Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01765

Experiment: Brucella 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01762 and BACOVA_01763 are separated by 28 nucleotidesBACOVA_01763 and BACOVA_01764 overlap by 29 nucleotidesBACOVA_01764 and BACOVA_01765 are separated by 163 nucleotidesBACOVA_01765 and BACOVA_01766 are separated by 11 nucleotides BACOVA_01762: BACOVA_01762 - hypothetical protein, at 184,095 to 184,865 _01762 BACOVA_01763: BACOVA_01763 - hypothetical protein, at 184,894 to 185,475 _01763 BACOVA_01764: BACOVA_01764 - hypothetical protein, at 185,447 to 185,563 _01764 BACOVA_01765: BACOVA_01765 - hypothetical protein, at 185,727 to 186,551 _01765 BACOVA_01766: BACOVA_01766 - hypothetical protein, at 186,563 to 188,116 _01766 Position (kb) 185 186 187Strain fitness (log2 ratio) -3 -2 -1 0 1at 184.818 kb on - strandat 184.822 kb on - strandat 184.822 kb on - strandat 184.839 kb on - strandat 184.846 kb on - strandat 184.911 kb on - strandat 184.935 kb on - strandat 184.938 kb on - strandat 184.975 kb on - strand, within BACOVA_01763at 184.980 kb on + strand, within BACOVA_01763at 184.997 kb on + strand, within BACOVA_01763at 185.012 kb on + strand, within BACOVA_01763at 185.025 kb on - strand, within BACOVA_01763at 185.041 kb on - strand, within BACOVA_01763at 185.041 kb on - strand, within BACOVA_01763at 185.061 kb on + strand, within BACOVA_01763at 185.129 kb on + strand, within BACOVA_01763at 185.129 kb on + strand, within BACOVA_01763at 185.160 kb on + strand, within BACOVA_01763at 185.160 kb on + strand, within BACOVA_01763at 185.161 kb on - strand, within BACOVA_01763at 185.161 kb on - strand, within BACOVA_01763at 185.163 kb on + strand, within BACOVA_01763at 185.163 kb on + strand, within BACOVA_01763at 185.236 kb on + strand, within BACOVA_01763at 185.239 kb on - strand, within BACOVA_01763at 185.247 kb on - strand, within BACOVA_01763at 185.319 kb on + strand, within BACOVA_01763at 185.319 kb on + strand, within BACOVA_01763at 185.323 kb on - strand, within BACOVA_01763at 185.323 kb on - strand, within BACOVA_01763at 185.331 kb on + strand, within BACOVA_01763at 185.331 kb on + strand, within BACOVA_01763at 185.350 kb on + strand, within BACOVA_01763at 185.468 kb on + strandat 185.469 kb on - strandat 185.469 kb on - strandat 185.470 kb on + strandat 185.487 kb on + strand, within BACOVA_01764at 185.490 kb on + strand, within BACOVA_01764at 185.491 kb on - strand, within BACOVA_01764at 185.492 kb on + strand, within BACOVA_01764at 185.493 kb on - strand, within BACOVA_01764at 185.494 kb on + strand, within BACOVA_01764at 185.525 kb on - strand, within BACOVA_01764at 185.618 kb on - strandat 185.657 kb on + strandat 185.695 kb on + strandat 185.704 kb on + strandat 185.712 kb on + strandat 185.712 kb on + strandat 185.712 kb on + strandat 185.712 kb on + strandat 185.740 kb on - strandat 185.740 kb on - strandat 185.743 kb on + strandat 185.744 kb on - strandat 185.744 kb on - strandat 185.744 kb on - strandat 185.824 kb on + strand, within BACOVA_01765at 185.856 kb on - strand, within BACOVA_01765at 185.858 kb on - strand, within BACOVA_01765at 185.904 kb on - strand, within BACOVA_01765at 185.941 kb on + strand, within BACOVA_01765at 185.942 kb on - strand, within BACOVA_01765at 185.942 kb on - strand, within BACOVA_01765at 185.969 kb on + strand, within BACOVA_01765at 185.970 kb on - strand, within BACOVA_01765at 185.974 kb on + strand, within BACOVA_01765at 185.975 kb on - strand, within BACOVA_01765at 185.984 kb on - strand, within BACOVA_01765at 186.038 kb on - strand, within BACOVA_01765at 186.042 kb on - strand, within BACOVA_01765at 186.042 kb on - strand, within BACOVA_01765at 186.080 kb on + strand, within BACOVA_01765at 186.084 kb on + strand, within BACOVA_01765at 186.084 kb on + strand, within BACOVA_01765at 186.084 kb on + strand, within BACOVA_01765at 186.085 kb on - strand, within BACOVA_01765at 186.109 kb on - strand, within BACOVA_01765at 186.137 kb on + strand, within BACOVA_01765at 186.138 kb on - strand, within BACOVA_01765at 186.287 kb on + strand, within BACOVA_01765at 186.371 kb on + strand, within BACOVA_01765at 186.371 kb on + strand, within BACOVA_01765at 186.372 kb on - strand, within BACOVA_01765at 186.383 kb on - strand, within BACOVA_01765at 186.385 kb on - strand, within BACOVA_01765at 186.460 kb on + strand, within BACOVA_01765at 186.492 kb on + strandat 186.495 kb on - strandat 186.495 kb on - strandat 186.550 kb on - strandat 186.554 kb on - strandat 186.561 kb on - strandat 186.580 kb on - strandat 186.580 kb on - strandat 186.584 kb on + strandat 186.586 kb on - strandat 186.588 kb on + strandat 186.588 kb on + strandat 186.629 kb on - strandat 186.629 kb on - strandat 186.649 kb on - strandat 186.721 kb on + strand, within BACOVA_01766at 186.769 kb on + strand, within BACOVA_01766at 186.803 kb on - strand, within BACOVA_01766at 186.834 kb on + strand, within BACOVA_01766at 186.834 kb on + strand, within BACOVA_01766at 186.835 kb on - strand, within BACOVA_01766at 186.838 kb on + strand, within BACOVA_01766at 186.839 kb on - strand, within BACOVA_01766at 186.854 kb on - strand, within BACOVA_01766at 186.854 kb on - strand, within BACOVA_01766at 186.892 kb on + strand, within BACOVA_01766at 186.892 kb on + strand, within BACOVA_01766at 186.895 kb on + strand, within BACOVA_01766at 186.986 kb on + strand, within BACOVA_01766at 187.006 kb on + strand, within BACOVA_01766at 187.006 kb on + strand, within BACOVA_01766at 187.006 kb on + strand, within BACOVA_01766at 187.007 kb on - strand, within BACOVA_01766at 187.012 kb on + strand, within BACOVA_01766at 187.012 kb on + strand, within BACOVA_01766at 187.056 kb on + strand, within BACOVA_01766at 187.057 kb on - strand, within BACOVA_01766at 187.057 kb on - strand, within BACOVA_01766at 187.090 kb on - strand, within BACOVA_01766at 187.136 kb on + strand, within BACOVA_01766at 187.271 kb on - strand, within BACOVA_01766at 187.337 kb on - strand, within BACOVA_01766

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Per-strain Table

Position Strand Gene LocusTag Fraction Brucella 1 x (C) complex media
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184,818 - -1.3
184,822 - -1.4
184,822 - -0.1
184,839 - +1.0
184,846 - -1.0
184,911 - -0.3
184,935 - -0.4
184,938 - +1.0
184,975 - BACOVA_01763 0.14 +0.3
184,980 + BACOVA_01763 0.15 -1.5
184,997 + BACOVA_01763 0.18 -0.9
185,012 + BACOVA_01763 0.20 +0.6
185,025 - BACOVA_01763 0.23 -1.9
185,041 - BACOVA_01763 0.25 +1.3
185,041 - BACOVA_01763 0.25 -1.2
185,061 + BACOVA_01763 0.29 +0.2
185,129 + BACOVA_01763 0.40 -1.7
185,129 + BACOVA_01763 0.40 +0.3
185,160 + BACOVA_01763 0.46 -0.9
185,160 + BACOVA_01763 0.46 -0.4
185,161 - BACOVA_01763 0.46 +0.4
185,161 - BACOVA_01763 0.46 -0.2
185,163 + BACOVA_01763 0.46 -1.5
185,163 + BACOVA_01763 0.46 +0.2
185,236 + BACOVA_01763 0.59 -0.9
185,239 - BACOVA_01763 0.59 -0.9
185,247 - BACOVA_01763 0.61 +0.5
185,319 + BACOVA_01763 0.73 -1.5
185,319 + BACOVA_01763 0.73 -0.4
185,323 - BACOVA_01763 0.74 -0.2
185,323 - BACOVA_01763 0.74 +0.4
185,331 + BACOVA_01763 0.75 -1.9
185,331 + BACOVA_01763 0.75 -0.7
185,350 + BACOVA_01763 0.78 -0.5
185,468 + -2.1
185,469 - +1.2
185,469 - +0.2
185,470 + -0.6
185,487 + BACOVA_01764 0.34 +0.1
185,490 + BACOVA_01764 0.37 +0.0
185,491 - BACOVA_01764 0.38 +0.0
185,492 + BACOVA_01764 0.38 -0.2
185,493 - BACOVA_01764 0.39 -1.0
185,494 + BACOVA_01764 0.40 -3.0
185,525 - BACOVA_01764 0.67 -0.6
185,618 - +1.0
185,657 + +0.2
185,695 + -1.3
185,704 + +1.2
185,712 + +0.2
185,712 + +0.6
185,712 + -2.1
185,712 + -0.6
185,740 - +0.0
185,740 - -0.4
185,743 + +0.6
185,744 - -0.6
185,744 - +0.7
185,744 - +0.1
185,824 + BACOVA_01765 0.12 -0.8
185,856 - BACOVA_01765 0.16 +1.1
185,858 - BACOVA_01765 0.16 +0.0
185,904 - BACOVA_01765 0.21 +0.0
185,941 + BACOVA_01765 0.26 -0.4
185,942 - BACOVA_01765 0.26 -0.6
185,942 - BACOVA_01765 0.26 -0.6
185,969 + BACOVA_01765 0.29 +0.0
185,970 - BACOVA_01765 0.29 -0.9
185,974 + BACOVA_01765 0.30 -0.1
185,975 - BACOVA_01765 0.30 -0.8
185,984 - BACOVA_01765 0.31 +0.8
186,038 - BACOVA_01765 0.38 +0.4
186,042 - BACOVA_01765 0.38 +0.6
186,042 - BACOVA_01765 0.38 +0.9
186,080 + BACOVA_01765 0.43 -0.2
186,084 + BACOVA_01765 0.43 -0.1
186,084 + BACOVA_01765 0.43 -1.1
186,084 + BACOVA_01765 0.43 -0.4
186,085 - BACOVA_01765 0.43 -1.4
186,109 - BACOVA_01765 0.46 -0.0
186,137 + BACOVA_01765 0.50 +1.0
186,138 - BACOVA_01765 0.50 +1.4
186,287 + BACOVA_01765 0.68 -1.3
186,371 + BACOVA_01765 0.78 -0.8
186,371 + BACOVA_01765 0.78 -1.0
186,372 - BACOVA_01765 0.78 +0.0
186,383 - BACOVA_01765 0.80 +0.5
186,385 - BACOVA_01765 0.80 -0.1
186,460 + BACOVA_01765 0.89 -1.2
186,492 + -0.9
186,495 - -0.1
186,495 - -1.0
186,550 - -0.3
186,554 - -0.7
186,561 - -0.7
186,580 - +0.2
186,580 - +0.0
186,584 + -0.1
186,586 - -0.2
186,588 + -0.3
186,588 + +0.4
186,629 - -0.1
186,629 - +0.2
186,649 - +0.4
186,721 + BACOVA_01766 0.10 +0.1
186,769 + BACOVA_01766 0.13 -1.9
186,803 - BACOVA_01766 0.15 -0.6
186,834 + BACOVA_01766 0.17 +0.1
186,834 + BACOVA_01766 0.17 +0.4
186,835 - BACOVA_01766 0.18 -0.1
186,838 + BACOVA_01766 0.18 +1.1
186,839 - BACOVA_01766 0.18 -1.1
186,854 - BACOVA_01766 0.19 +0.9
186,854 - BACOVA_01766 0.19 +0.9
186,892 + BACOVA_01766 0.21 -0.7
186,892 + BACOVA_01766 0.21 -1.4
186,895 + BACOVA_01766 0.21 +0.7
186,986 + BACOVA_01766 0.27 -1.4
187,006 + BACOVA_01766 0.29 -0.8
187,006 + BACOVA_01766 0.29 -0.1
187,006 + BACOVA_01766 0.29 -0.1
187,007 - BACOVA_01766 0.29 +0.4
187,012 + BACOVA_01766 0.29 -1.2
187,012 + BACOVA_01766 0.29 -0.6
187,056 + BACOVA_01766 0.32 -2.0
187,057 - BACOVA_01766 0.32 -0.2
187,057 - BACOVA_01766 0.32 -0.4
187,090 - BACOVA_01766 0.34 -0.2
187,136 + BACOVA_01766 0.37 +1.4
187,271 - BACOVA_01766 0.46 +0.8
187,337 - BACOVA_01766 0.50 -0.6

Or see this region's nucleotide sequence