Strain Fitness in Escherichia fergusonii Becca around EFB2_04419

Experiment: BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

No fitness data for strains within 4,638,939 to 4,641,385
download SVG
500 ntEFB2_04417 and EFB2_04418 are separated by 69 nucleotidesEFB2_04418 and EFB2_04419 are separated by 40 nucleotidesEFB2_04419 and EFB2_04420 are separated by 163 nucleotidesEFB2_04420 and EFB2_04421 are separated by 107 nucleotides EFB2_04417: EFB2_04417 - Outer membrane usher protein FimD, at 4,636,503 to 4,639,133 _04417 EFB2_04418: EFB2_04418 - Chaperone protein FocC, at 4,639,203 to 4,639,898 _04418 EFB2_04419: EFB2_04419 - putative major fimbrial subunit LpfA, at 4,639,939 to 4,640,385 _04419 EFB2_04420: EFB2_04420 - S-fimbrial protein subunit SfaA, at 4,640,549 to 4,641,094 _04420 EFB2_04421: EFB2_04421 - hypothetical protein, at 4,641,202 to 4,641,294 _04421