Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05155

Experiment: D-Maltose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_05153 and BACOVA_05154 are separated by 139 nucleotidesBACOVA_05154 and BACOVA_05155 are separated by 130 nucleotidesBACOVA_05155 and BACOVA_05156 are separated by 122 nucleotidesBACOVA_05156 and BACOVA_05157 are separated by 632 nucleotides BACOVA_05153: BACOVA_05153 - glutamate--ammonia ligase, catalytic domain protein, at 633,715 to 635,904 _05153 BACOVA_05154: BACOVA_05154 - hypothetical protein, at 636,044 to 636,517 _05154 BACOVA_05155: BACOVA_05155 - hypothetical protein, at 636,648 to 636,818 _05155 BACOVA_05156: BACOVA_05156 - hypothetical protein, at 636,941 to 637,069 _05156 BACOVA_05157: BACOVA_05157 - hypothetical protein, at 637,702 to 638,526 _05157 Position (kb) 636 637Strain fitness (log2 ratio) -2 -1 0 1 2at 635.718 kb on + strandat 635.725 kb on - strandat 635.982 kb on - strandat 636.012 kb on + strandat 636.039 kb on + strandat 636.045 kb on + strandat 636.070 kb on + strandat 636.103 kb on + strand, within BACOVA_05154at 636.103 kb on + strand, within BACOVA_05154at 636.106 kb on - strand, within BACOVA_05154at 636.209 kb on - strand, within BACOVA_05154at 636.236 kb on + strand, within BACOVA_05154at 636.237 kb on - strand, within BACOVA_05154at 636.353 kb on + strand, within BACOVA_05154at 636.353 kb on + strand, within BACOVA_05154at 636.354 kb on - strand, within BACOVA_05154at 636.471 kb on - strandat 636.492 kb on - strandat 636.500 kb on - strandat 636.517 kb on + strandat 636.520 kb on + strandat 636.521 kb on - strandat 636.522 kb on + strandat 636.527 kb on - strandat 636.527 kb on - strandat 636.558 kb on - strandat 636.616 kb on + strandat 636.617 kb on - strandat 636.648 kb on - strandat 636.722 kb on + strand, within BACOVA_05155at 636.723 kb on - strand, within BACOVA_05155at 636.723 kb on - strand, within BACOVA_05155at 636.761 kb on - strand, within BACOVA_05155at 636.761 kb on - strand, within BACOVA_05155at 636.784 kb on - strand, within BACOVA_05155at 636.786 kb on - strand, within BACOVA_05155at 636.806 kb on + strandat 636.807 kb on - strandat 636.810 kb on - strandat 636.810 kb on - strandat 636.810 kb on - strandat 636.812 kb on - strandat 636.812 kb on - strandat 636.813 kb on + strandat 636.813 kb on + strandat 636.814 kb on - strandat 636.814 kb on - strandat 636.814 kb on - strandat 636.814 kb on - strandat 636.816 kb on + strandat 636.816 kb on + strandat 636.817 kb on - strandat 636.817 kb on - strandat 636.817 kb on - strandat 636.817 kb on - strandat 636.820 kb on - strandat 636.825 kb on - strandat 636.825 kb on - strandat 636.825 kb on - strandat 636.827 kb on - strandat 636.827 kb on - strandat 636.827 kb on - strandat 636.830 kb on - strandat 636.867 kb on - strandat 636.867 kb on - strandat 636.871 kb on + strandat 636.871 kb on + strandat 636.894 kb on + strandat 636.901 kb on - strandat 636.901 kb on - strandat 636.979 kb on + strand, within BACOVA_05156at 636.980 kb on - strand, within BACOVA_05156at 637.053 kb on + strand, within BACOVA_05156at 637.064 kb on + strandat 637.085 kb on - strandat 637.094 kb on - strandat 637.096 kb on - strandat 637.096 kb on - strandat 637.096 kb on - strandat 637.191 kb on - strandat 637.191 kb on - strandat 637.222 kb on - strandat 637.397 kb on - strandat 637.397 kb on - strandat 637.399 kb on - strandat 637.461 kb on + strandat 637.582 kb on + strandat 637.585 kb on + strandat 637.586 kb on - strandat 637.592 kb on + strandat 637.605 kb on + strandat 637.612 kb on - strandat 637.638 kb on + strandat 637.639 kb on - strandat 637.639 kb on - strandat 637.668 kb on + strandat 637.698 kb on - strandat 637.698 kb on - strandat 637.817 kb on + strand, within BACOVA_05157at 637.818 kb on - strand, within BACOVA_05157

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose 10 mM (C)
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635,718 + -0.5
635,725 - -1.8
635,982 - +0.6
636,012 + +0.5
636,039 + +0.2
636,045 + +0.1
636,070 + -0.1
636,103 + BACOVA_05154 0.12 +1.1
636,103 + BACOVA_05154 0.12 -0.6
636,106 - BACOVA_05154 0.13 -0.5
636,209 - BACOVA_05154 0.35 +0.1
636,236 + BACOVA_05154 0.41 -0.8
636,237 - BACOVA_05154 0.41 +0.1
636,353 + BACOVA_05154 0.65 +0.4
636,353 + BACOVA_05154 0.65 +0.3
636,354 - BACOVA_05154 0.65 -0.2
636,471 - -0.9
636,492 - +0.0
636,500 - +0.9
636,517 + -0.3
636,520 + +0.0
636,521 - -1.0
636,522 + +1.6
636,527 - -0.4
636,527 - -0.4
636,558 - +0.2
636,616 + -0.5
636,617 - -0.9
636,648 - +0.4
636,722 + BACOVA_05155 0.43 -2.1
636,723 - BACOVA_05155 0.44 -0.7
636,723 - BACOVA_05155 0.44 -0.3
636,761 - BACOVA_05155 0.66 -1.1
636,761 - BACOVA_05155 0.66 -0.2
636,784 - BACOVA_05155 0.80 -0.6
636,786 - BACOVA_05155 0.81 +0.2
636,806 + +0.2
636,807 - -1.3
636,810 - -0.3
636,810 - +0.5
636,810 - +0.8
636,812 - +0.1
636,812 - +0.3
636,813 + +0.1
636,813 + -1.4
636,814 - +1.5
636,814 - +0.3
636,814 - +0.5
636,814 - -0.7
636,816 + +0.5
636,816 + -0.2
636,817 - -0.1
636,817 - -0.2
636,817 - +0.9
636,817 - -1.5
636,820 - -0.5
636,825 - -0.1
636,825 - +0.1
636,825 - -1.8
636,827 - +0.8
636,827 - -0.6
636,827 - -0.1
636,830 - -0.9
636,867 - -0.6
636,867 - -0.9
636,871 + +0.3
636,871 + -1.6
636,894 + -0.6
636,901 - -0.0
636,901 - -0.5
636,979 + BACOVA_05156 0.29 +0.7
636,980 - BACOVA_05156 0.30 +0.7
637,053 + BACOVA_05156 0.87 +0.1
637,064 + -0.5
637,085 - -0.4
637,094 - -1.4
637,096 - -0.5
637,096 - -0.3
637,096 - +0.1
637,191 - -0.1
637,191 - -2.1
637,222 - -0.4
637,397 - +0.0
637,397 - -0.6
637,399 - -2.6
637,461 + +0.4
637,582 + -1.4
637,585 + -0.2
637,586 - +0.2
637,592 + -0.0
637,605 + -0.3
637,612 - -0.2
637,638 + +1.8
637,639 - -1.6
637,639 - +0.3
637,668 + +0.5
637,698 - -0.7
637,698 - +0.1
637,817 + BACOVA_05157 0.14 +0.2
637,818 - BACOVA_05157 0.14 -0.1

Or see this region's nucleotide sequence