Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3024 and GFF3025 are separated by 336 nucleotides GFF3025 and GFF3026 overlap by 4 nucleotides
GFF3024 - hypothetical protein, at 411,277 to 424,479
GFF3024
GFF3025 - Nuclease SbcCD subunit D, at 424,816 to 426,060
GFF3025
GFF3026 - hypothetical protein, at 426,057 to 429,698
GFF3026
Position (kb) 424
425
426
427 Strain fitness (log2 ratio) -1
0
1 at 423.831 kb on + strand at 423.832 kb on - strand at 424.005 kb on - strand at 424.043 kb on - strand at 424.217 kb on + strand at 424.218 kb on - strand at 424.464 kb on - strand at 424.481 kb on + strand at 424.481 kb on + strand at 424.481 kb on + strand at 424.481 kb on + strand at 424.481 kb on + strand at 424.482 kb on - strand at 424.482 kb on - strand at 424.482 kb on - strand at 424.482 kb on - strand at 424.482 kb on - strand at 424.482 kb on - strand at 424.482 kb on - strand at 424.580 kb on + strand at 424.580 kb on + strand at 424.580 kb on + strand at 424.640 kb on - strand at 424.640 kb on - strand at 425.005 kb on + strand, within GFF3025 at 425.005 kb on + strand, within GFF3025 at 425.006 kb on - strand, within GFF3025 at 425.124 kb on + strand, within GFF3025 at 425.125 kb on - strand, within GFF3025 at 425.288 kb on - strand, within GFF3025 at 425.288 kb on - strand, within GFF3025 at 425.482 kb on + strand, within GFF3025 at 425.482 kb on + strand, within GFF3025 at 425.482 kb on + strand, within GFF3025 at 425.483 kb on - strand, within GFF3025 at 425.483 kb on - strand, within GFF3025 at 425.483 kb on - strand, within GFF3025 at 425.483 kb on - strand, within GFF3025 at 425.873 kb on - strand, within GFF3025 at 425.873 kb on - strand, within GFF3025 at 425.978 kb on - strand at 425.978 kb on - strand at 426.336 kb on + strand at 426.495 kb on + strand, within GFF3026 at 426.645 kb on + strand, within GFF3026 at 426.646 kb on - strand, within GFF3026 at 426.646 kb on - strand, within GFF3026
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 423,831 + +0.5 423,832 - +0.1 424,005 - +1.3 424,043 - +0.2 424,217 + +0.8 424,218 - -0.5 424,464 - -1.0 424,481 + -0.4 424,481 + +0.2 424,481 + -0.0 424,481 + -0.6 424,481 + -1.0 424,482 - -0.9 424,482 - +0.6 424,482 - -0.6 424,482 - -1.0 424,482 - -0.4 424,482 - +0.6 424,482 - -0.8 424,580 + -0.2 424,580 + +0.6 424,580 + +1.0 424,640 - -0.8 424,640 - +0.8 425,005 + GFF3025 0.15 -0.4 425,005 + GFF3025 0.15 +0.5 425,006 - GFF3025 0.15 +0.5 425,124 + GFF3025 0.25 -0.6 425,125 - GFF3025 0.25 -0.2 425,288 - GFF3025 0.38 +0.6 425,288 - GFF3025 0.38 -0.4 425,482 + GFF3025 0.53 -0.2 425,482 + GFF3025 0.53 +1.1 425,482 + GFF3025 0.53 +0.6 425,483 - GFF3025 0.54 -0.3 425,483 - GFF3025 0.54 -0.0 425,483 - GFF3025 0.54 +1.3 425,483 - GFF3025 0.54 -0.5 425,873 - GFF3025 0.85 -0.4 425,873 - GFF3025 0.85 +0.5 425,978 - +0.6 425,978 - -0.2 426,336 + +0.4 426,495 + GFF3026 0.12 -0.3 426,645 + GFF3026 0.16 -1.2 426,646 - GFF3026 0.16 +0.2 426,646 - GFF3026 0.16 -1.2
Or see this region's nucleotide sequence