Experiment: D-Maltose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00904 and BACOVA_00905 are separated by 115 nucleotides BACOVA_00905 and BACOVA_00906 are separated by 243 nucleotides
BACOVA_00904: BACOVA_00904 - DEAD/DEAH box helicase, at 35,278 to 37,212
_00904
BACOVA_00905: BACOVA_00905 - tyrosine phosphatase family, at 37,328 to 38,317
_00905
BACOVA_00906: BACOVA_00906 - hypothetical protein, at 38,561 to 40,027
_00906
Position (kb) 37
38
39 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 36.360 kb on + strand, within BACOVA_00904 at 36.427 kb on + strand, within BACOVA_00904 at 36.463 kb on - strand, within BACOVA_00904 at 36.477 kb on + strand, within BACOVA_00904 at 36.482 kb on + strand, within BACOVA_00904 at 36.507 kb on + strand, within BACOVA_00904 at 36.508 kb on - strand, within BACOVA_00904 at 36.548 kb on + strand, within BACOVA_00904 at 36.692 kb on - strand, within BACOVA_00904 at 36.777 kb on + strand, within BACOVA_00904 at 36.778 kb on - strand, within BACOVA_00904 at 36.781 kb on + strand, within BACOVA_00904 at 36.781 kb on + strand, within BACOVA_00904 at 36.781 kb on + strand, within BACOVA_00904 at 36.782 kb on - strand, within BACOVA_00904 at 36.788 kb on - strand, within BACOVA_00904 at 36.828 kb on + strand, within BACOVA_00904 at 36.833 kb on - strand, within BACOVA_00904 at 36.833 kb on - strand, within BACOVA_00904 at 36.866 kb on - strand, within BACOVA_00904 at 36.866 kb on - strand, within BACOVA_00904 at 36.866 kb on - strand, within BACOVA_00904 at 36.866 kb on - strand, within BACOVA_00904 at 36.893 kb on + strand, within BACOVA_00904 at 36.893 kb on + strand, within BACOVA_00904 at 36.893 kb on + strand, within BACOVA_00904 at 36.893 kb on + strand, within BACOVA_00904 at 36.895 kb on + strand, within BACOVA_00904 at 36.895 kb on + strand, within BACOVA_00904 at 36.895 kb on + strand, within BACOVA_00904 at 36.896 kb on - strand, within BACOVA_00904 at 36.899 kb on - strand, within BACOVA_00904 at 36.902 kb on - strand, within BACOVA_00904 at 36.904 kb on + strand, within BACOVA_00904 at 36.911 kb on - strand, within BACOVA_00904 at 36.923 kb on + strand, within BACOVA_00904 at 36.952 kb on + strand, within BACOVA_00904 at 37.085 kb on - strand at 37.085 kb on - strand at 37.085 kb on - strand at 37.085 kb on - strand at 37.103 kb on - strand at 37.174 kb on + strand at 37.214 kb on - strand at 37.224 kb on - strand at 37.279 kb on + strand at 37.283 kb on - strand at 37.307 kb on + strand at 37.319 kb on + strand at 37.319 kb on + strand at 37.329 kb on + strand at 37.330 kb on - strand at 37.330 kb on - strand at 37.344 kb on - strand at 37.401 kb on + strand at 37.402 kb on - strand at 37.410 kb on - strand at 37.419 kb on + strand at 37.474 kb on - strand, within BACOVA_00905 at 37.483 kb on + strand, within BACOVA_00905 at 37.484 kb on - strand, within BACOVA_00905 at 37.513 kb on + strand, within BACOVA_00905 at 37.513 kb on + strand, within BACOVA_00905 at 37.514 kb on - strand, within BACOVA_00905 at 37.514 kb on - strand, within BACOVA_00905 at 37.514 kb on - strand, within BACOVA_00905 at 37.515 kb on + strand, within BACOVA_00905 at 37.515 kb on + strand, within BACOVA_00905 at 37.516 kb on - strand, within BACOVA_00905 at 37.521 kb on + strand, within BACOVA_00905 at 37.522 kb on - strand, within BACOVA_00905 at 37.540 kb on + strand, within BACOVA_00905 at 37.543 kb on + strand, within BACOVA_00905 at 37.543 kb on + strand, within BACOVA_00905 at 37.544 kb on - strand, within BACOVA_00905 at 37.555 kb on + strand, within BACOVA_00905 at 37.566 kb on + strand, within BACOVA_00905 at 37.576 kb on + strand, within BACOVA_00905 at 37.614 kb on - strand, within BACOVA_00905 at 37.651 kb on + strand, within BACOVA_00905 at 37.651 kb on + strand, within BACOVA_00905 at 37.652 kb on - strand, within BACOVA_00905 at 37.722 kb on + strand, within BACOVA_00905 at 37.723 kb on - strand, within BACOVA_00905 at 37.728 kb on - strand, within BACOVA_00905 at 37.734 kb on - strand, within BACOVA_00905 at 37.754 kb on + strand, within BACOVA_00905 at 37.754 kb on + strand, within BACOVA_00905 at 37.764 kb on + strand, within BACOVA_00905 at 37.769 kb on - strand, within BACOVA_00905 at 37.781 kb on + strand, within BACOVA_00905 at 37.840 kb on + strand, within BACOVA_00905 at 37.840 kb on + strand, within BACOVA_00905 at 37.840 kb on + strand, within BACOVA_00905 at 37.844 kb on + strand, within BACOVA_00905 at 37.844 kb on + strand, within BACOVA_00905 at 37.844 kb on + strand, within BACOVA_00905 at 37.844 kb on + strand, within BACOVA_00905 at 37.844 kb on + strand, within BACOVA_00905 at 37.845 kb on - strand, within BACOVA_00905 at 37.845 kb on - strand, within BACOVA_00905 at 37.845 kb on - strand, within BACOVA_00905 at 37.845 kb on - strand, within BACOVA_00905 at 37.878 kb on + strand, within BACOVA_00905 at 37.904 kb on + strand, within BACOVA_00905 at 37.904 kb on + strand, within BACOVA_00905 at 37.905 kb on - strand, within BACOVA_00905 at 37.905 kb on - strand, within BACOVA_00905 at 37.910 kb on + strand, within BACOVA_00905 at 37.910 kb on + strand, within BACOVA_00905 at 37.911 kb on - strand, within BACOVA_00905 at 37.936 kb on + strand, within BACOVA_00905 at 37.937 kb on - strand, within BACOVA_00905 at 37.986 kb on + strand, within BACOVA_00905 at 37.986 kb on + strand, within BACOVA_00905 at 37.989 kb on - strand, within BACOVA_00905 at 38.032 kb on - strand, within BACOVA_00905 at 38.071 kb on + strand, within BACOVA_00905 at 38.072 kb on - strand, within BACOVA_00905 at 38.072 kb on - strand, within BACOVA_00905 at 38.108 kb on - strand, within BACOVA_00905 at 38.110 kb on + strand, within BACOVA_00905 at 38.114 kb on + strand, within BACOVA_00905 at 38.124 kb on + strand, within BACOVA_00905 at 38.124 kb on + strand, within BACOVA_00905 at 38.125 kb on - strand, within BACOVA_00905 at 38.128 kb on - strand, within BACOVA_00905 at 38.131 kb on - strand, within BACOVA_00905 at 38.154 kb on - strand, within BACOVA_00905 at 38.167 kb on + strand, within BACOVA_00905 at 38.168 kb on - strand, within BACOVA_00905 at 38.212 kb on + strand, within BACOVA_00905 at 38.235 kb on + strand at 38.256 kb on - strand at 38.281 kb on + strand at 38.285 kb on - strand at 38.294 kb on + strand at 38.295 kb on - strand at 38.321 kb on + strand at 38.322 kb on - strand at 38.323 kb on + strand at 38.323 kb on + strand at 38.324 kb on - strand at 38.324 kb on - strand at 38.324 kb on - strand at 38.357 kb on + strand at 38.378 kb on + strand at 38.390 kb on - strand at 38.391 kb on + strand at 38.395 kb on + strand at 38.451 kb on + strand at 38.466 kb on - strand at 38.466 kb on - strand at 38.486 kb on - strand at 38.547 kb on - strand at 38.560 kb on - strand at 38.562 kb on + strand at 38.563 kb on - strand at 38.630 kb on - strand at 38.630 kb on - strand at 38.696 kb on - strand at 38.724 kb on - strand, within BACOVA_00906 at 38.733 kb on - strand, within BACOVA_00906 at 38.767 kb on + strand, within BACOVA_00906 at 38.767 kb on + strand, within BACOVA_00906 at 38.785 kb on + strand, within BACOVA_00906 at 38.785 kb on + strand, within BACOVA_00906 at 38.799 kb on - strand, within BACOVA_00906 at 38.859 kb on + strand, within BACOVA_00906 at 38.905 kb on + strand, within BACOVA_00906 at 38.917 kb on + strand, within BACOVA_00906 at 38.918 kb on - strand, within BACOVA_00906 at 38.918 kb on - strand, within BACOVA_00906 at 38.922 kb on - strand, within BACOVA_00906 at 38.922 kb on - strand, within BACOVA_00906 at 38.922 kb on - strand, within BACOVA_00906 at 38.935 kb on - strand, within BACOVA_00906 at 38.957 kb on + strand, within BACOVA_00906 at 39.010 kb on + strand, within BACOVA_00906 at 39.025 kb on - strand, within BACOVA_00906 at 39.028 kb on + strand, within BACOVA_00906 at 39.028 kb on + strand, within BACOVA_00906 at 39.028 kb on + strand, within BACOVA_00906 at 39.029 kb on - strand, within BACOVA_00906 at 39.029 kb on - strand, within BACOVA_00906 at 39.039 kb on + strand, within BACOVA_00906 at 39.039 kb on + strand, within BACOVA_00906 at 39.039 kb on + strand, within BACOVA_00906 at 39.069 kb on - strand, within BACOVA_00906 at 39.088 kb on + strand, within BACOVA_00906 at 39.089 kb on - strand, within BACOVA_00906 at 39.172 kb on + strand, within BACOVA_00906 at 39.199 kb on + strand, within BACOVA_00906 at 39.199 kb on + strand, within BACOVA_00906 at 39.234 kb on - strand, within BACOVA_00906 at 39.276 kb on - strand, within BACOVA_00906 at 39.280 kb on + strand, within BACOVA_00906
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose 10 mM (C) remove 36,360 + BACOVA_00904 0.56 -0.0 36,427 + BACOVA_00904 0.59 -0.2 36,463 - BACOVA_00904 0.61 -0.9 36,477 + BACOVA_00904 0.62 +0.2 36,482 + BACOVA_00904 0.62 -0.7 36,507 + BACOVA_00904 0.64 +0.8 36,508 - BACOVA_00904 0.64 +0.6 36,548 + BACOVA_00904 0.66 -1.2 36,692 - BACOVA_00904 0.73 -0.8 36,777 + BACOVA_00904 0.77 +0.0 36,778 - BACOVA_00904 0.78 +1.1 36,781 + BACOVA_00904 0.78 -0.2 36,781 + BACOVA_00904 0.78 +0.7 36,781 + BACOVA_00904 0.78 -1.1 36,782 - BACOVA_00904 0.78 -1.7 36,788 - BACOVA_00904 0.78 -0.3 36,828 + BACOVA_00904 0.80 -2.0 36,833 - BACOVA_00904 0.80 -1.3 36,833 - BACOVA_00904 0.80 -2.0 36,866 - BACOVA_00904 0.82 +0.3 36,866 - BACOVA_00904 0.82 -0.6 36,866 - BACOVA_00904 0.82 -0.1 36,866 - BACOVA_00904 0.82 -0.4 36,893 + BACOVA_00904 0.83 -0.5 36,893 + BACOVA_00904 0.83 -0.6 36,893 + BACOVA_00904 0.83 -0.0 36,893 + BACOVA_00904 0.83 +2.0 36,895 + BACOVA_00904 0.84 -0.7 36,895 + BACOVA_00904 0.84 -1.4 36,895 + BACOVA_00904 0.84 +1.0 36,896 - BACOVA_00904 0.84 -1.1 36,899 - BACOVA_00904 0.84 -1.2 36,902 - BACOVA_00904 0.84 +1.7 36,904 + BACOVA_00904 0.84 +0.1 36,911 - BACOVA_00904 0.84 +0.4 36,923 + BACOVA_00904 0.85 -0.5 36,952 + BACOVA_00904 0.87 +0.6 37,085 - -0.4 37,085 - +0.6 37,085 - +1.1 37,085 - -0.7 37,103 - -0.4 37,174 + -0.4 37,214 - -1.7 37,224 - -1.0 37,279 + -0.5 37,283 - +0.7 37,307 + +0.9 37,319 + -0.1 37,319 + -0.9 37,329 + -0.0 37,330 - -0.5 37,330 - -1.3 37,344 - -0.3 37,401 + -1.1 37,402 - -1.0 37,410 - -0.5 37,419 + -0.1 37,474 - BACOVA_00905 0.15 -1.1 37,483 + BACOVA_00905 0.16 -0.9 37,484 - BACOVA_00905 0.16 -0.3 37,513 + BACOVA_00905 0.19 -1.1 37,513 + BACOVA_00905 0.19 +0.6 37,514 - BACOVA_00905 0.19 +0.0 37,514 - BACOVA_00905 0.19 +0.0 37,514 - BACOVA_00905 0.19 +0.1 37,515 + BACOVA_00905 0.19 -0.2 37,515 + BACOVA_00905 0.19 -0.9 37,516 - BACOVA_00905 0.19 +0.1 37,521 + BACOVA_00905 0.19 -0.6 37,522 - BACOVA_00905 0.20 -0.0 37,540 + BACOVA_00905 0.21 -0.9 37,543 + BACOVA_00905 0.22 -2.5 37,543 + BACOVA_00905 0.22 +0.2 37,544 - BACOVA_00905 0.22 +0.4 37,555 + BACOVA_00905 0.23 -2.0 37,566 + BACOVA_00905 0.24 +0.6 37,576 + BACOVA_00905 0.25 +1.1 37,614 - BACOVA_00905 0.29 -0.3 37,651 + BACOVA_00905 0.33 +0.2 37,651 + BACOVA_00905 0.33 +0.2 37,652 - BACOVA_00905 0.33 -0.8 37,722 + BACOVA_00905 0.40 -0.5 37,723 - BACOVA_00905 0.40 -0.5 37,728 - BACOVA_00905 0.40 +0.1 37,734 - BACOVA_00905 0.41 -0.6 37,754 + BACOVA_00905 0.43 +0.1 37,754 + BACOVA_00905 0.43 -0.3 37,764 + BACOVA_00905 0.44 -0.2 37,769 - BACOVA_00905 0.45 -0.3 37,781 + BACOVA_00905 0.46 -0.2 37,840 + BACOVA_00905 0.52 -0.5 37,840 + BACOVA_00905 0.52 -0.3 37,840 + BACOVA_00905 0.52 -1.4 37,844 + BACOVA_00905 0.52 -0.5 37,844 + BACOVA_00905 0.52 +0.9 37,844 + BACOVA_00905 0.52 -0.5 37,844 + BACOVA_00905 0.52 -0.1 37,844 + BACOVA_00905 0.52 -1.2 37,845 - BACOVA_00905 0.52 -0.6 37,845 - BACOVA_00905 0.52 -0.5 37,845 - BACOVA_00905 0.52 -0.1 37,845 - BACOVA_00905 0.52 +1.8 37,878 + BACOVA_00905 0.56 -2.6 37,904 + BACOVA_00905 0.58 -0.8 37,904 + BACOVA_00905 0.58 +1.6 37,905 - BACOVA_00905 0.58 -1.0 37,905 - BACOVA_00905 0.58 -0.4 37,910 + BACOVA_00905 0.59 -1.4 37,910 + BACOVA_00905 0.59 +0.9 37,911 - BACOVA_00905 0.59 -0.8 37,936 + BACOVA_00905 0.61 -0.2 37,937 - BACOVA_00905 0.62 +0.6 37,986 + BACOVA_00905 0.66 +0.9 37,986 + BACOVA_00905 0.66 -0.8 37,989 - BACOVA_00905 0.67 -0.5 38,032 - BACOVA_00905 0.71 -0.4 38,071 + BACOVA_00905 0.75 -0.0 38,072 - BACOVA_00905 0.75 +0.4 38,072 - BACOVA_00905 0.75 -0.7 38,108 - BACOVA_00905 0.79 -1.2 38,110 + BACOVA_00905 0.79 -1.0 38,114 + BACOVA_00905 0.79 -1.4 38,124 + BACOVA_00905 0.80 -0.8 38,124 + BACOVA_00905 0.80 -0.3 38,125 - BACOVA_00905 0.81 -0.5 38,128 - BACOVA_00905 0.81 +0.4 38,131 - BACOVA_00905 0.81 -0.7 38,154 - BACOVA_00905 0.83 +0.3 38,167 + BACOVA_00905 0.85 -0.0 38,168 - BACOVA_00905 0.85 -0.5 38,212 + BACOVA_00905 0.89 +0.1 38,235 + -0.1 38,256 - -0.2 38,281 + +0.9 38,285 - +0.8 38,294 + +0.4 38,295 - -2.9 38,321 + -1.1 38,322 - -0.0 38,323 + -1.7 38,323 + +0.0 38,324 - -0.7 38,324 - +0.3 38,324 - -0.4 38,357 + -1.3 38,378 + -0.1 38,390 - +0.1 38,391 + +0.0 38,395 + -0.1 38,451 + +1.7 38,466 - -0.9 38,466 - -0.2 38,486 - -0.2 38,547 - -0.1 38,560 - +0.8 38,562 + -0.9 38,563 - +0.6 38,630 - +0.6 38,630 - -0.3 38,696 - -0.6 38,724 - BACOVA_00906 0.11 +0.0 38,733 - BACOVA_00906 0.12 -1.4 38,767 + BACOVA_00906 0.14 +0.5 38,767 + BACOVA_00906 0.14 -0.0 38,785 + BACOVA_00906 0.15 -0.2 38,785 + BACOVA_00906 0.15 -0.1 38,799 - BACOVA_00906 0.16 +1.1 38,859 + BACOVA_00906 0.20 +0.2 38,905 + BACOVA_00906 0.23 -0.9 38,917 + BACOVA_00906 0.24 +0.1 38,918 - BACOVA_00906 0.24 -0.2 38,918 - BACOVA_00906 0.24 -0.5 38,922 - BACOVA_00906 0.25 +0.2 38,922 - BACOVA_00906 0.25 -0.4 38,922 - BACOVA_00906 0.25 -2.1 38,935 - BACOVA_00906 0.25 -1.0 38,957 + BACOVA_00906 0.27 -0.5 39,010 + BACOVA_00906 0.31 -0.1 39,025 - BACOVA_00906 0.32 -1.5 39,028 + BACOVA_00906 0.32 -1.0 39,028 + BACOVA_00906 0.32 -0.5 39,028 + BACOVA_00906 0.32 +0.0 39,029 - BACOVA_00906 0.32 +1.2 39,029 - BACOVA_00906 0.32 +1.6 39,039 + BACOVA_00906 0.33 -0.5 39,039 + BACOVA_00906 0.33 -0.2 39,039 + BACOVA_00906 0.33 +0.1 39,069 - BACOVA_00906 0.35 -0.6 39,088 + BACOVA_00906 0.36 +1.1 39,089 - BACOVA_00906 0.36 +1.7 39,172 + BACOVA_00906 0.42 +0.2 39,199 + BACOVA_00906 0.43 -0.2 39,199 + BACOVA_00906 0.43 +0.1 39,234 - BACOVA_00906 0.46 +0.3 39,276 - BACOVA_00906 0.49 +0.8 39,280 + BACOVA_00906 0.49 +0.2
Or see this region's nucleotide sequence