Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01693

Experiment: ABB 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01689 and BACOVA_01690 overlap by 4 nucleotidesBACOVA_01690 and BACOVA_01691 are separated by 158 nucleotidesBACOVA_01691 and BACOVA_01692 are separated by 119 nucleotidesBACOVA_01692 and BACOVA_01693 overlap by 44 nucleotidesBACOVA_01693 and BACOVA_01694 are separated by 115 nucleotidesBACOVA_01694 and BACOVA_01695 are separated by 60 nucleotides BACOVA_01689: BACOVA_01689 - hypothetical protein, at 111,109 to 111,522 _01689 BACOVA_01690: BACOVA_01690 - hypothetical protein, at 111,519 to 111,746 _01690 BACOVA_01691: BACOVA_01691 - bacterial transferase hexapeptide repeat protein, at 111,905 to 112,090 _01691 BACOVA_01692: BACOVA_01692 - hypothetical protein, at 112,210 to 112,320 _01692 BACOVA_01693: BACOVA_01693 - hypothetical protein, at 112,277 to 112,366 _01693 BACOVA_01694: BACOVA_01694 - hypothetical protein, at 112,482 to 113,030 _01694 BACOVA_01695: BACOVA_01695 - hypothetical protein, at 113,091 to 114,881 _01695 Position (kb) 112 113Strain fitness (log2 ratio) -1 0 1 2at 111.277 kb on + strand, within BACOVA_01689at 111.278 kb on - strand, within BACOVA_01689at 111.283 kb on - strand, within BACOVA_01689at 111.284 kb on + strand, within BACOVA_01689at 111.285 kb on - strand, within BACOVA_01689at 111.330 kb on + strand, within BACOVA_01689at 111.331 kb on - strand, within BACOVA_01689at 111.345 kb on + strand, within BACOVA_01689at 111.352 kb on - strand, within BACOVA_01689at 111.420 kb on + strand, within BACOVA_01689at 111.481 kb on + strandat 111.482 kb on - strandat 111.526 kb on - strandat 111.526 kb on - strandat 111.590 kb on + strand, within BACOVA_01690at 111.590 kb on + strand, within BACOVA_01690at 111.590 kb on + strand, within BACOVA_01690at 111.605 kb on - strand, within BACOVA_01690at 111.653 kb on - strand, within BACOVA_01690at 111.676 kb on + strand, within BACOVA_01690at 111.697 kb on - strand, within BACOVA_01690at 111.698 kb on + strand, within BACOVA_01690at 111.698 kb on + strand, within BACOVA_01690at 111.698 kb on + strand, within BACOVA_01690at 111.698 kb on + strand, within BACOVA_01690at 111.699 kb on - strand, within BACOVA_01690at 111.699 kb on - strand, within BACOVA_01690at 111.781 kb on - strandat 111.786 kb on + strandat 111.850 kb on - strandat 111.850 kb on - strandat 111.850 kb on - strandat 111.852 kb on + strandat 111.857 kb on - strandat 111.904 kb on + strandat 111.969 kb on + strand, within BACOVA_01691at 111.970 kb on - strand, within BACOVA_01691at 112.016 kb on - strand, within BACOVA_01691at 112.088 kb on + strandat 112.091 kb on + strandat 112.091 kb on + strandat 112.091 kb on + strandat 112.092 kb on - strandat 112.115 kb on + strandat 112.122 kb on + strandat 112.122 kb on + strandat 112.123 kb on - strandat 112.123 kb on - strandat 112.125 kb on - strandat 112.144 kb on - strandat 112.160 kb on - strandat 112.165 kb on + strandat 112.174 kb on + strandat 112.175 kb on - strandat 112.175 kb on - strandat 112.175 kb on - strandat 112.179 kb on + strandat 112.180 kb on - strandat 112.189 kb on - strandat 112.192 kb on + strandat 112.192 kb on + strandat 112.342 kb on + strand, within BACOVA_01693at 112.411 kb on + strandat 112.412 kb on - strandat 112.466 kb on + strandat 112.471 kb on - strandat 112.490 kb on + strandat 112.493 kb on - strandat 112.493 kb on - strandat 112.504 kb on + strandat 112.505 kb on - strandat 112.532 kb on + strandat 112.561 kb on + strand, within BACOVA_01694at 112.561 kb on + strand, within BACOVA_01694at 112.613 kb on - strand, within BACOVA_01694at 112.669 kb on + strand, within BACOVA_01694at 112.670 kb on - strand, within BACOVA_01694at 112.806 kb on - strand, within BACOVA_01694at 112.838 kb on + strand, within BACOVA_01694at 112.838 kb on + strand, within BACOVA_01694at 112.839 kb on - strand, within BACOVA_01694at 112.876 kb on + strand, within BACOVA_01694at 112.923 kb on - strand, within BACOVA_01694at 112.923 kb on - strand, within BACOVA_01694at 112.934 kb on + strand, within BACOVA_01694at 112.934 kb on + strand, within BACOVA_01694at 112.935 kb on - strand, within BACOVA_01694at 112.938 kb on + strand, within BACOVA_01694at 112.965 kb on - strand, within BACOVA_01694at 113.045 kb on + strandat 113.058 kb on - strandat 113.058 kb on - strandat 113.093 kb on - strandat 113.131 kb on - strandat 113.131 kb on - strandat 113.136 kb on + strandat 113.165 kb on + strandat 113.166 kb on - strandat 113.306 kb on - strand, within BACOVA_01695at 113.308 kb on - strand, within BACOVA_01695

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Per-strain Table

Position Strand Gene LocusTag Fraction ABB 1 x (C) complex media
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111,277 + BACOVA_01689 0.41 -1.4
111,278 - BACOVA_01689 0.41 -0.6
111,283 - BACOVA_01689 0.42 +0.0
111,284 + BACOVA_01689 0.42 -1.3
111,285 - BACOVA_01689 0.43 +0.5
111,330 + BACOVA_01689 0.53 +0.0
111,331 - BACOVA_01689 0.54 +0.6
111,345 + BACOVA_01689 0.57 +0.6
111,352 - BACOVA_01689 0.59 +1.1
111,420 + BACOVA_01689 0.75 +0.1
111,481 + +0.1
111,482 - -0.3
111,526 - +0.4
111,526 - +0.6
111,590 + BACOVA_01690 0.31 +0.1
111,590 + BACOVA_01690 0.31 -1.1
111,590 + BACOVA_01690 0.31 -0.1
111,605 - BACOVA_01690 0.38 +1.0
111,653 - BACOVA_01690 0.59 -1.7
111,676 + BACOVA_01690 0.69 -0.5
111,697 - BACOVA_01690 0.78 +0.8
111,698 + BACOVA_01690 0.79 +0.0
111,698 + BACOVA_01690 0.79 -0.3
111,698 + BACOVA_01690 0.79 +0.6
111,698 + BACOVA_01690 0.79 -0.3
111,699 - BACOVA_01690 0.79 +0.4
111,699 - BACOVA_01690 0.79 +0.1
111,781 - -0.1
111,786 + +0.8
111,850 - +0.4
111,850 - +0.6
111,850 - -0.3
111,852 + +0.0
111,857 - -0.3
111,904 + -0.9
111,969 + BACOVA_01691 0.34 +0.3
111,970 - BACOVA_01691 0.35 -0.4
112,016 - BACOVA_01691 0.60 -1.0
112,088 + +0.5
112,091 + +0.1
112,091 + +0.1
112,091 + -0.4
112,092 - -0.2
112,115 + -0.5
112,122 + +0.2
112,122 + +1.2
112,123 - +0.0
112,123 - -0.8
112,125 - +1.2
112,144 - +0.2
112,160 - +0.2
112,165 + +0.4
112,174 + +0.4
112,175 - -0.1
112,175 - -0.1
112,175 - +0.3
112,179 + -0.0
112,180 - +0.2
112,189 - +1.9
112,192 + +0.7
112,192 + -0.8
112,342 + BACOVA_01693 0.72 -0.0
112,411 + -1.1
112,412 - +0.6
112,466 + +0.7
112,471 - -0.4
112,490 + -1.5
112,493 - -0.3
112,493 - -0.3
112,504 + -0.6
112,505 - -0.9
112,532 + -1.2
112,561 + BACOVA_01694 0.14 -0.1
112,561 + BACOVA_01694 0.14 +0.4
112,613 - BACOVA_01694 0.24 +0.9
112,669 + BACOVA_01694 0.34 +0.5
112,670 - BACOVA_01694 0.34 -0.7
112,806 - BACOVA_01694 0.59 -0.6
112,838 + BACOVA_01694 0.65 -0.5
112,838 + BACOVA_01694 0.65 -0.6
112,839 - BACOVA_01694 0.65 +0.1
112,876 + BACOVA_01694 0.72 -1.0
112,923 - BACOVA_01694 0.80 -0.2
112,923 - BACOVA_01694 0.80 -1.5
112,934 + BACOVA_01694 0.82 +0.1
112,934 + BACOVA_01694 0.82 +0.7
112,935 - BACOVA_01694 0.83 -0.3
112,938 + BACOVA_01694 0.83 -0.2
112,965 - BACOVA_01694 0.88 -0.2
113,045 + -1.6
113,058 - -0.3
113,058 - +0.1
113,093 - +0.8
113,131 - -1.1
113,131 - -0.6
113,136 + +1.6
113,165 + -0.4
113,166 - -0.2
113,306 - BACOVA_01695 0.12 +0.1
113,308 - BACOVA_01695 0.12 +1.3

Or see this region's nucleotide sequence