Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01665

Experiment: BHI 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01664 and BACOVA_01665 are separated by 15 nucleotidesBACOVA_01665 and BACOVA_01666 are separated by 19 nucleotides BACOVA_01664: BACOVA_01664 - hypothetical protein, at 72,854 to 74,278 _01664 BACOVA_01665: BACOVA_01665 - IPT/TIG domain protein, at 74,294 to 75,808 _01665 BACOVA_01666: BACOVA_01666 - SusD family protein, at 75,828 to 77,309 _01666 Position (kb) 74 75 76Strain fitness (log2 ratio) -2 -1 0 1 2at 73.371 kb on + strand, within BACOVA_01664at 73.371 kb on + strand, within BACOVA_01664at 73.382 kb on - strand, within BACOVA_01664at 73.400 kb on + strand, within BACOVA_01664at 73.454 kb on + strand, within BACOVA_01664at 73.458 kb on - strand, within BACOVA_01664at 73.458 kb on - strand, within BACOVA_01664at 73.574 kb on - strand, within BACOVA_01664at 73.646 kb on - strand, within BACOVA_01664at 73.646 kb on - strand, within BACOVA_01664at 73.685 kb on + strand, within BACOVA_01664at 73.697 kb on - strand, within BACOVA_01664at 73.707 kb on + strand, within BACOVA_01664at 73.712 kb on - strand, within BACOVA_01664at 73.775 kb on - strand, within BACOVA_01664at 73.831 kb on + strand, within BACOVA_01664at 73.834 kb on + strand, within BACOVA_01664at 73.847 kb on - strand, within BACOVA_01664at 73.847 kb on - strand, within BACOVA_01664at 73.847 kb on - strand, within BACOVA_01664at 73.870 kb on + strand, within BACOVA_01664at 73.871 kb on - strand, within BACOVA_01664at 73.892 kb on + strand, within BACOVA_01664at 73.892 kb on + strand, within BACOVA_01664at 73.892 kb on + strand, within BACOVA_01664at 73.893 kb on - strand, within BACOVA_01664at 73.962 kb on + strand, within BACOVA_01664at 73.982 kb on - strand, within BACOVA_01664at 74.122 kb on + strand, within BACOVA_01664at 74.123 kb on - strand, within BACOVA_01664at 74.156 kb on - strandat 74.215 kb on - strandat 74.225 kb on + strandat 74.225 kb on + strandat 74.307 kb on + strandat 74.369 kb on + strandat 74.387 kb on - strandat 74.387 kb on - strandat 74.449 kb on - strand, within BACOVA_01665at 74.449 kb on - strand, within BACOVA_01665at 74.451 kb on - strand, within BACOVA_01665at 74.451 kb on - strand, within BACOVA_01665at 74.453 kb on - strand, within BACOVA_01665at 74.453 kb on - strand, within BACOVA_01665at 74.524 kb on + strand, within BACOVA_01665at 74.525 kb on - strand, within BACOVA_01665at 74.591 kb on - strand, within BACOVA_01665at 74.634 kb on - strand, within BACOVA_01665at 74.653 kb on + strand, within BACOVA_01665at 74.659 kb on + strand, within BACOVA_01665at 74.695 kb on + strand, within BACOVA_01665at 74.731 kb on + strand, within BACOVA_01665at 74.794 kb on + strand, within BACOVA_01665at 74.875 kb on + strand, within BACOVA_01665at 74.876 kb on - strand, within BACOVA_01665at 74.890 kb on + strand, within BACOVA_01665at 74.956 kb on + strand, within BACOVA_01665at 74.957 kb on - strand, within BACOVA_01665at 74.960 kb on + strand, within BACOVA_01665at 74.960 kb on + strand, within BACOVA_01665at 74.964 kb on + strand, within BACOVA_01665at 74.964 kb on + strand, within BACOVA_01665at 75.004 kb on - strand, within BACOVA_01665at 75.004 kb on - strand, within BACOVA_01665at 75.004 kb on - strand, within BACOVA_01665at 75.028 kb on + strand, within BACOVA_01665at 75.028 kb on + strand, within BACOVA_01665at 75.029 kb on - strand, within BACOVA_01665at 75.029 kb on - strand, within BACOVA_01665at 75.029 kb on - strand, within BACOVA_01665at 75.060 kb on - strand, within BACOVA_01665at 75.157 kb on + strand, within BACOVA_01665at 75.158 kb on - strand, within BACOVA_01665at 75.262 kb on + strand, within BACOVA_01665at 75.273 kb on + strand, within BACOVA_01665at 75.286 kb on + strand, within BACOVA_01665at 75.286 kb on + strand, within BACOVA_01665at 75.410 kb on + strand, within BACOVA_01665at 75.481 kb on + strand, within BACOVA_01665at 75.481 kb on + strand, within BACOVA_01665at 75.520 kb on + strand, within BACOVA_01665at 75.562 kb on + strand, within BACOVA_01665at 75.562 kb on + strand, within BACOVA_01665at 75.586 kb on + strand, within BACOVA_01665at 75.587 kb on - strand, within BACOVA_01665at 75.587 kb on - strand, within BACOVA_01665at 75.630 kb on - strand, within BACOVA_01665at 75.785 kb on + strandat 75.785 kb on + strandat 75.826 kb on + strandat 75.832 kb on + strandat 75.833 kb on - strandat 75.943 kb on + strandat 75.988 kb on - strand, within BACOVA_01666at 76.066 kb on + strand, within BACOVA_01666at 76.067 kb on - strand, within BACOVA_01666at 76.067 kb on - strand, within BACOVA_01666at 76.116 kb on + strand, within BACOVA_01666at 76.195 kb on + strand, within BACOVA_01666at 76.206 kb on + strand, within BACOVA_01666at 76.206 kb on + strand, within BACOVA_01666at 76.206 kb on + strand, within BACOVA_01666at 76.255 kb on - strand, within BACOVA_01666at 76.282 kb on - strand, within BACOVA_01666at 76.285 kb on + strand, within BACOVA_01666at 76.285 kb on + strand, within BACOVA_01666at 76.316 kb on + strand, within BACOVA_01666at 76.316 kb on + strand, within BACOVA_01666at 76.324 kb on + strand, within BACOVA_01666at 76.325 kb on - strand, within BACOVA_01666at 76.425 kb on + strand, within BACOVA_01666at 76.497 kb on - strand, within BACOVA_01666at 76.499 kb on - strand, within BACOVA_01666at 76.504 kb on - strand, within BACOVA_01666at 76.515 kb on - strand, within BACOVA_01666at 76.517 kb on + strand, within BACOVA_01666at 76.541 kb on + strand, within BACOVA_01666at 76.558 kb on + strand, within BACOVA_01666at 76.593 kb on + strand, within BACOVA_01666at 76.643 kb on - strand, within BACOVA_01666at 76.675 kb on - strand, within BACOVA_01666at 76.705 kb on + strand, within BACOVA_01666at 76.705 kb on + strand, within BACOVA_01666at 76.705 kb on + strand, within BACOVA_01666at 76.706 kb on - strand, within BACOVA_01666

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Per-strain Table

Position Strand Gene LocusTag Fraction BHI 1 x (C) complex media
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73,371 + BACOVA_01664 0.36 -0.4
73,371 + BACOVA_01664 0.36 +0.0
73,382 - BACOVA_01664 0.37 -0.3
73,400 + BACOVA_01664 0.38 +0.2
73,454 + BACOVA_01664 0.42 +0.3
73,458 - BACOVA_01664 0.42 +0.6
73,458 - BACOVA_01664 0.42 +1.2
73,574 - BACOVA_01664 0.51 +1.3
73,646 - BACOVA_01664 0.56 -0.4
73,646 - BACOVA_01664 0.56 +0.1
73,685 + BACOVA_01664 0.58 +0.1
73,697 - BACOVA_01664 0.59 +0.4
73,707 + BACOVA_01664 0.60 +2.1
73,712 - BACOVA_01664 0.60 +0.1
73,775 - BACOVA_01664 0.65 +0.5
73,831 + BACOVA_01664 0.69 +0.2
73,834 + BACOVA_01664 0.69 +1.2
73,847 - BACOVA_01664 0.70 +0.2
73,847 - BACOVA_01664 0.70 -0.3
73,847 - BACOVA_01664 0.70 +0.5
73,870 + BACOVA_01664 0.71 +1.2
73,871 - BACOVA_01664 0.71 -0.4
73,892 + BACOVA_01664 0.73 -1.1
73,892 + BACOVA_01664 0.73 -0.7
73,892 + BACOVA_01664 0.73 -0.9
73,893 - BACOVA_01664 0.73 +0.2
73,962 + BACOVA_01664 0.78 -0.3
73,982 - BACOVA_01664 0.79 -0.1
74,122 + BACOVA_01664 0.89 +1.0
74,123 - BACOVA_01664 0.89 +1.0
74,156 - +0.1
74,215 - +0.8
74,225 + +0.1
74,225 + +0.7
74,307 + -0.6
74,369 + -0.4
74,387 - +0.2
74,387 - -1.9
74,449 - BACOVA_01665 0.10 +0.8
74,449 - BACOVA_01665 0.10 -0.0
74,451 - BACOVA_01665 0.10 +0.3
74,451 - BACOVA_01665 0.10 +0.8
74,453 - BACOVA_01665 0.10 -1.7
74,453 - BACOVA_01665 0.10 -0.3
74,524 + BACOVA_01665 0.15 +0.2
74,525 - BACOVA_01665 0.15 -0.3
74,591 - BACOVA_01665 0.20 +0.2
74,634 - BACOVA_01665 0.22 -0.0
74,653 + BACOVA_01665 0.24 -0.4
74,659 + BACOVA_01665 0.24 -0.2
74,695 + BACOVA_01665 0.26 +0.5
74,731 + BACOVA_01665 0.29 -1.4
74,794 + BACOVA_01665 0.33 -0.4
74,875 + BACOVA_01665 0.38 +0.5
74,876 - BACOVA_01665 0.38 -0.0
74,890 + BACOVA_01665 0.39 +0.2
74,956 + BACOVA_01665 0.44 -0.2
74,957 - BACOVA_01665 0.44 -1.8
74,960 + BACOVA_01665 0.44 +1.1
74,960 + BACOVA_01665 0.44 -0.2
74,964 + BACOVA_01665 0.44 +1.0
74,964 + BACOVA_01665 0.44 +0.2
75,004 - BACOVA_01665 0.47 -0.5
75,004 - BACOVA_01665 0.47 -0.8
75,004 - BACOVA_01665 0.47 -1.0
75,028 + BACOVA_01665 0.48 -0.2
75,028 + BACOVA_01665 0.48 -1.1
75,029 - BACOVA_01665 0.49 +0.4
75,029 - BACOVA_01665 0.49 -0.9
75,029 - BACOVA_01665 0.49 +0.1
75,060 - BACOVA_01665 0.51 -1.0
75,157 + BACOVA_01665 0.57 +1.6
75,158 - BACOVA_01665 0.57 -0.4
75,262 + BACOVA_01665 0.64 +0.0
75,273 + BACOVA_01665 0.65 +0.1
75,286 + BACOVA_01665 0.65 +0.1
75,286 + BACOVA_01665 0.65 +0.2
75,410 + BACOVA_01665 0.74 -0.2
75,481 + BACOVA_01665 0.78 -1.0
75,481 + BACOVA_01665 0.78 -0.7
75,520 + BACOVA_01665 0.81 +0.3
75,562 + BACOVA_01665 0.84 -0.9
75,562 + BACOVA_01665 0.84 -1.1
75,586 + BACOVA_01665 0.85 -0.2
75,587 - BACOVA_01665 0.85 -0.9
75,587 - BACOVA_01665 0.85 -1.3
75,630 - BACOVA_01665 0.88 +0.9
75,785 + -0.2
75,785 + +0.8
75,826 + -0.8
75,832 + -0.4
75,833 - -2.0
75,943 + +0.6
75,988 - BACOVA_01666 0.11 +0.1
76,066 + BACOVA_01666 0.16 -0.2
76,067 - BACOVA_01666 0.16 +0.5
76,067 - BACOVA_01666 0.16 -0.2
76,116 + BACOVA_01666 0.19 -0.1
76,195 + BACOVA_01666 0.25 -1.4
76,206 + BACOVA_01666 0.26 -0.9
76,206 + BACOVA_01666 0.26 -0.5
76,206 + BACOVA_01666 0.26 +0.2
76,255 - BACOVA_01666 0.29 +0.1
76,282 - BACOVA_01666 0.31 +0.1
76,285 + BACOVA_01666 0.31 +0.8
76,285 + BACOVA_01666 0.31 -0.9
76,316 + BACOVA_01666 0.33 +0.1
76,316 + BACOVA_01666 0.33 -0.4
76,324 + BACOVA_01666 0.33 +0.2
76,325 - BACOVA_01666 0.34 -1.2
76,425 + BACOVA_01666 0.40 -0.7
76,497 - BACOVA_01666 0.45 -0.9
76,499 - BACOVA_01666 0.45 -0.9
76,504 - BACOVA_01666 0.46 -1.3
76,515 - BACOVA_01666 0.46 -0.7
76,517 + BACOVA_01666 0.46 -0.5
76,541 + BACOVA_01666 0.48 +0.5
76,558 + BACOVA_01666 0.49 -2.4
76,593 + BACOVA_01666 0.52 +1.1
76,643 - BACOVA_01666 0.55 -1.4
76,675 - BACOVA_01666 0.57 -2.3
76,705 + BACOVA_01666 0.59 -0.9
76,705 + BACOVA_01666 0.59 +0.2
76,705 + BACOVA_01666 0.59 +0.6
76,706 - BACOVA_01666 0.59 +1.0

Or see this region's nucleotide sequence