Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2095 and GFF2096 overlap by 4 nucleotides GFF2096 and GFF2097 are separated by 4 nucleotides
GFF2095 - hypothetical protein, at 343,526 to 345,292
GFF2095
GFF2096 - hypothetical protein, at 345,289 to 346,524
GFF2096
GFF2097 - hypothetical protein, at 346,529 to 347,578
GFF2097
Position (kb) 345
346
347 Strain fitness (log2 ratio) -2
-1
0
1 at 344.479 kb on + strand, within GFF2095 at 344.480 kb on - strand, within GFF2095 at 344.545 kb on - strand, within GFF2095 at 345.148 kb on + strand at 346.319 kb on + strand, within GFF2096 at 346.319 kb on + strand, within GFF2096 at 346.319 kb on + strand, within GFF2096 at 346.319 kb on + strand, within GFF2096 at 346.320 kb on - strand, within GFF2096 at 346.320 kb on - strand, within GFF2096 at 346.320 kb on - strand, within GFF2096 at 346.420 kb on + strand at 346.420 kb on + strand at 346.570 kb on + strand at 346.570 kb on + strand at 346.571 kb on - strand at 346.577 kb on + strand at 346.675 kb on - strand, within GFF2097 at 346.711 kb on - strand, within GFF2097 at 346.904 kb on + strand, within GFF2097 at 346.905 kb on - strand, within GFF2097 at 347.319 kb on + strand, within GFF2097 at 347.319 kb on + strand, within GFF2097 at 347.320 kb on - strand, within GFF2097 at 347.363 kb on + strand, within GFF2097 at 347.363 kb on + strand, within GFF2097 at 347.363 kb on + strand, within GFF2097 at 347.364 kb on - strand, within GFF2097 at 347.411 kb on - strand, within GFF2097 at 347.480 kb on + strand at 347.481 kb on - strand at 347.481 kb on - strand at 347.481 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 344,479 + GFF2095 0.54 -0.4 344,480 - GFF2095 0.54 -0.6 344,545 - GFF2095 0.58 +0.8 345,148 + +1.0 346,319 + GFF2096 0.83 +0.7 346,319 + GFF2096 0.83 -0.3 346,319 + GFF2096 0.83 +0.0 346,319 + GFF2096 0.83 -0.6 346,320 - GFF2096 0.83 -0.1 346,320 - GFF2096 0.83 +0.9 346,320 - GFF2096 0.83 -0.1 346,420 + +0.1 346,420 + -0.1 346,570 + -0.7 346,570 + +0.9 346,571 - -1.1 346,577 + +0.3 346,675 - GFF2097 0.14 +0.2 346,711 - GFF2097 0.17 +0.1 346,904 + GFF2097 0.36 -0.8 346,905 - GFF2097 0.36 +0.3 347,319 + GFF2097 0.75 +0.3 347,319 + GFF2097 0.75 +0.4 347,320 - GFF2097 0.75 +0.6 347,363 + GFF2097 0.79 -2.1 347,363 + GFF2097 0.79 +0.4 347,363 + GFF2097 0.79 +0.1 347,364 - GFF2097 0.80 -0.0 347,411 - GFF2097 0.84 +1.0 347,480 + -0.2 347,481 - +0.5 347,481 - +0.1 347,481 - +0.4
Or see this region's nucleotide sequence