Experiment: R2A_PIPES pH 4.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_07680 and ccoS overlap by 4 nucleotides ccoS and OKGIIK_07690 overlap by 104 nucleotides
OKGIIK_07680: OKGIIK_07680 - ATPase P, at 1,696,852 to 1,699,110
_07680
OKGIIK_07685: ccoS - cbb3-type cytochrome oxidase assembly protein CcoS, at 1,699,107 to 1,699,349
ccoS
OKGIIK_07690: OKGIIK_07690 - Acetyl-CoA hydrolase, at 1,699,246 to 1,701,243
_07690
Position (kb)
1699
1700 Strain fitness (log2 ratio)
-2
-1
0
1 at 1699.747 kb on + strand, within OKGIIK_07690 at 1699.748 kb on + strand, within OKGIIK_07690 at 1699.748 kb on + strand, within OKGIIK_07690 at 1699.749 kb on - strand, within OKGIIK_07690 at 1699.749 kb on - strand, within OKGIIK_07690 at 1699.749 kb on - strand, within OKGIIK_07690 at 1699.749 kb on - strand, within OKGIIK_07690 at 1699.799 kb on + strand, within OKGIIK_07690 at 1699.907 kb on + strand, within OKGIIK_07690 at 1699.907 kb on + strand, within OKGIIK_07690 at 1699.907 kb on + strand, within OKGIIK_07690 at 1699.907 kb on + strand, within OKGIIK_07690 at 1699.908 kb on - strand, within OKGIIK_07690 at 1699.908 kb on - strand, within OKGIIK_07690 at 1699.908 kb on - strand, within OKGIIK_07690 at 1699.908 kb on - strand, within OKGIIK_07690 at 1699.908 kb on - strand, within OKGIIK_07690 at 1699.908 kb on - strand, within OKGIIK_07690 at 1699.908 kb on - strand, within OKGIIK_07690 at 1699.908 kb on - strand, within OKGIIK_07690 at 1700.048 kb on + strand, within OKGIIK_07690 at 1700.049 kb on - strand, within OKGIIK_07690 at 1700.126 kb on + strand, within OKGIIK_07690 at 1700.126 kb on + strand, within OKGIIK_07690 at 1700.126 kb on + strand, within OKGIIK_07690 at 1700.127 kb on - strand, within OKGIIK_07690 at 1700.127 kb on - strand, within OKGIIK_07690 at 1700.127 kb on - strand, within OKGIIK_07690 at 1700.165 kb on + strand, within OKGIIK_07690 at 1700.165 kb on + strand, within OKGIIK_07690 at 1700.165 kb on + strand, within OKGIIK_07690 at 1700.165 kb on + strand, within OKGIIK_07690 at 1700.165 kb on + strand, within OKGIIK_07690 at 1700.165 kb on + strand, within OKGIIK_07690 at 1700.166 kb on - strand, within OKGIIK_07690 at 1700.166 kb on - strand, within OKGIIK_07690 at 1700.306 kb on + strand, within OKGIIK_07690
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES pH 4.5 remove 1,699,747 + OKGIIK_07690 0.25 -1.3 1,699,748 + OKGIIK_07690 0.25 -1.0 1,699,748 + OKGIIK_07690 0.25 -1.3 1,699,749 - OKGIIK_07690 0.25 -0.0 1,699,749 - OKGIIK_07690 0.25 -1.5 1,699,749 - OKGIIK_07690 0.25 +1.0 1,699,749 - OKGIIK_07690 0.25 +0.6 1,699,799 + OKGIIK_07690 0.28 +0.4 1,699,907 + OKGIIK_07690 0.33 +0.1 1,699,907 + OKGIIK_07690 0.33 -0.3 1,699,907 + OKGIIK_07690 0.33 -0.9 1,699,907 + OKGIIK_07690 0.33 -0.8 1,699,908 - OKGIIK_07690 0.33 +0.0 1,699,908 - OKGIIK_07690 0.33 -0.6 1,699,908 - OKGIIK_07690 0.33 +1.1 1,699,908 - OKGIIK_07690 0.33 +0.6 1,699,908 - OKGIIK_07690 0.33 +1.4 1,699,908 - OKGIIK_07690 0.33 +1.0 1,699,908 - OKGIIK_07690 0.33 +1.0 1,699,908 - OKGIIK_07690 0.33 -0.9 1,700,048 + OKGIIK_07690 0.40 -1.2 1,700,049 - OKGIIK_07690 0.40 -1.4 1,700,126 + OKGIIK_07690 0.44 +1.3 1,700,126 + OKGIIK_07690 0.44 -0.3 1,700,126 + OKGIIK_07690 0.44 +0.4 1,700,127 - OKGIIK_07690 0.44 +0.7 1,700,127 - OKGIIK_07690 0.44 +0.1 1,700,127 - OKGIIK_07690 0.44 +0.6 1,700,165 + OKGIIK_07690 0.46 -1.8 1,700,165 + OKGIIK_07690 0.46 +1.0 1,700,165 + OKGIIK_07690 0.46 -0.7 1,700,165 + OKGIIK_07690 0.46 +0.8 1,700,165 + OKGIIK_07690 0.46 +0.4 1,700,165 + OKGIIK_07690 0.46 +0.2 1,700,166 - OKGIIK_07690 0.46 +0.2 1,700,166 - OKGIIK_07690 0.46 -0.3 1,700,306 + OKGIIK_07690 0.53 -0.3
Or see this region's nucleotide sequence