Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03914

Experiment: ABB 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03912 and BACOVA_03913 overlap by 8 nucleotidesBACOVA_03913 and BACOVA_03914 overlap by 13 nucleotidesBACOVA_03914 and BACOVA_03915 are separated by 18 nucleotidesBACOVA_03915 and BACOVA_03916 are separated by 13 nucleotides BACOVA_03912: BACOVA_03912 - hypothetical protein, at 244,879 to 245,436 _03912 BACOVA_03913: BACOVA_03913 - hypothetical protein, at 245,429 to 246,022 _03913 BACOVA_03914: BACOVA_03914 - N-6 DNA Methylase, at 246,010 to 246,675 _03914 BACOVA_03915: BACOVA_03915 - site-specific recombinase, phage integrase family, at 246,694 to 247,650 _03915 BACOVA_03916: BACOVA_03916 - hypothetical protein, at 247,664 to 248,578 _03916 Position (kb) 246 247Strain fitness (log2 ratio) -2 -1 0 1 2at 245.048 kb on - strand, within BACOVA_03912at 245.048 kb on - strand, within BACOVA_03912at 245.112 kb on - strand, within BACOVA_03912at 245.115 kb on - strand, within BACOVA_03912at 245.115 kb on - strand, within BACOVA_03912at 245.115 kb on - strand, within BACOVA_03912at 245.182 kb on - strand, within BACOVA_03912at 245.185 kb on - strand, within BACOVA_03912at 245.185 kb on - strand, within BACOVA_03912at 245.203 kb on - strand, within BACOVA_03912at 245.272 kb on - strand, within BACOVA_03912at 245.272 kb on - strand, within BACOVA_03912at 245.317 kb on - strand, within BACOVA_03912at 245.343 kb on - strand, within BACOVA_03912at 245.343 kb on - strand, within BACOVA_03912at 245.429 kb on - strandat 245.466 kb on - strandat 245.466 kb on - strandat 245.466 kb on - strandat 245.507 kb on - strand, within BACOVA_03913at 245.510 kb on - strand, within BACOVA_03913at 245.514 kb on - strand, within BACOVA_03913at 245.514 kb on - strand, within BACOVA_03913at 245.522 kb on - strand, within BACOVA_03913at 245.700 kb on - strand, within BACOVA_03913at 245.700 kb on - strand, within BACOVA_03913at 245.700 kb on - strand, within BACOVA_03913at 245.704 kb on - strand, within BACOVA_03913at 245.789 kb on - strand, within BACOVA_03913at 245.865 kb on - strand, within BACOVA_03913at 245.885 kb on - strand, within BACOVA_03913at 245.897 kb on - strand, within BACOVA_03913at 245.897 kb on - strand, within BACOVA_03913at 245.976 kb on - strandat 246.105 kb on - strand, within BACOVA_03914at 246.147 kb on - strand, within BACOVA_03914at 246.165 kb on - strand, within BACOVA_03914at 246.183 kb on - strand, within BACOVA_03914at 246.229 kb on - strand, within BACOVA_03914at 246.292 kb on - strand, within BACOVA_03914at 246.292 kb on - strand, within BACOVA_03914at 246.292 kb on - strand, within BACOVA_03914at 246.304 kb on - strand, within BACOVA_03914at 246.304 kb on - strand, within BACOVA_03914at 246.322 kb on - strand, within BACOVA_03914at 246.529 kb on - strand, within BACOVA_03914at 246.546 kb on - strand, within BACOVA_03914at 246.546 kb on - strand, within BACOVA_03914at 246.552 kb on - strand, within BACOVA_03914at 246.588 kb on + strand, within BACOVA_03914at 246.589 kb on - strand, within BACOVA_03914at 246.650 kb on - strandat 246.688 kb on + strandat 246.694 kb on - strandat 246.712 kb on + strandat 246.713 kb on - strandat 246.714 kb on + strandat 246.770 kb on - strandat 246.807 kb on - strand, within BACOVA_03915at 246.813 kb on + strand, within BACOVA_03915at 246.814 kb on - strand, within BACOVA_03915at 246.814 kb on - strand, within BACOVA_03915at 246.867 kb on + strand, within BACOVA_03915at 246.895 kb on + strand, within BACOVA_03915at 246.906 kb on + strand, within BACOVA_03915at 246.914 kb on + strand, within BACOVA_03915at 246.915 kb on - strand, within BACOVA_03915at 246.970 kb on - strand, within BACOVA_03915at 246.975 kb on + strand, within BACOVA_03915at 246.975 kb on + strand, within BACOVA_03915at 246.976 kb on - strand, within BACOVA_03915at 247.005 kb on + strand, within BACOVA_03915at 247.006 kb on - strand, within BACOVA_03915at 247.010 kb on + strand, within BACOVA_03915at 247.010 kb on + strand, within BACOVA_03915at 247.048 kb on + strand, within BACOVA_03915at 247.066 kb on + strand, within BACOVA_03915at 247.115 kb on + strand, within BACOVA_03915at 247.131 kb on + strand, within BACOVA_03915at 247.142 kb on + strand, within BACOVA_03915at 247.143 kb on - strand, within BACOVA_03915at 247.152 kb on - strand, within BACOVA_03915at 247.186 kb on - strand, within BACOVA_03915at 247.191 kb on + strand, within BACOVA_03915at 247.198 kb on - strand, within BACOVA_03915at 247.215 kb on - strand, within BACOVA_03915at 247.215 kb on - strand, within BACOVA_03915at 247.215 kb on - strand, within BACOVA_03915at 247.217 kb on - strand, within BACOVA_03915at 247.217 kb on - strand, within BACOVA_03915at 247.218 kb on + strand, within BACOVA_03915at 247.218 kb on + strand, within BACOVA_03915at 247.218 kb on + strand, within BACOVA_03915at 247.218 kb on + strand, within BACOVA_03915at 247.219 kb on - strand, within BACOVA_03915at 247.237 kb on - strand, within BACOVA_03915at 247.300 kb on + strand, within BACOVA_03915at 247.301 kb on - strand, within BACOVA_03915at 247.301 kb on - strand, within BACOVA_03915at 247.302 kb on + strand, within BACOVA_03915at 247.302 kb on + strand, within BACOVA_03915at 247.303 kb on - strand, within BACOVA_03915at 247.309 kb on - strand, within BACOVA_03915at 247.314 kb on - strand, within BACOVA_03915at 247.369 kb on + strand, within BACOVA_03915at 247.377 kb on + strand, within BACOVA_03915at 247.377 kb on + strand, within BACOVA_03915at 247.377 kb on + strand, within BACOVA_03915at 247.377 kb on + strand, within BACOVA_03915at 247.396 kb on - strand, within BACOVA_03915at 247.455 kb on - strand, within BACOVA_03915at 247.465 kb on - strand, within BACOVA_03915at 247.540 kb on - strand, within BACOVA_03915at 247.540 kb on - strand, within BACOVA_03915at 247.582 kb on + strandat 247.621 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ABB 1 x (C) complex media
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245,048 - BACOVA_03912 0.30 +1.6
245,048 - BACOVA_03912 0.30 +0.0
245,112 - BACOVA_03912 0.42 -0.6
245,115 - BACOVA_03912 0.42 -0.5
245,115 - BACOVA_03912 0.42 +1.0
245,115 - BACOVA_03912 0.42 +0.0
245,182 - BACOVA_03912 0.54 -1.3
245,185 - BACOVA_03912 0.55 +2.2
245,185 - BACOVA_03912 0.55 +1.0
245,203 - BACOVA_03912 0.58 +0.7
245,272 - BACOVA_03912 0.70 +0.0
245,272 - BACOVA_03912 0.70 -1.3
245,317 - BACOVA_03912 0.78 -2.1
245,343 - BACOVA_03912 0.83 +0.2
245,343 - BACOVA_03912 0.83 +0.1
245,429 - +1.1
245,466 - +0.6
245,466 - +0.0
245,466 - -0.4
245,507 - BACOVA_03913 0.13 +1.5
245,510 - BACOVA_03913 0.14 -1.4
245,514 - BACOVA_03913 0.14 -0.2
245,514 - BACOVA_03913 0.14 +0.2
245,522 - BACOVA_03913 0.16 +0.3
245,700 - BACOVA_03913 0.46 +0.3
245,700 - BACOVA_03913 0.46 +1.0
245,700 - BACOVA_03913 0.46 +0.7
245,704 - BACOVA_03913 0.46 +0.9
245,789 - BACOVA_03913 0.61 -1.4
245,865 - BACOVA_03913 0.73 +0.0
245,885 - BACOVA_03913 0.77 +0.9
245,897 - BACOVA_03913 0.79 +0.2
245,897 - BACOVA_03913 0.79 +0.9
245,976 - +0.6
246,105 - BACOVA_03914 0.14 -0.4
246,147 - BACOVA_03914 0.21 -0.7
246,165 - BACOVA_03914 0.23 +0.4
246,183 - BACOVA_03914 0.26 -0.6
246,229 - BACOVA_03914 0.33 -1.1
246,292 - BACOVA_03914 0.42 +0.5
246,292 - BACOVA_03914 0.42 +0.8
246,292 - BACOVA_03914 0.42 +0.3
246,304 - BACOVA_03914 0.44 +0.3
246,304 - BACOVA_03914 0.44 +0.2
246,322 - BACOVA_03914 0.47 -0.3
246,529 - BACOVA_03914 0.78 -0.3
246,546 - BACOVA_03914 0.80 +0.0
246,546 - BACOVA_03914 0.80 +1.3
246,552 - BACOVA_03914 0.81 +0.3
246,588 + BACOVA_03914 0.87 -0.1
246,589 - BACOVA_03914 0.87 +0.2
246,650 - +0.8
246,688 + -0.2
246,694 - -0.4
246,712 + -1.4
246,713 - -1.6
246,714 + +0.9
246,770 - -0.0
246,807 - BACOVA_03915 0.12 +0.4
246,813 + BACOVA_03915 0.12 -1.2
246,814 - BACOVA_03915 0.13 -1.0
246,814 - BACOVA_03915 0.13 +0.0
246,867 + BACOVA_03915 0.18 +0.6
246,895 + BACOVA_03915 0.21 +1.4
246,906 + BACOVA_03915 0.22 +1.8
246,914 + BACOVA_03915 0.23 -0.6
246,915 - BACOVA_03915 0.23 -0.0
246,970 - BACOVA_03915 0.29 +0.8
246,975 + BACOVA_03915 0.29 +0.5
246,975 + BACOVA_03915 0.29 +0.7
246,976 - BACOVA_03915 0.29 +0.6
247,005 + BACOVA_03915 0.32 +1.8
247,006 - BACOVA_03915 0.33 +0.7
247,010 + BACOVA_03915 0.33 +0.4
247,010 + BACOVA_03915 0.33 +0.3
247,048 + BACOVA_03915 0.37 +0.5
247,066 + BACOVA_03915 0.39 +0.1
247,115 + BACOVA_03915 0.44 -0.2
247,131 + BACOVA_03915 0.46 +0.4
247,142 + BACOVA_03915 0.47 +0.5
247,143 - BACOVA_03915 0.47 -0.4
247,152 - BACOVA_03915 0.48 +0.4
247,186 - BACOVA_03915 0.51 -0.2
247,191 + BACOVA_03915 0.52 +0.8
247,198 - BACOVA_03915 0.53 +0.3
247,215 - BACOVA_03915 0.54 +0.4
247,215 - BACOVA_03915 0.54 -0.1
247,215 - BACOVA_03915 0.54 +0.4
247,217 - BACOVA_03915 0.55 -0.5
247,217 - BACOVA_03915 0.55 -0.6
247,218 + BACOVA_03915 0.55 +0.1
247,218 + BACOVA_03915 0.55 +0.6
247,218 + BACOVA_03915 0.55 +0.0
247,218 + BACOVA_03915 0.55 +0.4
247,219 - BACOVA_03915 0.55 -1.7
247,237 - BACOVA_03915 0.57 +0.8
247,300 + BACOVA_03915 0.63 +0.3
247,301 - BACOVA_03915 0.63 -0.4
247,301 - BACOVA_03915 0.63 -0.0
247,302 + BACOVA_03915 0.64 -2.2
247,302 + BACOVA_03915 0.64 +0.8
247,303 - BACOVA_03915 0.64 +0.5
247,309 - BACOVA_03915 0.64 +0.2
247,314 - BACOVA_03915 0.65 -0.8
247,369 + BACOVA_03915 0.71 +0.2
247,377 + BACOVA_03915 0.71 +0.4
247,377 + BACOVA_03915 0.71 +1.0
247,377 + BACOVA_03915 0.71 -1.2
247,377 + BACOVA_03915 0.71 +1.5
247,396 - BACOVA_03915 0.73 +0.3
247,455 - BACOVA_03915 0.80 -0.3
247,465 - BACOVA_03915 0.81 +0.9
247,540 - BACOVA_03915 0.88 -0.0
247,540 - BACOVA_03915 0.88 -0.5
247,582 + +1.2
247,621 - -0.4

Or see this region's nucleotide sequence