Experiment: ABB 1 x (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02589 and BACOVA_02590 are separated by 36 nucleotides BACOVA_02590 and BACOVA_02591 overlap by 4 nucleotides BACOVA_02591 and BACOVA_02592 are separated by 121 nucleotides
BACOVA_02589: BACOVA_02589 - lipid kinase, YegS/Rv2252/BmrU family, at 359,191 to 360,216
_02589
BACOVA_02590: BACOVA_02590 - aspartate--tRNA ligase, at 360,253 to 362,088
_02590
BACOVA_02591: BACOVA_02591 - GtrA-like protein, at 362,085 to 362,474
_02591
BACOVA_02592: BACOVA_02592 - hydrolase, carbon-nitrogen family, at 362,596 to 363,480
_02592
Position (kb) 360
361
362
363 Strain fitness (log2 ratio) -2
-1
0
1
2 at 360.230 kb on + strand at 360.251 kb on + strand at 362.104 kb on + strand at 362.116 kb on + strand at 362.196 kb on + strand, within BACOVA_02591 at 362.210 kb on + strand, within BACOVA_02591 at 362.212 kb on + strand, within BACOVA_02591 at 362.212 kb on + strand, within BACOVA_02591 at 362.220 kb on + strand, within BACOVA_02591 at 362.220 kb on + strand, within BACOVA_02591 at 362.227 kb on + strand, within BACOVA_02591 at 362.246 kb on + strand, within BACOVA_02591 at 362.291 kb on + strand, within BACOVA_02591 at 362.312 kb on - strand, within BACOVA_02591 at 362.341 kb on - strand, within BACOVA_02591 at 362.374 kb on + strand, within BACOVA_02591 at 362.428 kb on - strand, within BACOVA_02591 at 362.446 kb on + strand at 362.481 kb on + strand at 362.482 kb on - strand at 362.493 kb on + strand at 362.495 kb on + strand at 362.495 kb on + strand at 362.561 kb on + strand at 362.617 kb on - strand at 362.617 kb on - strand at 362.627 kb on + strand at 362.628 kb on - strand at 362.695 kb on + strand, within BACOVA_02592 at 362.828 kb on - strand, within BACOVA_02592 at 362.963 kb on - strand, within BACOVA_02592 at 362.981 kb on - strand, within BACOVA_02592 at 363.025 kb on + strand, within BACOVA_02592 at 363.025 kb on + strand, within BACOVA_02592 at 363.026 kb on - strand, within BACOVA_02592 at 363.028 kb on + strand, within BACOVA_02592 at 363.028 kb on + strand, within BACOVA_02592 at 363.029 kb on - strand, within BACOVA_02592 at 363.029 kb on - strand, within BACOVA_02592 at 363.032 kb on - strand, within BACOVA_02592
Per-strain Table
Position Strand Gene LocusTag Fraction ABB 1 x (C) complex media remove 360,230 + -0.0 360,251 + +1.1 362,104 + +0.8 362,116 + +0.2 362,196 + BACOVA_02591 0.28 -1.7 362,210 + BACOVA_02591 0.32 +2.4 362,212 + BACOVA_02591 0.33 -0.5 362,212 + BACOVA_02591 0.33 -0.1 362,220 + BACOVA_02591 0.35 +0.4 362,220 + BACOVA_02591 0.35 -0.0 362,227 + BACOVA_02591 0.36 +0.2 362,246 + BACOVA_02591 0.41 -0.9 362,291 + BACOVA_02591 0.53 -0.3 362,312 - BACOVA_02591 0.58 -0.5 362,341 - BACOVA_02591 0.66 +0.2 362,374 + BACOVA_02591 0.74 +0.9 362,428 - BACOVA_02591 0.88 -0.2 362,446 + +0.3 362,481 + +0.9 362,482 - -0.6 362,493 + -0.1 362,495 + +0.5 362,495 + +0.6 362,561 + +1.0 362,617 - -1.7 362,617 - -0.5 362,627 + -2.1 362,628 - -1.5 362,695 + BACOVA_02592 0.11 -2.0 362,828 - BACOVA_02592 0.26 -1.3 362,963 - BACOVA_02592 0.41 +1.1 362,981 - BACOVA_02592 0.44 -1.4 363,025 + BACOVA_02592 0.48 -0.8 363,025 + BACOVA_02592 0.48 -2.4 363,026 - BACOVA_02592 0.49 -2.0 363,028 + BACOVA_02592 0.49 +1.4 363,028 + BACOVA_02592 0.49 -0.2 363,029 - BACOVA_02592 0.49 -0.7 363,029 - BACOVA_02592 0.49 -1.3 363,032 - BACOVA_02592 0.49 -0.5
Or see this region's nucleotide sequence