Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2074 and GFF2075 overlap by 4 nucleotides GFF2075 and GFF2076 are separated by 143 nucleotides GFF2076 and GFF2077 are separated by 116 nucleotides
GFF2074 - Cell division protein FtsB, at 324,908 to 325,186
GFF2074
GFF2075 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 325,183 to 325,890
GFF2075
GFF2076 - HTH-type transcriptional regulator DmlR, at 326,034 to 326,930
GFF2076
GFF2077 - S-(hydroxymethyl)glutathione dehydrogenase, at 327,047 to 328,159
GFF2077
Position (kb) 326
327 Strain fitness (log2 ratio) -2
-1
0
1
2 at 326.045 kb on - strand at 326.209 kb on + strand, within GFF2076 at 326.210 kb on - strand, within GFF2076 at 326.210 kb on - strand, within GFF2076 at 326.210 kb on - strand, within GFF2076 at 326.212 kb on + strand, within GFF2076 at 326.213 kb on - strand, within GFF2076 at 326.413 kb on + strand, within GFF2076 at 326.414 kb on - strand, within GFF2076 at 326.434 kb on + strand, within GFF2076 at 326.434 kb on + strand, within GFF2076 at 326.434 kb on + strand, within GFF2076 at 326.435 kb on - strand, within GFF2076 at 326.606 kb on + strand, within GFF2076 at 326.606 kb on + strand, within GFF2076 at 326.607 kb on - strand, within GFF2076 at 326.756 kb on + strand, within GFF2076 at 326.757 kb on - strand, within GFF2076 at 326.757 kb on - strand, within GFF2076 at 326.757 kb on - strand, within GFF2076 at 326.777 kb on - strand, within GFF2076 at 326.946 kb on - strand at 326.953 kb on + strand at 326.954 kb on - strand at 326.998 kb on + strand at 326.998 kb on + strand at 327.182 kb on + strand, within GFF2077 at 327.182 kb on + strand, within GFF2077 at 327.183 kb on - strand, within GFF2077 at 327.183 kb on - strand, within GFF2077 at 327.311 kb on + strand, within GFF2077 at 327.312 kb on - strand, within GFF2077 at 327.428 kb on + strand, within GFF2077 at 327.428 kb on + strand, within GFF2077 at 327.429 kb on - strand, within GFF2077 at 327.429 kb on - strand, within GFF2077 at 327.452 kb on + strand, within GFF2077 at 327.453 kb on - strand, within GFF2077 at 327.453 kb on - strand, within GFF2077 at 327.453 kb on - strand, within GFF2077 at 327.640 kb on + strand, within GFF2077 at 327.641 kb on - strand, within GFF2077 at 327.641 kb on - strand, within GFF2077 at 327.661 kb on - strand, within GFF2077
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 326,045 - -0.6 326,209 + GFF2076 0.20 -0.8 326,210 - GFF2076 0.20 -0.5 326,210 - GFF2076 0.20 +0.1 326,210 - GFF2076 0.20 -1.8 326,212 + GFF2076 0.20 -0.5 326,213 - GFF2076 0.20 +0.1 326,413 + GFF2076 0.42 +0.5 326,414 - GFF2076 0.42 -0.1 326,434 + GFF2076 0.45 -1.5 326,434 + GFF2076 0.45 -0.5 326,434 + GFF2076 0.45 -0.1 326,435 - GFF2076 0.45 +0.9 326,606 + GFF2076 0.64 +0.5 326,606 + GFF2076 0.64 -1.1 326,607 - GFF2076 0.64 +0.8 326,756 + GFF2076 0.80 -0.6 326,757 - GFF2076 0.81 +0.3 326,757 - GFF2076 0.81 -0.2 326,757 - GFF2076 0.81 +0.1 326,777 - GFF2076 0.83 +0.1 326,946 - +0.5 326,953 + -0.9 326,954 - +0.9 326,998 + +0.4 326,998 + -0.1 327,182 + GFF2077 0.12 +0.1 327,182 + GFF2077 0.12 -1.2 327,183 - GFF2077 0.12 +0.4 327,183 - GFF2077 0.12 +0.1 327,311 + GFF2077 0.24 -0.5 327,312 - GFF2077 0.24 +0.4 327,428 + GFF2077 0.34 -0.2 327,428 + GFF2077 0.34 -0.4 327,429 - GFF2077 0.34 +0.1 327,429 - GFF2077 0.34 -0.6 327,452 + GFF2077 0.36 +0.3 327,453 - GFF2077 0.36 +0.1 327,453 - GFF2077 0.36 +0.2 327,453 - GFF2077 0.36 +1.8 327,640 + GFF2077 0.53 -0.0 327,641 - GFF2077 0.53 +1.5 327,641 - GFF2077 0.53 -1.1 327,661 - GFF2077 0.55 +0.8
Or see this region's nucleotide sequence