Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05445

Experiment: R2A_PIPES pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.5
1,193,302	+		OKGIIK_05440	0.57	+0.5
1,193,391	-		OKGIIK_05440	0.63	-2.0
1,193,391	-		OKGIIK_05440	0.63	-0.3
1,193,441	+		OKGIIK_05440	0.66	-2.1
1,193,441	+		OKGIIK_05440	0.66	-0.2
1,193,441	+		OKGIIK_05440	0.66	-1.6
1,193,442	-		OKGIIK_05440	0.66	-1.2
1,193,507	+		OKGIIK_05440	0.71	-0.1
1,193,507	+		OKGIIK_05440	0.71	+0.4
1,193,508	-		OKGIIK_05440	0.71	+3.4
1,193,508	-		OKGIIK_05440	0.71	+0.2
1,193,508	-		OKGIIK_05440	0.71	+0.1
1,193,508	-		OKGIIK_05440	0.71	-0.6
1,193,600	+		OKGIIK_05440	0.77	-0.5
1,193,692	-		OKGIIK_05440	0.84	+0.2
1,193,815	+				+0.7
1,193,815	+				-1.6
1,193,816	-				-0.2
1,193,816	-				-0.9
1,193,816	-				-1.5
1,193,861	+				-1.0
1,193,862	-				-0.4
1,193,862	-				+1.3
1,193,862	-				-0.6
1,193,862	-				+1.3
1,193,862	-				+0.1
1,193,946	+				-1.8
1,193,946	+				-0.5
1,193,946	+				-0.4
1,193,946	+				+1.0
1,193,947	-				+0.5
1,194,033	+				+0.9
1,194,033	+				+0.2
1,194,033	+				-1.1
1,194,033	+				+1.0
1,194,033	+				-0.8
1,194,033	+				+0.4
1,194,034	-				-1.9
1,194,034	-				-0.3
1,194,075	+				-2.1
1,194,075	+				+0.2
1,194,075	+				+0.4
1,194,076	-				-0.3
1,194,076	-				-0.6
1,194,076	-				+0.1
1,194,076	-				-0.5
1,194,193	-				-0.6
1,194,229	+				+0.0
1,194,229	+				-1.1
1,194,230	-				-1.1
1,194,342	+				-0.3
1,194,342	+				-0.3
1,194,342	+				-1.8
1,194,342	+				-0.6
1,194,342	+				-1.1
1,194,343	-				+1.3
1,194,343	-				+0.8
1,194,343	-				+0.4
1,194,343	-				+1.7
1,194,343	-				+0.1
1,194,343	-				-1.1
1,194,343	-				-0.9
1,194,343	-				+0.9
1,194,343	-				+0.5
1,194,352	-				+1.3
1,194,387	+				-0.4
1,194,388	-				-0.3
1,194,428	+		OKGIIK_05445	0.12	+1.7
1,194,466	+		OKGIIK_05445	0.15	+1.7
1,194,526	+		OKGIIK_05445	0.18	-1.3
1,194,526	+		OKGIIK_05445	0.18	-1.2
1,194,526	+		OKGIIK_05445	0.18	-0.1
1,194,527	-		OKGIIK_05445	0.19	-1.0
1,194,527	-		OKGIIK_05445	0.19	-0.2
1,194,527	-		OKGIIK_05445	0.19	+0.4
1,194,527	-		OKGIIK_05445	0.19	+0.1
1,194,527	-		OKGIIK_05445	0.19	-0.1
1,194,527	-		OKGIIK_05445	0.19	-0.3
1,194,527	-		OKGIIK_05445	0.19	-1.3
1,194,529	+		OKGIIK_05445	0.19	-0.0
1,194,529	+		OKGIIK_05445	0.19	-0.7
1,194,529	+		OKGIIK_05445	0.19	-0.4
1,194,529	+		OKGIIK_05445	0.19	+0.6
1,194,530	-		OKGIIK_05445	0.19	-0.0
1,194,530	-		OKGIIK_05445	0.19	+0.8
1,194,582	+		OKGIIK_05445	0.22	-0.4
1,194,600	+		OKGIIK_05445	0.23	-0.3
1,194,601	-		OKGIIK_05445	0.23	-0.1
1,194,601	-		OKGIIK_05445	0.23	-1.6
1,194,601	-		OKGIIK_05445	0.23	-1.9
1,194,703	+		OKGIIK_05445	0.30	+0.3
1,194,703	+		OKGIIK_05445	0.30	+1.4
1,194,704	-		OKGIIK_05445	0.30	-0.1
1,194,704	-		OKGIIK_05445	0.30	-1.2
1,194,739	+		OKGIIK_05445	0.32	-0.3
1,194,739	+		OKGIIK_05445	0.32	-1.3
1,194,740	-		OKGIIK_05445	0.32	-0.1
1,194,916	+		OKGIIK_05445	0.44	+0.9
1,194,916	+		OKGIIK_05445	0.44	-0.5
1,194,916	+		OKGIIK_05445	0.44	+0.1
1,194,917	-		OKGIIK_05445	0.44	-0.2
1,194,917	-		OKGIIK_05445	0.44	+1.4
1,194,960	+		OKGIIK_05445	0.47	-2.5
1,194,960	+		OKGIIK_05445	0.47	+0.2
1,194,960	+		OKGIIK_05445	0.47	-0.3
1,194,960	+		OKGIIK_05445	0.47	-0.3
1,194,960	+		OKGIIK_05445	0.47	+0.8
1,194,960	+		OKGIIK_05445	0.47	+0.1
1,194,960	+		OKGIIK_05445	0.47	+0.2
1,194,960	+		OKGIIK_05445	0.47	+1.7
1,194,960	+		OKGIIK_05445	0.47	-1.8
1,194,961	-		OKGIIK_05445	0.47	-2.3
1,194,961	-		OKGIIK_05445	0.47	-0.3
1,194,961	-		OKGIIK_05445	0.47	-1.1
1,194,961	-		OKGIIK_05445	0.47	+1.2
1,195,005	+		OKGIIK_05445	0.50	+2.0
1,195,005	+		OKGIIK_05445	0.50	-0.7
1,195,005	+		OKGIIK_05445	0.50	-0.6
1,195,005	+		OKGIIK_05445	0.50	+0.1
1,195,005	+		OKGIIK_05445	0.50	-0.9
1,195,005	+		OKGIIK_05445	0.50	-0.1
1,195,005	+		OKGIIK_05445	0.50	-0.3
1,195,006	-		OKGIIK_05445	0.50	-0.9
1,195,100	+		OKGIIK_05445	0.56	-0.9
1,195,100	+		OKGIIK_05445	0.56	-0.7
1,195,108	+		OKGIIK_05445	0.56	-1.0
1,195,108	+		OKGIIK_05445	0.56	-0.3
1,195,109	-		OKGIIK_05445	0.56	-0.5
1,195,291	+		OKGIIK_05445	0.68	+0.8
1,195,292	-		OKGIIK_05445	0.68	-0.8
1,195,324	+		OKGIIK_05445	0.71	+0.0
1,195,325	-		OKGIIK_05445	0.71	-1.5
1,195,335	+		OKGIIK_05445	0.71	+1.1
1,195,335	+		OKGIIK_05445	0.71	-0.5
1,195,335	+		OKGIIK_05445	0.71	+0.5
1,195,335	+		OKGIIK_05445	0.71	-0.3
1,195,335	+		OKGIIK_05445	0.71	+0.8
1,195,335	+		OKGIIK_05445	0.71	+0.6
1,195,335	+		OKGIIK_05445	0.71	-0.6
1,195,335	+		OKGIIK_05445	0.71	+0.1
1,195,335	+		OKGIIK_05445	0.71	-0.3
1,195,335	+		OKGIIK_05445	0.71	+1.0
1,195,335	+		OKGIIK_05445	0.71	+0.4
1,195,335	+		OKGIIK_05445	0.71	-0.9
1,195,335	+		OKGIIK_05445	0.71	+0.9
1,195,335	+		OKGIIK_05445	0.71	-2.1
1,195,335	+		OKGIIK_05445	0.71	-0.2
1,195,335	+		OKGIIK_05445	0.71	+1.4
1,195,335	+		OKGIIK_05445	0.71	-1.3
1,195,335	+		OKGIIK_05445	0.71	-2.0
1,195,335	+		OKGIIK_05445	0.71	-1.6
1,195,335	+		OKGIIK_05445	0.71	-0.1
1,195,336	-		OKGIIK_05445	0.71	-0.1
1,195,336	-		OKGIIK_05445	0.71	+0.7
1,195,336	-		OKGIIK_05445	0.71	-0.3
1,195,336	-		OKGIIK_05445	0.71	+1.3
1,195,336	-		OKGIIK_05445	0.71	+0.2
1,195,336	-		OKGIIK_05445	0.71	+0.4
1,195,336	-		OKGIIK_05445	0.71	-0.5
1,195,336	-		OKGIIK_05445	0.71	-2.5
1,195,336	-		OKGIIK_05445	0.71	-1.0
1,195,336	-		OKGIIK_05445	0.71	-0.6
1,195,336	-		OKGIIK_05445	0.71	+0.6
1,195,336	-		OKGIIK_05445	0.71	+0.4
1,195,336	-		OKGIIK_05445	0.71	+2.2
1,195,351	+		OKGIIK_05445	0.72	+0.5
1,195,351	+		OKGIIK_05445	0.72	+0.5
1,195,351	+		OKGIIK_05445	0.72	+0.4
1,195,351	+		OKGIIK_05445	0.72	-0.3
1,195,351	+		OKGIIK_05445	0.72	-1.8
1,195,351	+		OKGIIK_05445	0.72	-1.3
1,195,352	-		OKGIIK_05445	0.72	+0.5
1,195,352	-		OKGIIK_05445	0.72	+0.7
1,195,352	-		OKGIIK_05445	0.72	-1.1
1,195,352	-		OKGIIK_05445	0.72	+0.2
1,195,352	-		OKGIIK_05445	0.72	-0.0
1,195,352	-		OKGIIK_05445	0.72	-2.5
1,195,396	+		OKGIIK_05445	0.75	-0.8
1,195,397	-		OKGIIK_05445	0.75	-0.4
1,195,397	-		OKGIIK_05445	0.75	-0.3
1,195,498	+		OKGIIK_05445	0.82	-1.7
1,195,498	+		OKGIIK_05445	0.82	-0.7
1,195,499	-		OKGIIK_05445	0.82	-0.3
1,195,499	-		OKGIIK_05445	0.82	+1.1
1,195,540	+		OKGIIK_05445	0.85	-0.0
1,195,540	+		OKGIIK_05445	0.85	-0.6
1,195,540	+		OKGIIK_05445	0.85	-0.8
1,195,540	+		OKGIIK_05445	0.85	+0.1
1,195,541	-		OKGIIK_05445	0.85	+0.3
1,195,541	-		OKGIIK_05445	0.85	+0.2
1,195,541	-		OKGIIK_05445	0.85	-1.3
1,195,541	-		OKGIIK_05445	0.85	+0.3
1,195,541	-		OKGIIK_05445	0.85	+0.2
1,195,572	+		OKGIIK_05445	0.87	-1.5
1,195,572	+		OKGIIK_05445	0.87	-2.0
1,195,573	-		OKGIIK_05445	0.87	-0.7
1,195,671	+				+0.4
1,195,671	+				-0.9
1,195,671	+				-1.8
1,195,671	+				-0.3
1,195,672	-				+0.5
1,195,672	-				-0.6
1,195,690	+				-0.1
1,195,690	+				+1.0
1,195,736	+				+1.6
1,195,736	+				+1.0
1,195,736	+				-0.3
1,195,736	+				+0.5
1,195,736	+				-0.6
1,195,736	+				-0.7
1,195,736	+				-1.0
1,195,737	-				+1.7
1,195,737	-				-0.9
1,195,737	-				-1.1
1,195,737	-				+0.1
1,195,737	-				+1.3
1,195,737	-				-0.2
1,195,737	-				+0.7
1,195,737	-				+0.7
1,195,737	-				+0.5
1,195,737	-				+2.2
1,195,737	-				+1.9
1,195,737	-				-0.3
1,195,737	-				-0.9
1,195,737	-				-0.7
1,195,737	-				-1.3
1,195,737	-				-1.1
1,195,737	-				-1.5
1,195,737	-				+0.1
1,195,737	-				+2.0
1,195,737	-				+1.2
1,195,737	-				+0.4
1,195,737	-				+1.9
1,195,812	+		OKGIIK_05450	0.15	-1.2
1,195,812	+		OKGIIK_05450	0.15	-0.7
1,195,813	-		OKGIIK_05450	0.15	-0.3
1,195,813	-		OKGIIK_05450	0.15	-1.3
1,196,016	-		OKGIIK_05450	0.89	-1.4
1,196,016	-		OKGIIK_05450	0.89	+1.7
1,196,035	+				+1.3
1,196,035	+				-0.6
1,196,035	+				+1.1
1,196,036	-				-1.6
1,196,036	-				+0.4
1,196,083	+		OKGIIK_05455	0.18	+0.8
1,196,263	+		OKGIIK_05455	0.82	+0.0
1,196,264	-		OKGIIK_05455	0.82	+0.9
1,196,264	-		OKGIIK_05455	0.82	-0.6
1,196,299	+				-0.6
1,196,299	+				-0.3
1,196,299	+				+0.1
1,196,300	-				+1.2
1,196,300	-				+0.4
1,196,335	+				+0.2
1,196,336	-				+1.0
1,196,380	+				+2.3
1,196,381	-				+0.3
1,196,392	+				+1.3
1,196,393	-				+0.7
1,196,410	+				-0.4
1,196,410	+				-0.1
1,196,410	+				-0.9
1,196,410	+				+0.4
1,196,411	-				-0.6
1,196,411	-				-0.3
1,196,411	-				-2.4
1,196,411	-				-0.1
1,196,411	-				+0.9
1,196,411	-				-0.8
1,196,497	+				-0.1
1,196,497	+				-0.8
1,196,497	+				-1.4
1,196,497	+				-0.6
1,196,497	+				+0.9
1,196,497	+				-0.4
1,196,497	+				+0.1
1,196,498	-				-1.1
1,196,498	-				-1.1
1,196,498	-				-1.5
1,196,498	-				-2.0
1,196,588	-		OKGIIK_05460	0.12	-1.1
1,196,588	-		OKGIIK_05460	0.12	-2.0
1,196,644	+		OKGIIK_05460	0.14	+1.1
1,196,644	+		OKGIIK_05460	0.14	+0.1
1,196,644	+		OKGIIK_05460	0.14	-0.3
1,196,644	+		OKGIIK_05460	0.14	+1.0
1,196,644	+		OKGIIK_05460	0.14	+0.3
1,196,644	+		OKGIIK_05460	0.14	+0.7
1,196,645	-		OKGIIK_05460	0.14	+0.4
1,196,645	-		OKGIIK_05460	0.14	-1.0
1,196,645	-		OKGIIK_05460	0.14	+1.1
1,196,645	-		OKGIIK_05460	0.14	+0.4
1,196,645	-		OKGIIK_05460	0.14	+0.9
1,196,645	-		OKGIIK_05460	0.14	+2.3
1,196,645	-		OKGIIK_05460	0.14	+0.9
1,196,645	-		OKGIIK_05460	0.14	+0.7
1,196,645	-		OKGIIK_05460	0.14	-0.1
1,196,645	-		OKGIIK_05460	0.14	-0.5
1,196,645	-		OKGIIK_05460	0.14	-0.9
1,196,651	+		OKGIIK_05460	0.15	-1.3
1,196,652	-		OKGIIK_05460	0.15	-0.4
1,196,685	-		OKGIIK_05460	0.16	-0.3
1,196,685	-		OKGIIK_05460	0.16	-0.2
1,196,686	+		OKGIIK_05460	0.16	-0.3
1,196,687	-		OKGIIK_05460	0.16	-2.1
1,196,770	+		OKGIIK_05460	0.20	+0.6
1,196,770	+		OKGIIK_05460	0.20	-0.8
1,196,770	+		OKGIIK_05460	0.20	-1.1
1,196,770	+		OKGIIK_05460	0.20	+0.5
1,196,770	+		OKGIIK_05460	0.20	+2.1
1,196,770	+		OKGIIK_05460	0.20	-0.0
1,196,771	-		OKGIIK_05460	0.20	-0.6
1,196,771	-		OKGIIK_05460	0.20	-0.3
1,196,771	-		OKGIIK_05460	0.20	-0.2
1,196,771	-		OKGIIK_05460	0.20	-2.0
1,196,771	-		OKGIIK_05460	0.20	+0.0
1,196,771	-		OKGIIK_05460	0.20	-0.3
1,196,771	-		OKGIIK_05460	0.20	+0.9
1,196,771	-		OKGIIK_05460	0.20	-0.8
1,196,771	-		OKGIIK_05460	0.20	+0.1
1,196,771	-		OKGIIK_05460	0.20	-0.0
1,196,771	-		OKGIIK_05460	0.20	-0.6
1,196,771	-		OKGIIK_05460	0.20	-1.1
1,196,771	-		OKGIIK_05460	0.20	+0.4
1,196,771	-		OKGIIK_05460	0.20	-1.6