 kb on - strand, within BACOVA_01869at 67.655 kb on + strand, within BACOVA_01869at 67.656 kb on - strand, within BACOVA_01869at 67.656 kb on - strand, within BACOVA_01869at 67.659 kb on + strand, within BACOVA_01869at 67.659 kb on + strand, within BACOVA_01869at 67.659 kb on + strand, within BACOVA_01869at 67.686 kb on + strand, within BACOVA_01869at 67.687 kb on - strand, within BACOVA_01869at 67.687 kb on - strand, within BACOVA_01869at 67.687 kb on - strand, within BACOVA_01869at 67.693 kb on + strand, within BACOVA_01869at 67.694 kb on - strand, within BACOVA_01869

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Per-strain Table

Position Strand Gene LocusTag Fraction Brucella 1 x (C) complex media
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64,967 - BACOVA_01866 0.37 -0.3
64,996 - BACOVA_01866 0.39 +0.5
65,044 + BACOVA_01866 0.42 +0.3
65,056 + BACOVA_01866 0.43 -0.1
65,056 + BACOVA_01866 0.43 -0.0
65,059 - BACOVA_01866 0.43 +0.0
65,080 + BACOVA_01866 0.44 -0.2
65,116 - BACOVA_01866 0.47 -0.5
65,136 + BACOVA_01866 0.48 +0.4
65,161 + BACOVA_01866 0.49 +0.2
65,190 - BACOVA_01866 0.51 +0.0
65,206 + BACOVA_01866 0.52 -0.9
65,207 - BACOVA_01866 0.52 -1.4
65,220 - BACOVA_01866 0.53 +0.5
65,378 - BACOVA_01866 0.63 +0.4
65,419 - BACOVA_01866 0.66 +0.0
65,419 - BACOVA_01866 0.66 +0.3
65,493 + BACOVA_01866 0.71 +0.6
65,494 - BACOVA_01866 0.71 -0.2
65,494 - BACOVA_01866 0.71 +0.1
65,497 - BACOVA_01866 0.71 +0.4
65,564 - BACOVA_01866 0.75 +0.7
65,568 + BACOVA_01866 0.75 +1.3
65,585 - BACOVA_01866 0.76 +0.9
65,591 - BACOVA_01866 0.77 -0.4
65,687 - BACOVA_01866 0.83 +0.3
65,705 - BACOVA_01866 0.84 +0.0
65,705 - BACOVA_01866 0.84 -0.0
65,740 - BACOVA_01866 0.86 +0.3
65,758 + BACOVA_01866 0.88 -0.5
65,793 - BACOVA_01866 0.90 -1.0
65,802 + +1.0
65,803 - +0.2
65,806 + -0.0
65,807 - -0.4
65,828 - -0.4
65,834 + -0.6
65,848 + +0.9
65,848 + +0.8
65,849 - +0.2
65,890 + -1.2
65,894 - +1.1
65,894 - +1.1
65,894 - +0.2
65,894 - -0.4
65,897 - +0.2
65,899 + +0.2
65,899 + -0.1
65,900 - -0.0
65,906 + +0.2
65,906 + +0.2
65,909 + +1.2
65,926 + -0.2
65,931 + -0.2
65,931 + +0.7
65,931 + +0.6
65,932 - -0.5
65,932 - +0.0
65,933 + -0.5
65,933 + -0.9
65,934 - +0.7
65,934 - +0.9
65,935 + -1.3
65,935 + +0.5
65,935 + +0.7
65,935 + -1.1
65,936 - -0.7
65,939 - +1.3
65,941 - -0.7
65,941 - -0.1
65,989 + -0.2
65,989 + -0.8
65,989 + +0.0
65,992 + -0.1
66,059 + BACOVA_01867 0.13 +0.3
66,092 - BACOVA_01867 0.17 +0.1
66,103 + BACOVA_01867 0.19 -1.3
66,117 + BACOVA_01867 0.21 -1.9
66,118 - BACOVA_01867 0.21 -0.4
66,186 - BACOVA_01867 0.30 +0.5
66,190 - BACOVA_01867 0.31 -0.3
66,190 - BACOVA_01867 0.31 +0.1
66,214 + BACOVA_01867 0.34 -0.6
66,218 + BACOVA_01867 0.34 +0.3
66,234 - BACOVA_01867 0.36 -1.0
66,236 + BACOVA_01867 0.37 -0.7
66,236 + BACOVA_01867 0.37 +0.8
66,242 - BACOVA_01867 0.37 +0.7
66,259 + BACOVA_01867 0.40 -0.5
66,260 - BACOVA_01867 0.40 -0.1
66,318 - BACOVA_01867 0.48 -0.4
66,337 + BACOVA_01867 0.50 +0.3
66,341 - BACOVA_01867 0.51 +0.5
66,343 + BACOVA_01867 0.51 +0.4
66,358 + BACOVA_01867 0.53 +0.8
66,358 + BACOVA_01867 0.53 +0.5
66,359 - BACOVA_01867 0.53 +0.9
66,377 - BACOVA_01867 0.55 +1.1
66,423 + BACOVA_01867 0.62 -0.1
66,426 - BACOVA_01867 0.62 -0.9
66,492 + BACOVA_01867 0.71 -0.4
66,492 + BACOVA_01867 0.71 -0.6
66,493 - BACOVA_01867 0.71 +0.4
66,503 + BACOVA_01867 0.72 +0.9
66,503 - BACOVA_01867 0.72 +0.5
66,504 - BACOVA_01867 0.72 +0.3
66,506 + BACOVA_01867 0.73 +0.3
66,507 - BACOVA_01867 0.73 -2.3
66,521 - BACOVA_01867 0.75 +0.4
66,526 - BACOVA_01867 0.75 +1.1
66,526 - BACOVA_01867 0.75 +0.6
66,526 - BACOVA_01867 0.75 -1.0
66,526 - BACOVA_01867 0.75 -0.9
66,589 + BACOVA_01867 0.84 -1.3
66,590 - BACOVA_01867 0.84 +0.5
66,590 - BACOVA_01867 0.84 +0.9
66,612 + BACOVA_01867 0.87 -0.4
66,613 - BACOVA_01867 0.87 -0.1
66,638 + +0.1
66,683 - +0.0
66,728 - -0.4
66,731 + -0.1
66,732 - -0.9
66,732 - -0.7
66,732 - -0.1
66,760 + -0.2
66,761 - +0.1
66,761 - +0.3
66,763 - -0.7
66,763 - -0.1
66,767 - -0.9
66,796 - +0.1
66,831 + BACOVA_01868 0.13 -0.5
66,863 + BACOVA_01868 0.18 -1.5
66,864 - BACOVA_01868 0.18 +0.7
66,864 - BACOVA_01868 0.18 -0.7
66,865 + BACOVA_01868 0.18 +0.3
66,865 + BACOVA_01868 0.18 +0.3
66,866 - BACOVA_01868 0.18 +0.7
66,867 + BACOVA_01868 0.18 +0.7
66,867 + BACOVA_01868 0.18 -0.1
66,867 + BACOVA_01868 0.18 +0.6
66,953 - BACOVA_01868 0.30 -0.3
66,955 + BACOVA_01868 0.31 +0.8
66,984 + BACOVA_01868 0.35 +0.3
66,985 - BACOVA_01868 0.35 +0.2
66,999 + BACOVA_01868 0.37 -1.3
67,000 - BACOVA_01868 0.37 -0.4
67,001 + BACOVA_01868 0.37 +1.1
67,002 - BACOVA_01868 0.37 +0.6
67,043 - BACOVA_01868 0.43 +0.7
67,043 - BACOVA_01868 0.43 +0.9
67,048 + BACOVA_01868 0.44 -0.6
67,138 - BACOVA_01868 0.56 +1.3
67,138 - BACOVA_01868 0.56 +0.7
67,141 - BACOVA_01868 0.57 +0.7
67,182 + BACOVA_01868 0.62 -1.3
67,183 - BACOVA_01868 0.62 -0.1
67,185 + BACOVA_01868 0.63 -1.0
67,185 + BACOVA_01868 0.63 +0.6
67,185 + BACOVA_01868 0.63 +1.3
67,186 - BACOVA_01868 0.63 -0.0
67,186 - BACOVA_01868 0.63 -0.1
67,187 + BACOVA_01868 0.63 +0.0
67,204 + BACOVA_01868 0.65 -0.7
67,207 + BACOVA_01868 0.66 -0.1
67,242 - BACOVA_01868 0.71 +0.4
67,253 - BACOVA_01868 0.72 -0.0
67,296 + BACOVA_01868 0.78 +0.8
67,297 - BACOVA_01868 0.78 -0.2
67,314 + BACOVA_01868 0.81 +0.9
67,318 + BACOVA_01868 0.81 -0.1
67,319 - BACOVA_01868 0.81 -1.1
67,349 - BACOVA_01868 0.85 +1.5
67,410 + -0.8
67,411 - -0.6
67,491 - -0.8
67,505 + +0.4
67,511 - +0.2
67,511 - -0.7
67,538 - +0.7
67,538 - +1.2
67,565 + -1.6
67,569 - -0.5
67,631 - BACOVA_01869 0.13 +0.7
67,649 + BACOVA_01869 0.14 -0.5
67,650 - BACOVA_01869 0.14 -0.9
67,650 - BACOVA_01869 0.14 +0.9
67,655 + BACOVA_01869 0.15 +0.9
67,656 - BACOVA_01869 0.15 -0.1
67,656 - BACOVA_01869 0.15 -2.3
67,659 + BACOVA_01869 0.15 +0.3
67,659 + BACOVA_01869 0.15 -0.7
67,659 + BACOVA_01869 0.15 +0.2
67,686 + BACOVA_01869 0.17 -0.2
67,687 - BACOVA_01869 0.17 -1.5
67,687 - BACOVA_01869 0.17 +0.1
67,687 - BACOVA_01869 0.17 +1.1
67,693 + BACOVA_01869 0.18 -1.3
67,694 - BACOVA_01869 0.18 +0.3

Or see this region's nucleotide sequence