Experiment: D-Maltose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05150 and BACOVA_05151 are separated by 67 nucleotides BACOVA_05151 and BACOVA_05152 are separated by 34 nucleotides BACOVA_05152 and BACOVA_05153 are separated by 116 nucleotides
BACOVA_05150: BACOVA_05150 - sigma factor regulatory protein, FecR/PupR family, at 631,080 to 632,240
_05150
BACOVA_05151: BACOVA_05151 - RNA polymerase sigma-70 factor, at 632,308 to 632,862
_05151
BACOVA_05152: BACOVA_05152 - cyclic nucleotide-binding domain protein, at 632,897 to 633,598
_05152
BACOVA_05153: BACOVA_05153 - glutamate--ammonia ligase, catalytic domain protein, at 633,715 to 635,904
_05153
Position (kb) 632
633
634 Strain fitness (log2 ratio) -2
-1
0
1
2 at 631.916 kb on - strand, within BACOVA_05150 at 631.916 kb on - strand, within BACOVA_05150 at 631.916 kb on - strand, within BACOVA_05150 at 631.925 kb on - strand, within BACOVA_05150 at 631.936 kb on - strand, within BACOVA_05150 at 631.941 kb on + strand, within BACOVA_05150 at 631.948 kb on - strand, within BACOVA_05150 at 631.948 kb on - strand, within BACOVA_05150 at 631.964 kb on - strand, within BACOVA_05150 at 631.964 kb on - strand, within BACOVA_05150 at 632.024 kb on - strand, within BACOVA_05150 at 632.065 kb on - strand, within BACOVA_05150 at 632.084 kb on - strand, within BACOVA_05150 at 632.097 kb on + strand, within BACOVA_05150 at 632.113 kb on - strand, within BACOVA_05150 at 632.152 kb on + strand at 632.317 kb on + strand at 632.459 kb on + strand, within BACOVA_05151 at 632.460 kb on - strand, within BACOVA_05151 at 632.462 kb on - strand, within BACOVA_05151 at 632.557 kb on - strand, within BACOVA_05151 at 632.583 kb on - strand, within BACOVA_05151 at 632.608 kb on + strand, within BACOVA_05151 at 632.643 kb on - strand, within BACOVA_05151 at 632.707 kb on + strand, within BACOVA_05151 at 632.750 kb on + strand, within BACOVA_05151 at 632.776 kb on - strand, within BACOVA_05151 at 632.776 kb on - strand, within BACOVA_05151 at 632.780 kb on + strand, within BACOVA_05151 at 632.780 kb on + strand, within BACOVA_05151 at 632.781 kb on - strand, within BACOVA_05151 at 632.783 kb on + strand, within BACOVA_05151 at 632.784 kb on - strand, within BACOVA_05151 at 632.784 kb on - strand, within BACOVA_05151 at 632.794 kb on + strand, within BACOVA_05151 at 632.795 kb on - strand, within BACOVA_05151 at 632.828 kb on - strand at 632.840 kb on - strand at 632.850 kb on + strand at 632.854 kb on + strand at 632.854 kb on + strand at 632.854 kb on + strand at 632.855 kb on - strand at 632.855 kb on - strand at 632.855 kb on - strand at 632.855 kb on - strand at 632.855 kb on - strand at 632.867 kb on + strand at 632.898 kb on + strand at 633.226 kb on + strand, within BACOVA_05152 at 633.260 kb on - strand, within BACOVA_05152 at 633.483 kb on + strand, within BACOVA_05152 at 633.492 kb on - strand, within BACOVA_05152 at 633.542 kb on + strand at 633.619 kb on - strand at 633.667 kb on - strand at 633.738 kb on + strand at 633.878 kb on - strand at 633.911 kb on - strand at 634.119 kb on - strand, within BACOVA_05153 at 634.183 kb on - strand, within BACOVA_05153 at 634.209 kb on + strand, within BACOVA_05153 at 634.210 kb on - strand, within BACOVA_05153 at 634.394 kb on - strand, within BACOVA_05153
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose 10 mM (C) remove 631,916 - BACOVA_05150 0.72 -0.6 631,916 - BACOVA_05150 0.72 -1.0 631,916 - BACOVA_05150 0.72 -2.0 631,925 - BACOVA_05150 0.73 -0.5 631,936 - BACOVA_05150 0.74 +0.3 631,941 + BACOVA_05150 0.74 -0.5 631,948 - BACOVA_05150 0.75 -0.6 631,948 - BACOVA_05150 0.75 +0.7 631,964 - BACOVA_05150 0.76 +0.8 631,964 - BACOVA_05150 0.76 -0.6 632,024 - BACOVA_05150 0.81 -0.0 632,065 - BACOVA_05150 0.85 +0.8 632,084 - BACOVA_05150 0.86 -0.0 632,097 + BACOVA_05150 0.88 +0.5 632,113 - BACOVA_05150 0.89 -0.6 632,152 + -0.4 632,317 + +0.5 632,459 + BACOVA_05151 0.27 -0.3 632,460 - BACOVA_05151 0.27 +0.1 632,462 - BACOVA_05151 0.28 -0.0 632,557 - BACOVA_05151 0.45 +0.1 632,583 - BACOVA_05151 0.50 +1.3 632,608 + BACOVA_05151 0.54 +0.4 632,643 - BACOVA_05151 0.60 +0.9 632,707 + BACOVA_05151 0.72 +0.7 632,750 + BACOVA_05151 0.80 -1.0 632,776 - BACOVA_05151 0.84 -0.5 632,776 - BACOVA_05151 0.84 +0.7 632,780 + BACOVA_05151 0.85 +0.5 632,780 + BACOVA_05151 0.85 +0.9 632,781 - BACOVA_05151 0.85 +0.3 632,783 + BACOVA_05151 0.86 +1.5 632,784 - BACOVA_05151 0.86 -1.0 632,784 - BACOVA_05151 0.86 -0.1 632,794 + BACOVA_05151 0.88 -1.5 632,795 - BACOVA_05151 0.88 +0.8 632,828 - +0.5 632,840 - -1.3 632,850 + -0.4 632,854 + +1.8 632,854 + -0.0 632,854 + -0.0 632,855 - -0.2 632,855 - +0.2 632,855 - +0.5 632,855 - -0.2 632,855 - +0.7 632,867 + +1.5 632,898 + +1.2 633,226 + BACOVA_05152 0.47 -1.0 633,260 - BACOVA_05152 0.52 +0.1 633,483 + BACOVA_05152 0.83 +1.1 633,492 - BACOVA_05152 0.85 -0.5 633,542 + -1.2 633,619 - -1.0 633,667 - -1.6 633,738 + -1.0 633,878 - -1.3 633,911 - -1.8 634,119 - BACOVA_05153 0.18 -0.5 634,183 - BACOVA_05153 0.21 -1.2 634,209 + BACOVA_05153 0.23 -2.0 634,210 - BACOVA_05153 0.23 -0.8 634,394 - BACOVA_05153 0.31 -2.0
Or see this region's nucleotide sequence